Cow genome map
| Conread name: | rcbe16_h13.y1 |
| Conread position: | 1-210 |
| Cow position: | chrX:32871140-32870925 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 76, 179 |
| Conread position: | 1-211 |
| Cow position: | chrX:41846888-41846671 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 76, 175 |
| Conread position: | 1-220 |
| Cow position: | chrX:41433773-41433552 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 1-253 |
| Cow position: | chrX:21749812-21749553 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 76, 55 |
| Conread position: | 1-256 |
| Cow position: | chrX:10438005-10437747 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 74, 107 |
| Conread position: | 1-256 |
| Cow position: | chrX:22873043-22873318 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 79, 180 |
| Conread position: | 1-256 |
| Cow position: | chrX:35937423-35937163 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 83, 152 |
| Conread position: | 1-262 |
| Cow position: | chrX:36250216-36249940 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 175 |
| Conread position: | 1-263 |
| Cow position: | chrX:17271642-17271363 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 83, 22 |
| Conread position: | 1-263 |
| Cow position: | chrX:42507998-42507723 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 74, 67 |
| Conread position: | 1-263 |
| Cow position: | chrX:48370742-48371022 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 91, 179 |
| Conread position: | 1-267 |
| Cow position: | chrX:32128348-32128058 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 76, 191 |
| Conread position: | 1-268 |
| Cow position: | chrX:7381970-7382251 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 70 |
| Conread position: | 1-268 |
| Cow position: | chrX:15007505-15007222 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 76, 180 |
| Conread position: | 1-268 |
| Cow position: | chrX:37843366-37843650 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 178 |
| Conread position: | 1-268 |
| Cow position: | chrX:38072121-38071837 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 103 |
| Conread position: | 1-268 |
| Cow position: | chrX:41743559-41743839 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 151 |
| Conread position: | 1-272 |
| Cow position: | chrX:25283494-25283219 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 103 |
| Conread position: | 1-316 |
| Cow position: | chrX:42994260-42994609 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 178 |
| Conread position: | 1-362 |
| Cow position: | chrX:126437-126811 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 64, 179 |
| Conread position: | 1-363 |
| Cow position: | chrX:17497742-17498125 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 178 |
| Conread position: | 1-436 |
| Cow position: | chrX:37072052-37072502 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 311 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 76, 151 |
| Conread position: | 1-436 |
| Cow position: | chrX:38936345-38936813 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 156 |
| Conread position: | 1-471 |
| Cow position: | chrX:28847230-28846739 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 175 |
| Conread position: | 1-478 |
| Cow position: | chrX:35388261-35387771 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 181 |
| Conread position: | 1-481 |
| Cow position: | chrX:38963757-38964266 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 174 |
| Conread position: | 1-482 |
| Cow position: | chrX:878724-878221 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 150 |
| Conread position: | 1-484 |
| Cow position: | chrX:35268539-35269022 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 1-484 |
| Cow position: | chrX:37489364-37489877 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 190 |
| Conread position: | 1-485 |
| Cow position: | chrX:13177811-13177312 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 342 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 129, 80 |
| Conread position: | 1-485 |
| Cow position: | chrX:15147535-15147034 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 1-488 |
| Cow position: | chrX:31250038-31250553 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 55 |
| Conread position: | 1-489 |
| Cow position: | chrX:6543902-6544418 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 178 |
| Conread position: | 1-489 |
| Cow position: | chrX:34376600-34377104 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 339 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 1-491 |
| Cow position: | chrX:4633205-4632687 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 178 |
| Conread position: | 1-491 |
| Cow position: | chrX:14599182-14599700 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 366 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 76, 53 |
| Conread position: | 1-491 |
| Cow position: | chrX:17794641-17795147 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 107 |
| Conread position: | 1-491 |
| Cow position: | chrX:34554381-34554891 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 68 |
| Conread position: | 1-493 |
| Cow position: | chrX:8869739-8869235 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 343 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 71, 176 |
| Conread position: | 1-493 |
| Cow position: | chrX:34441801-34441284 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 148 |
| Conread position: | 1-494 |
| Cow position: | chrX:27446337-27446857 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 175 |
| Conread position: | 1-497 |
| Cow position: | chrX:22115636-22115142 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 141 |
| Conread position: | 2-211 |
| Cow position: | chrX:9651398-9651183 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 121 |
| Conread position: | 2-263 |
| Cow position: | chrX:27516181-27516451 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 10 |
| Conread position: | 2-465 |
| Cow position: | chrX:31443173-31442687 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 149 |
| Conread position: | 2-486 |
| Cow position: | chrX:5017759-5017260 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 120 |
| Conread position: | 2-493 |
| Cow position: | chrX:42247529-42247012 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 112 |
| Conread position: | 3-268 |
| Cow position: | chrX:39556168-39555904 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 175 |
| Conread position: | 3-269 |
| Cow position: | chrX:35633105-35632823 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 3-274 |
| Cow position: | chrX:45043206-45043497 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 139 |
| Conread position: | 3-279 |
| Cow position: | chrX:47967248-47967538 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 77, 175 |
| Conread position: | 4-253 |
| Cow position: | chrX:24105276-24105539 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 22 |
| Conread position: | 4-268 |
| Cow position: | chrX:24200849-24201113 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 4-493 |
| Cow position: | chrX:31729107-31729606 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 173 |
| Conread position: | 5-486 |
| Cow position: | chrX:7695414-7695911 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 6-491 |
| Cow position: | chrX:15596696-15597195 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 334 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 151, 75 |
| Conread position: | 7-264 |
| Cow position: | chrX:48248473-48248749 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 175 |
| Conread position: | 7-492 |
| Cow position: | chrX:34238372-34238891 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 173 |
| Conread position: | 8-256 |
| Cow position: | chrX:46771319-46771052 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 69, 173 |
| Conread position: | 8-486 |
| Cow position: | chrX:21592939-21593452 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 168 |
| Conread position: | 8-497 |
| Cow position: | chrX:1055740-1055208 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 358 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 69, 174 |
| Conread position: | 9-282 |
| Cow position: | chrX:47379813-47379535 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 71, 106 |
| Conread position: | 9-493 |
| Cow position: | chrX:20340237-20339724 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 170 |
| Conread position: | 18-493 |
| Cow position: | chrX:15545560-15546051 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 158 |
| Conread position: | 19-492 |
| Cow position: | chrX:38007104-38006603 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 337 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 58, 160 |
| Conread position: | 20-493 |
| Cow position: | chrX:12290402-12290887 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 109 |
| Conread position: | 23-268 |
| Cow position: | chrX:6234766-6234525 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 25-262 |
| Cow position: | chrX:35681005-35681260 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 53, 165 |
| Conread position: | 28-261 |
| Cow position: | chrX:42855084-42855333 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 49, 148 |
| Conread position: | 28-263 |
| Cow position: | chrX:25337850-25338105 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 52, 61 |
| Conread position: | 33-491 |
| Cow position: | chrX:36311277-36311738 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 47, 109 |
| Conread position: | 56-252 |
| Cow position: | chrX:35273045-35273268 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 62-268 |
| Cow position: | chrX:25237885-25238104 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 73-436 |
| Cow position: | chrX:8925426-8925812 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 277 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 69, 103 |
| Conread position: | 75-237 |
| Cow position: | chrX:35041944-35042108 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 82, 96 |
| Conread position: | 75-268 |
| Cow position: | chrX:9997609-9997408 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 75-275 |
| Cow position: | chrX:4269345-4269132 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 75-478 |
| Cow position: | chrX:37836311-37836733 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 302 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 67, 100 |
| Conread position: | 75-493 |
| Cow position: | chrX:31294818-31294400 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 92 |
| Conread position: | 83-254 |
| Cow position: | chrX:7496979-7497157 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 83-268 |
| Cow position: | chrX:34270146-34270329 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 139, 52 |
| Conread position: | 85-268 |
| Cow position: | chrX:42874710-42874911 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 86-485 |
| Cow position: | chrX:40183617-40183193 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 93-493 |
| Cow position: | chrX:9635439-9635020 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 285 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 17, 82 |
| Conread position: | 97-491 |
| Cow position: | chrX:27509273-27508857 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 78 |
| Conread position: | 99-493 |
| Cow position: | chrX:25816147-25815730 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 75 |
| Conread position: | 101-260 |
| Cow position: | chrX:45787405-45787571 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 107-278 |
| Cow position: | chrX:678811-678630 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 108-263 |
| Cow position: | chrX:35284375-35284542 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 109-269 |
| Cow position: | chrX:1514645-1514478 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 109-269 |
| Cow position: | chrX:19930416-19930584 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 109-483 |
| Cow position: | chrX:9416934-9416524 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 65 |
| Conread position: | 109-491 |
| Cow position: | chrX:21663068-21663462 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 110-387 |
| Cow position: | chrX:26876121-26875817 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 110-491 |
| Cow position: | chrX:21672311-21672729 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 47, 61 |
| Conread position: | 111-263 |
| Cow position: | chrX:17662838-17662671 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 112-493 |
| Cow position: | chrX:42492748-42492352 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 115-263 |
| Cow position: | chrX:20752028-20752177 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 107, 40 |
| Conread position: | 115-477 |
| Cow position: | chrX:27772191-27771814 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 40 |
| Conread position: | 118-488 |
| Cow position: | chrX:38549216-38549612 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 118-493 |
| Cow position: | chrX:34543555-34543954 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 280 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 119-460 |
| Cow position: | chrX:37910222-37910581 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 120-493 |
| Cow position: | chrX:42381330-42380941 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 121-263 |
| Cow position: | chrX:18812029-18812176 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 92, 26 |
| Conread position: | 125-265 |
| Cow position: | chrX:29509669-29509520 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 125-311 |
| Cow position: | chrX:31745272-31745071 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 125-491 |
| Cow position: | chrX:1465962-1466327 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 127-268 |
| Cow position: | chrX:6488363-6488504 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 129-477 |
| Cow position: | chrX:23091660-23092027 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 130-493 |
| Cow position: | chrX:29602053-29601660 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 141-493 |
| Cow position: | chrX:9425951-9425580 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 143-375 |
| Cow position: | chrX:18195737-18195974 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 118, 28 |
| Conread position: | 153-407 |
| Cow position: | chrX:43973364-43973629 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 153-433 |
| Cow position: | chrX:16996312-16996602 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 173-491 |
| Cow position: | chrX:27145447-27145766 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 5, 87 |
| Conread position: | 175-404 |
| Cow position: | chrX:22465782-22466037 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 175-491 |
| Cow position: | chrX:4279276-4278951 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 176-493 |
| Cow position: | chrX:6407376-6407713 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 50, 190 |
| Conread position: | 258-493 |
| Cow position: | chrX:27228063-27228298 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 65 |
| Conread position: | 262-461 |
| Cow position: | chrX:38728677-38728872 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 262-471 |
| Cow position: | chrX:5872260-5872465 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 70 |
| Conread position: | 262-473 |
| Cow position: | chrX:29050186-29050398 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 262-484 |
| Cow position: | chrX:6278561-6278337 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 30, 71 |
| Conread position: | 262-486 |
| Cow position: | chrX:9365736-9365513 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 262-486 |
| Cow position: | chrX:42855394-42855621 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 262-489 |
| Cow position: | chrX:35885788-35885559 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 262-491 |
| Cow position: | chrX:12095834-12095604 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 262-491 |
| Cow position: | chrX:40680550-40680782 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 262-493 |
| Cow position: | chrX:20168497-20168727 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 262-493 |
| Cow position: | chrX:27174935-27175168 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 262-493 |
| Cow position: | chrX:27705526-27705756 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 262-493 |
| Cow position: | chrX:31489459-31489690 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 262-493 |
| Cow position: | chrX:41027095-41027329 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 262-493 |
| Cow position: | chrX:46532562-46532321 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 262-497 |
| Cow position: | chrX:12309446-12309212 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 264-486 |
| Cow position: | chrX:29680319-29680099 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 264-491 |
| Cow position: | chrX:24365884-24365655 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 156 |
| Conread position: | 266-491 |
| Cow position: | chrX:44054750-44054970 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 267-491 |
| Cow position: | chrX:44192505-44192276 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 284-486 |
| Cow position: | chrX:37129231-37129432 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 58 |
| Conread position: | 342-491 |
| Cow position: | chrX:42449995-42449846 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.