Cow genome map

Conread name: rcbe16_h13.y1

Conread position: 1-210
Cow position:
Alignm length: 218
Alignm identity: 173
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 76, 179

Conread position: 1-211
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 175

Conread position: 1-220
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 75, 27

Conread position: 1-253
Cow position:
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 76, 55

Conread position: 1-256
Cow position:
Alignm length: 272
Alignm identity: 206
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 74, 107

Conread position: 1-256
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 79, 180

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 83, 152

Conread position: 1-262
Cow position:
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 1-263
Cow position:
Alignm length: 283
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 22

Conread position: 1-263
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 74, 67

Conread position: 1-263
Cow position:
Alignm length: 283
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 91, 179

Conread position: 1-267
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 76, 191

Conread position: 1-268
Cow position:
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 70

Conread position: 1-268
Cow position:
Alignm length: 285
Alignm identity: 212
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 76, 180

Conread position: 1-268
Cow position:
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-268
Cow position:
Alignm length: 287
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 103

Conread position: 1-268
Cow position:
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 151

Conread position: 1-272
Cow position:
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 103

Conread position: 1-316
Cow position:
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 178

Conread position: 1-362
Cow position:
Alignm length: 383
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 179

Conread position: 1-363
Cow position:
Alignm length: 389
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-436
Cow position:
Alignm length: 460
Alignm identity: 311
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 76, 151

Conread position: 1-436
Cow position:
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 156

Conread position: 1-471
Cow position:
Alignm length: 494
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 1-478
Cow position:
Alignm length: 502
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 181

Conread position: 1-481
Cow position:
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 174

Conread position: 1-482
Cow position:
Alignm length: 508
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 150

Conread position: 1-484
Cow position:
Alignm length: 500
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 22

Conread position: 1-484
Cow position:
Alignm length: 529
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 190

Conread position: 1-485
Cow position:
Alignm length: 512
Alignm identity: 342
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 129, 80

Conread position: 1-485
Cow position:
Alignm length: 513
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 16

Conread position: 1-488
Cow position:
Alignm length: 521
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 55

Conread position: 1-489
Cow position:
Alignm length: 524
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 178

Conread position: 1-489
Cow position:
Alignm length: 514
Alignm identity: 339
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 21

Conread position: 1-491
Cow position:
Alignm length: 521
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 178

Conread position: 1-491
Cow position:
Alignm length: 536
Alignm identity: 366
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 76, 53

Conread position: 1-491
Cow position:
Alignm length: 517
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 107

Conread position: 1-491
Cow position:
Alignm length: 524
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 68

Conread position: 1-493
Cow position:
Alignm length: 519
Alignm identity: 343
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 71, 176

Conread position: 1-493
Cow position:
Alignm length: 527
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 148

Conread position: 1-494
Cow position:
Alignm length: 523
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 1-497
Cow position:
Alignm length: 513
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 141

Conread position: 2-211
Cow position:
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 121

Conread position: 2-263
Cow position:
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 10

Conread position: 2-465
Cow position:
Alignm length: 491
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 149

Conread position: 2-486
Cow position:
Alignm length: 517
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 120

Conread position: 2-493
Cow position:
Alignm length: 524
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 112

Conread position: 3-268
Cow position:
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 175

Conread position: 3-269
Cow position:
Alignm length: 283
Alignm identity: 194
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 3-274
Cow position:
Alignm length: 294
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 139

Conread position: 3-279
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 77, 175

Conread position: 4-253
Cow position:
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 22

Conread position: 4-268
Cow position:
Alignm length: 276
Alignm identity: 187
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 73, 13

Conread position: 4-493
Cow position:
Alignm length: 516
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 173

Conread position: 5-486
Cow position:
Alignm length: 508
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 61

Conread position: 6-491
Cow position:
Alignm length: 508
Alignm identity: 334
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 151, 75

Conread position: 7-264
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 175

Conread position: 7-492
Cow position:
Alignm length: 521
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 173

Conread position: 8-256
Cow position:
Alignm length: 269
Alignm identity: 203
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 69, 173

Conread position: 8-486
Cow position:
Alignm length: 517
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 168

Conread position: 8-497
Cow position:
Alignm length: 536
Alignm identity: 358
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 69, 174

Conread position: 9-282
Cow position:
Alignm length: 284
Alignm identity: 210
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 71, 106

Conread position: 9-493
Cow position:
Alignm length: 521
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 170

Conread position: 18-493
Cow position:
Alignm length: 495
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 158

Conread position: 19-492
Cow position:
Alignm length: 506
Alignm identity: 337
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 160

Conread position: 20-493
Cow position:
Alignm length: 498
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 109

Conread position: 23-268
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 54, 30

Conread position: 25-262
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 165

Conread position: 28-261
Cow position:
Alignm length: 251
Alignm identity: 192
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 148

Conread position: 28-263
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 61

Conread position: 33-491
Cow position:
Alignm length: 479
Alignm identity: 314
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 109

Conread position: 56-252
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 62-268
Cow position:
Alignm length: 223
Alignm identity: 177
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 16, 68

Conread position: 73-436
Cow position:
Alignm length: 395
Alignm identity: 277
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 69, 103

Conread position: 75-237
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 82, 96

Conread position: 75-268
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 23, 73

Conread position: 75-275
Cow position:
Alignm length: 217
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 20

Conread position: 75-478
Cow position:
Alignm length: 433
Alignm identity: 302
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 67, 100

Conread position: 75-493
Cow position:
Alignm length: 437
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 92

Conread position: 83-254
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 19

Conread position: 83-268
Cow position:
Alignm length: 190
Alignm identity: 148
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 139, 52

Conread position: 85-268
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 91

Conread position: 86-485
Cow position:
Alignm length: 428
Alignm identity: 287
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 91

Conread position: 93-493
Cow position:
Alignm length: 428
Alignm identity: 285
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 17, 82

Conread position: 97-491
Cow position:
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 78

Conread position: 99-493
Cow position:
Alignm length: 422
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 75

Conread position: 101-260
Cow position:
Alignm length: 168
Alignm identity: 137
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 56, 73

Conread position: 107-278
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 67

Conread position: 108-263
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 72

Conread position: 109-269
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 68

Conread position: 109-269
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 9

Conread position: 109-483
Cow position:
Alignm length: 412
Alignm identity: 275
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 65

Conread position: 109-491
Cow position:
Alignm length: 402
Alignm identity: 264
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 48, 64

Conread position: 110-387
Cow position:
Alignm length: 309
Alignm identity: 217
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 37

Conread position: 110-491
Cow position:
Alignm length: 420
Alignm identity: 283
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 61

Conread position: 111-263
Cow position:
Alignm length: 170
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 62

Conread position: 112-493
Cow position:
Alignm length: 405
Alignm identity: 274
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 21

Conread position: 115-263
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 40

Conread position: 115-477
Cow position:
Alignm length: 389
Alignm identity: 256
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 89, 40

Conread position: 118-488
Cow position:
Alignm length: 403
Alignm identity: 278
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 40, 56

Conread position: 118-493
Cow position:
Alignm length: 403
Alignm identity: 280
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 39, 56

Conread position: 119-460
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 14

Conread position: 120-493
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 54

Conread position: 121-263
Cow position:
Alignm length: 151
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 92, 26

Conread position: 125-265
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 49

Conread position: 125-311
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 32, 49

Conread position: 125-491
Cow position:
Alignm length: 376
Alignm identity: 249
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 32, 49

Conread position: 127-268
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 47

Conread position: 129-477
Cow position:
Alignm length: 371
Alignm identity: 262
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 28, 45

Conread position: 130-493
Cow position:
Alignm length: 399
Alignm identity: 279
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 12, 44

Conread position: 141-493
Cow position:
Alignm length: 379
Alignm identity: 254
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 33

Conread position: 143-375
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 28

Conread position: 153-407
Cow position:
Alignm length: 271
Alignm identity: 186
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 52, 18

Conread position: 153-433
Cow position:
Alignm length: 294
Alignm identity: 202
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 60, 18

Conread position: 173-491
Cow position:
Alignm length: 330
Alignm identity: 221
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 87

Conread position: 175-404
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 175-491
Cow position:
Alignm length: 332
Alignm identity: 213
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 29

Conread position: 176-493
Cow position:
Alignm length: 343
Alignm identity: 233
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 190

Conread position: 258-493
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 65

Conread position: 262-461
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 74

Conread position: 262-471
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 70

Conread position: 262-473
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 66

Conread position: 262-484
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 30, 71

Conread position: 262-486
Cow position:
Alignm length: 228
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 40

Conread position: 262-486
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 67

Conread position: 262-489
Cow position:
Alignm length: 232
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 27, 52

Conread position: 262-491
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 44

Conread position: 262-491
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 67

Conread position: 262-493
Cow position:
Alignm length: 235
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 77

Conread position: 262-493
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 76

Conread position: 262-493
Cow position:
Alignm length: 235
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 40

Conread position: 262-493
Cow position:
Alignm length: 235
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 54

Conread position: 262-493
Cow position:
Alignm length: 236
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 69

Conread position: 262-493
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 68

Conread position: 262-497
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 43

Conread position: 264-486
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 59

Conread position: 264-491
Cow position:
Alignm length: 232
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 156

Conread position: 266-491
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 40

Conread position: 267-491
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 24, 55

Conread position: 284-486
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 58

Conread position: 342-491
Cow position:
Alignm length: 150
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.