Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-237
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 164

Conread position: 1-237
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 76, 55

Conread position: 1-249
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 171

Conread position: 1-254
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 78, 143

Conread position: 1-254
Cow position:
Alignm length: 270
Alignm identity: 200
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 83, 178

Conread position: 1-256
Cow position:
Alignm length: 270
Alignm identity: 206
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 76, 50

Conread position: 1-259
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 80, 155

Conread position: 1-263
Cow position:
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 107

Conread position: 1-263
Cow position:
Alignm length: 282
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 76, 177

Conread position: 1-263
Cow position:
Alignm length: 283
Alignm identity: 211
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 14, 136

Conread position: 1-267
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 78, 179

Conread position: 1-268
Cow position:
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 43

Conread position: 1-268
Cow position:
Alignm length: 287
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 181

Conread position: 1-268
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 77, 184

Conread position: 1-269
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 54, 168

Conread position: 1-270
Cow position:
Alignm length: 283
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 17

Conread position: 1-308
Cow position:
Alignm length: 328
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 76, 90

Conread position: 1-311
Cow position:
Alignm length: 347
Alignm identity: 256
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 80, 12

Conread position: 1-346
Cow position:
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 176

Conread position: 1-433
Cow position:
Alignm length: 460
Alignm identity: 313
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 75, 127

Conread position: 1-453
Cow position:
Alignm length: 477
Alignm identity: 314
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 76, 170

Conread position: 1-455
Cow position:
Alignm length: 486
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 109

Conread position: 1-461
Cow position:
Alignm length: 484
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 136

Conread position: 1-461
Cow position:
Alignm length: 499
Alignm identity: 339
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 79, 34

Conread position: 1-478
Cow position:
Alignm length: 518
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 150

Conread position: 1-483
Cow position:
Alignm length: 529
Alignm identity: 357
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 76, 179

Conread position: 1-485
Cow position:
Alignm length: 522
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 148

Conread position: 1-485
Cow position:
Alignm length: 503
Alignm identity: 325
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 104, 66

Conread position: 1-486
Cow position:
Alignm length: 525
Alignm identity: 346
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 76, 180

Conread position: 1-486
Cow position:
Alignm length: 518
Alignm identity: 341
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 117

Conread position: 1-489
Cow position:
Alignm length: 531
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-489
Cow position:
Alignm length: 520
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 60

Conread position: 1-491
Cow position:
Alignm length: 537
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 22

Conread position: 1-491
Cow position:
Alignm length: 512
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 22

Conread position: 1-491
Cow position:
Alignm length: 525
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 179

Conread position: 1-493
Cow position:
Alignm length: 513
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 179

Conread position: 1-493
Cow position:
Alignm length: 528
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 175

Conread position: 1-493
Cow position:
Alignm length: 528
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 179

Conread position: 2-220
Cow position:
Alignm length: 229
Alignm identity: 179
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 75, 179

Conread position: 2-268
Cow position:
Alignm length: 287
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 14

Conread position: 2-491
Cow position:
Alignm length: 526
Alignm identity: 336
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 21

Conread position: 3-262
Cow position:
Alignm length: 278
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 74, 146

Conread position: 3-263
Cow position:
Alignm length: 291
Alignm identity: 212
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 68

Conread position: 3-268
Cow position:
Alignm length: 282
Alignm identity: 200
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 70, 54

Conread position: 3-268
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 74, 173

Conread position: 4-261
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 73, 92

Conread position: 4-455
Cow position:
Alignm length: 458
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 104

Conread position: 4-493
Cow position:
Alignm length: 523
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 175

Conread position: 7-263
Cow position:
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 73, 154

Conread position: 8-249
Cow position:
Alignm length: 267
Alignm identity: 191
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 149

Conread position: 8-253
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 69, 130

Conread position: 8-433
Cow position:
Alignm length: 469
Alignm identity: 324
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 76, 171

Conread position: 8-433
Cow position:
Alignm length: 453
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 171

Conread position: 9-433
Cow position:
Alignm length: 450
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 144

Conread position: 10-240
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 67, 169

Conread position: 12-486
Cow position:
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 165

Conread position: 15-258
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 48

Conread position: 20-268
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 157

Conread position: 27-485
Cow position:
Alignm length: 498
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 156

Conread position: 27-494
Cow position:
Alignm length: 507
Alignm identity: 347
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 51, 65

Conread position: 30-252
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 100

Conread position: 30-497
Cow position:
Alignm length: 487
Alignm identity: 330
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 8

Conread position: 36-263
Cow position:
Alignm length: 249
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 144

Conread position: 44-256
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 33, 135

Conread position: 50-453
Cow position:
Alignm length: 423
Alignm identity: 288
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 108

Conread position: 61-262
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 116

Conread position: 63-268
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 114

Conread position: 75-268
Cow position:
Alignm length: 212
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 47

Conread position: 75-268
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 77

Conread position: 75-491
Cow position:
Alignm length: 435
Alignm identity: 288
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 51

Conread position: 75-493
Cow position:
Alignm length: 455
Alignm identity: 304
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 29, 100

Conread position: 81-417
Cow position:
Alignm length: 359
Alignm identity: 242
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 14

Conread position: 83-252
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 68

Conread position: 85-447
Cow position:
Alignm length: 386
Alignm identity: 255
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 7

Conread position: 87-487
Cow position:
Alignm length: 438
Alignm identity: 305
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 18, 85

Conread position: 91-220
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 83

Conread position: 91-486
Cow position:
Alignm length: 425
Alignm identity: 284
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 16, 86

Conread position: 93-447
Cow position:
Alignm length: 380
Alignm identity: 249
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 195

Conread position: 94-491
Cow position:
Alignm length: 426
Alignm identity: 292
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 63, 15

Conread position: 97-491
Cow position:
Alignm length: 429
Alignm identity: 290
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 60, 25

Conread position: 99-483
Cow position:
Alignm length: 420
Alignm identity: 275
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 74

Conread position: 103-256
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 103-494
Cow position:
Alignm length: 413
Alignm identity: 282
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 52, 68

Conread position: 104-404
Cow position:
Alignm length: 317
Alignm identity: 222
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 49, 70

Conread position: 109-211
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 65

Conread position: 109-263
Cow position:
Alignm length: 164
Alignm identity: 131
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 40, 66

Conread position: 109-268
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 68

Conread position: 109-279
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 66

Conread position: 109-492
Cow position:
Alignm length: 399
Alignm identity: 264
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 46, 70

Conread position: 109-493
Cow position:
Alignm length: 414
Alignm identity: 282
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 49

Conread position: 112-387
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 62

Conread position: 115-460
Cow position:
Alignm length: 368
Alignm identity: 250
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 96, 56

Conread position: 116-489
Cow position:
Alignm length: 401
Alignm identity: 279
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 59

Conread position: 116-491
Cow position:
Alignm length: 404
Alignm identity: 279
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 40, 58

Conread position: 116-491
Cow position:
Alignm length: 408
Alignm identity: 264
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 58

Conread position: 118-427
Cow position:
Alignm length: 344
Alignm identity: 239
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 56

Conread position: 118-470
Cow position:
Alignm length: 372
Alignm identity: 240
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 56

Conread position: 118-478
Cow position:
Alignm length: 375
Alignm identity: 245
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 5, 56

Conread position: 118-487
Cow position:
Alignm length: 406
Alignm identity: 286
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 39, 56

Conread position: 119-464
Cow position:
Alignm length: 357
Alignm identity: 244
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 56

Conread position: 120-488
Cow position:
Alignm length: 392
Alignm identity: 265
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 37, 54

Conread position: 122-256
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 52

Conread position: 130-455
Cow position:
Alignm length: 352
Alignm identity: 237
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 46

Conread position: 139-268
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 35

Conread position: 142-488
Cow position:
Alignm length: 378
Alignm identity: 255
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 29

Conread position: 143-493
Cow position:
Alignm length: 387
Alignm identity: 256
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 207

Conread position: 153-268
Cow position:
Alignm length: 125
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 18

Conread position: 153-493
Cow position:
Alignm length: 364
Alignm identity: 243
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 117, 18

Conread position: 158-497
Cow position:
Alignm length: 354
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 13

Conread position: 199-491
Cow position:
Alignm length: 306
Alignm identity: 201
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 7

Conread position: 204-493
Cow position:
Alignm length: 293
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 65

Conread position: 221-486
Cow position:
Alignm length: 273
Alignm identity: 178
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 30

Conread position: 236-484
Cow position:
Alignm length: 258
Alignm identity: 170
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 13

Conread position: 243-491
Cow position:
Alignm length: 254
Alignm identity: 167
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 22

Conread position: 252-480
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 76

Conread position: 252-493
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 82

Conread position: 261-465
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 18

Conread position: 262-457
Cow position:
Alignm length: 200
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 262-488
Cow position:
Alignm length: 230
Alignm identity: 154
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 54

Conread position: 262-489
Cow position:
Alignm length: 234
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 86

Conread position: 262-492
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 30, 77

Conread position: 262-493
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 49

Conread position: 262-493
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 72

Conread position: 262-493
Cow position:
Alignm length: 236
Alignm identity: 155
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 53

Conread position: 262-496
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 262-497
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 30, 83

Conread position: 263-491
Cow position:
Alignm length: 232
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 76

Conread position: 263-493
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 48

Conread position: 263-493
Cow position:
Alignm length: 236
Alignm identity: 155
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 57

Conread position: 265-491
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 51

Show alignments to all cow chromosomes.