Cow genome map
| Conread name: | rcbl0_005862.y1 |
| Conread position: | 19-282 |
| Cow position: | chr1:39224692-39224957 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 33-250 |
| Cow position: | chr1:6731414-6731181 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 16, 142 |
| Conread position: | 33-261 |
| Cow position: | chr1:53521137-53520901 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 56 |
| Conread position: | 39-257 |
| Cow position: | chr1:64572743-64572509 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 40-260 |
| Cow position: | chr1:82936379-82936606 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 40-261 |
| Cow position: | chr1:22526101-22525868 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 43-142 |
| Cow position: | chr1:75080319-75080418 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 43-215 |
| Cow position: | chr1:84787485-84787306 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 43-261 |
| Cow position: | chr1:43505746-43505519 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 44-247 |
| Cow position: | chr1:19516181-19516385 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 111, 27 |
| Conread position: | 45-249 |
| Cow position: | chr1:21787544-21787338 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 46-201 |
| Cow position: | chr1:84130-83972 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 46-260 |
| Cow position: | chr1:46143247-46143470 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 17, 174 |
| Conread position: | 46-260 |
| Cow position: | chr1:85772223-85772000 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 46-261 |
| Cow position: | chr1:42873758-42873962 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 188, 41 |
| Conread position: | 46-279 |
| Cow position: | chr1:67919348-67919107 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 22, 218 |
| Conread position: | 47-229 |
| Cow position: | chr1:53651197-53651009 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 41, 144 |
| Conread position: | 47-253 |
| Cow position: | chr1:97755718-97755517 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 47-255 |
| Cow position: | chr1:95156747-95156968 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 47-258 |
| Cow position: | chr1:61391578-61391791 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 47-260 |
| Cow position: | chr1:19481882-19482090 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 47-261 |
| Cow position: | chr1:78857108-78857339 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 48-232 |
| Cow position: | chr1:31256013-31256207 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 48-245 |
| Cow position: | chr1:4329690-4329894 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 168 |
| Conread position: | 48-245 |
| Cow position: | chr1:70483117-70483328 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 48-254 |
| Cow position: | chr1:97611456-97611663 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 48-261 |
| Cow position: | chr1:100552182-100551960 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 48-263 |
| Cow position: | chr1:68688796-68688571 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 48-275 |
| Cow position: | chr1:82880848-82880625 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 97 |
| Conread position: | 49-258 |
| Cow position: | chr1:25281461-25281664 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 86, 40 |
| Conread position: | 49-258 |
| Cow position: | chr1:45555583-45555359 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 49-261 |
| Cow position: | chr1:91065940-91066161 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 157 |
| Conread position: | 49-283 |
| Cow position: | chr1:43286546-43286316 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 50-228 |
| Cow position: | chr1:100800554-100800746 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 50-257 |
| Cow position: | chr1:95177134-95176933 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 51-243 |
| Cow position: | chr1:82336885-82336686 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 51-260 |
| Cow position: | chr1:89388557-89388331 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 51-261 |
| Cow position: | chr1:30983278-30983502 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 174 |
| Conread position: | 51-262 |
| Cow position: | chr1:42397982-42398202 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 51-264 |
| Cow position: | chr1:81481172-81481395 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 51-283 |
| Cow position: | chr1:15206668-15206904 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 45 |
| Conread position: | 51-283 |
| Cow position: | chr1:15334103-15333865 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 178 |
| Conread position: | 51-283 |
| Cow position: | chr1:96304760-96304999 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 88, 219 |
| Conread position: | 52-198 |
| Cow position: | chr1:62181926-62182077 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 113 |
| Conread position: | 52-220 |
| Cow position: | chr1:87934067-87934240 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 52-227 |
| Cow position: | chr1:3679314-3679494 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 160 |
| Conread position: | 52-229 |
| Cow position: | chr1:11708811-11708996 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 52-229 |
| Cow position: | chr1:91796028-91796205 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 119 |
| Conread position: | 52-234 |
| Cow position: | chr1:56913319-56913512 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 52-240 |
| Cow position: | chr1:25021865-25022064 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 118 |
| Conread position: | 52-249 |
| Cow position: | chr1:46006015-46006203 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 52-250 |
| Cow position: | chr1:3942003-3942214 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 52-253 |
| Cow position: | chr1:35671749-35671539 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 165 |
| Conread position: | 52-254 |
| Cow position: | chr1:40212135-40212335 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 149 |
| Conread position: | 52-255 |
| Cow position: | chr1:43499097-43499300 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 34, 93 |
| Conread position: | 52-255 |
| Cow position: | chr1:48618034-48618248 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 52-257 |
| Cow position: | chr1:20667537-20667749 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 52-257 |
| Cow position: | chr1:101507563-101507353 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 52-258 |
| Cow position: | chr1:6854106-6854311 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 52-260 |
| Cow position: | chr1:68817587-68817806 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 16, 167 |
| Conread position: | 52-260 |
| Cow position: | chr1:78839001-78838787 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 79 |
| Conread position: | 52-260 |
| Cow position: | chr1:98912221-98911999 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 34, 166 |
| Conread position: | 52-261 |
| Cow position: | chr1:10778768-10778553 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 52-261 |
| Cow position: | chr1:24132850-24133070 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 37, 168 |
| Conread position: | 52-261 |
| Cow position: | chr1:40600238-40600035 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 42, 88 |
| Conread position: | 52-261 |
| Cow position: | chr1:42541805-42541588 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 52-261 |
| Cow position: | chr1:53623169-53622948 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 18, 180 |
| Conread position: | 52-261 |
| Cow position: | chr1:55230186-55229966 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 52-261 |
| Cow position: | chr1:81228123-81228344 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 34, 118 |
| Conread position: | 52-262 |
| Cow position: | chr1:52429460-52429671 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 52-262 |
| Cow position: | chr1:70538819-70538600 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 52-263 |
| Cow position: | chr1:41137935-41138156 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 52-274 |
| Cow position: | chr1:6759831-6760057 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 112 |
| Conread position: | 52-276 |
| Cow position: | chr1:39426804-39427029 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 89 |
| Conread position: | 52-277 |
| Cow position: | chr1:18936624-18936859 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 179 |
| Conread position: | 52-279 |
| Cow position: | chr1:527870-528100 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 104 |
| Conread position: | 52-282 |
| Cow position: | chr1:1956125-1956361 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 32 |
| Conread position: | 52-283 |
| Cow position: | chr1:5006357-5006131 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 52-283 |
| Cow position: | chr1:70435199-70434971 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 34, 181 |
| Conread position: | 52-283 |
| Cow position: | chr1:80584641-80584396 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 53-242 |
| Cow position: | chr1:29935179-29935378 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 51 |
| Conread position: | 53-247 |
| Cow position: | chr1:79663241-79663435 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 77 |
| Conread position: | 53-248 |
| Cow position: | chr1:43855501-43855304 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 33, 157 |
| Conread position: | 53-250 |
| Cow position: | chr1:100573416-100573626 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 53-253 |
| Cow position: | chr1:36998394-36998183 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 53-258 |
| Cow position: | chr1:73960898-73960695 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 53-258 |
| Cow position: | chr1:89158496-89158705 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 53-260 |
| Cow position: | chr1:10633252-10633037 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 53-260 |
| Cow position: | chr1:56618444-56618659 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 148 |
| Conread position: | 53-260 |
| Cow position: | chr1:97954271-97954477 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 34, 89 |
| Conread position: | 53-261 |
| Cow position: | chr1:22730945-22730724 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 121 |
| Conread position: | 53-261 |
| Cow position: | chr1:65028730-65028524 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 53-261 |
| Cow position: | chr1:67585763-67585550 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 53-261 |
| Cow position: | chr1:95153086-95152861 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 53-267 |
| Cow position: | chr1:19466248-19466038 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 53-273 |
| Cow position: | chr1:78794024-78794250 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 33, 216 |
| Conread position: | 53-274 |
| Cow position: | chr1:72304190-72304411 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 53-278 |
| Cow position: | chr1:7740155-7739922 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 168 |
| Conread position: | 53-278 |
| Cow position: | chr1:59519123-59518896 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 33, 160 |
| Conread position: | 54-178 |
| Cow position: | chr1:8152506-8152381 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 54-194 |
| Cow position: | chr1:39095696-39095545 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 89, 31 |
| Conread position: | 54-210 |
| Cow position: | chr1:40284438-40284598 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 109 |
| Conread position: | 54-222 |
| Cow position: | chr1:30028021-30028200 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 32, 166 |
| Conread position: | 54-229 |
| Cow position: | chr1:11770031-11770214 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 54-236 |
| Cow position: | chr1:102730546-102730747 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 54-237 |
| Cow position: | chr1:85866346-85866173 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 54-240 |
| Cow position: | chr1:63461089-63460889 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 54-250 |
| Cow position: | chr1:33330891-33331090 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 155 |
| Conread position: | 54-253 |
| Cow position: | chr1:7793323-7793523 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 54-258 |
| Cow position: | chr1:16060797-16061011 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 32, 115 |
| Conread position: | 54-260 |
| Cow position: | chr1:24530709-24530493 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 32, 203 |
| Conread position: | 54-260 |
| Cow position: | chr1:41697265-41697049 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 32, 165 |
| Conread position: | 54-260 |
| Cow position: | chr1:42482411-42482193 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 54-260 |
| Cow position: | chr1:54267727-54267946 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 140 |
| Conread position: | 54-261 |
| Cow position: | chr1:10941887-10942104 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 35, 129 |
| Conread position: | 54-261 |
| Cow position: | chr1:10964499-10964282 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 129 |
| Conread position: | 54-261 |
| Cow position: | chr1:61012517-61012303 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 32, 81 |
| Conread position: | 54-261 |
| Cow position: | chr1:74081790-74081991 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 71 |
| Conread position: | 54-261 |
| Cow position: | chr1:79164871-79165092 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 167 |
| Conread position: | 54-272 |
| Cow position: | chr1:14567431-14567657 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 184 |
| Conread position: | 54-274 |
| Cow position: | chr1:3923593-3923823 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 35, 214 |
| Conread position: | 54-276 |
| Cow position: | chr1:50930769-50931000 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 165 |
| Conread position: | 54-277 |
| Cow position: | chr1:66752421-66752652 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 32, 217 |
| Conread position: | 54-278 |
| Cow position: | chr1:71119732-71119493 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 54-279 |
| Cow position: | chr1:64302039-64302269 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 39, 210 |
| Conread position: | 55-151 |
| Cow position: | chr1:52429350-52429450 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 55-209 |
| Cow position: | chr1:53474358-53474198 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 31, 132 |
| Conread position: | 55-215 |
| Cow position: | chr1:41022626-41022455 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 115 |
| Conread position: | 55-236 |
| Cow position: | chr1:69378388-69378584 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 55-250 |
| Cow position: | chr1:78811248-78811039 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 55-259 |
| Cow position: | chr1:78066333-78066545 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 55-259 |
| Cow position: | chr1:92590383-92590189 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 31, 70 |
| Conread position: | 55-260 |
| Cow position: | chr1:41027282-41027066 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 31, 172 |
| Conread position: | 55-260 |
| Cow position: | chr1:54206609-54206823 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 41, 168 |
| Conread position: | 55-260 |
| Cow position: | chr1:70829106-70828894 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 31, 42 |
| Conread position: | 55-260 |
| Cow position: | chr1:78097131-78096918 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 55-261 |
| Cow position: | chr1:37321800-37322008 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 31, 156 |
| Conread position: | 55-261 |
| Cow position: | chr1:91023258-91023475 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 87, 189 |
| Conread position: | 55-261 |
| Cow position: | chr1:97144261-97144474 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 31, 161 |
| Conread position: | 55-278 |
| Cow position: | chr1:45576130-45575907 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 90 |
| Conread position: | 55-278 |
| Cow position: | chr1:99609577-99609344 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 31, 117 |
| Conread position: | 55-278 |
| Cow position: | chr1:100474449-100474207 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 222 |
| Conread position: | 56-229 |
| Cow position: | chr1:28354750-28354579 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 77, 30 |
| Conread position: | 56-245 |
| Cow position: | chr1:71945871-71946078 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 56-248 |
| Cow position: | chr1:90904548-90904753 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 56-250 |
| Cow position: | chr1:32014401-32014199 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 189 |
| Conread position: | 56-254 |
| Cow position: | chr1:90621297-90621509 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 56-258 |
| Cow position: | chr1:93499828-93499612 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 30, 189 |
| Conread position: | 56-260 |
| Cow position: | chr1:5597003-5597217 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 179 |
| Conread position: | 56-260 |
| Cow position: | chr1:61885121-61884904 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 56-260 |
| Cow position: | chr1:81568820-81569037 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 56-260 |
| Cow position: | chr1:86682359-86682569 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 56-261 |
| Cow position: | chr1:49980917-49980700 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 155 |
| Conread position: | 56-261 |
| Cow position: | chr1:53452730-53452527 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 59 |
| Conread position: | 56-261 |
| Cow position: | chr1:61005348-61005572 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 160 |
| Conread position: | 56-261 |
| Cow position: | chr1:67654116-67654330 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 84, 34 |
| Conread position: | 56-261 |
| Cow position: | chr1:68863228-68863025 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 163 |
| Conread position: | 56-261 |
| Cow position: | chr1:86110536-86110747 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 56-273 |
| Cow position: | chr1:88913529-88913298 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 155 |
| Conread position: | 56-274 |
| Cow position: | chr1:49824856-49825089 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 56-280 |
| Cow position: | chr1:89509722-89509950 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 56-283 |
| Cow position: | chr1:70175332-70175567 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 217 |
| Conread position: | 57-198 |
| Cow position: | chr1:80423524-80423679 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 57-227 |
| Cow position: | chr1:70044552-70044379 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 154 |
| Conread position: | 57-232 |
| Cow position: | chr1:62469266-62469080 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 161 |
| Conread position: | 57-233 |
| Cow position: | chr1:32035506-32035692 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 85, 28 |
| Conread position: | 57-248 |
| Cow position: | chr1:55685770-55685975 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 57-258 |
| Cow position: | chr1:71295096-71295303 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 57-260 |
| Cow position: | chr1:4414021-4414214 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 32, 36 |
| Conread position: | 57-261 |
| Cow position: | chr1:45315423-45315646 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 57-261 |
| Cow position: | chr1:52467493-52467294 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 134, 33 |
| Conread position: | 57-261 |
| Cow position: | chr1:54478524-54478319 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 32, 86 |
| Conread position: | 57-261 |
| Cow position: | chr1:55753011-55753225 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 189 |
| Conread position: | 57-261 |
| Cow position: | chr1:74955824-74956027 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 29, 163 |
| Conread position: | 57-275 |
| Cow position: | chr1:100449984-100450197 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 57-281 |
| Cow position: | chr1:84811733-84811969 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 216 |
| Conread position: | 57-283 |
| Cow position: | chr1:8128770-8128998 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 58-238 |
| Cow position: | chr1:42775113-42774924 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 185 |
| Conread position: | 58-253 |
| Cow position: | chr1:42175935-42175719 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 58-254 |
| Cow position: | chr1:100852909-100852706 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 92, 31 |
| Conread position: | 58-254 |
| Cow position: | chr1:102768382-102768178 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 58-257 |
| Cow position: | chr1:95516230-95516033 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 58-258 |
| Cow position: | chr1:69539892-69539684 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 109 |
| Conread position: | 58-260 |
| Cow position: | chr1:22729261-22729047 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 58-260 |
| Cow position: | chr1:25383876-25383660 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 28, 201 |
| Conread position: | 58-260 |
| Cow position: | chr1:83024963-83025173 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 58-261 |
| Cow position: | chr1:196799-197015 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 58-261 |
| Cow position: | chr1:8287423-8287640 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 28, 112 |
| Conread position: | 58-261 |
| Cow position: | chr1:44507175-44506963 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 58-267 |
| Cow position: | chr1:34160035-34159820 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 205 |
| Conread position: | 58-272 |
| Cow position: | chr1:242759-242537 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 28, 209 |
| Conread position: | 58-275 |
| Cow position: | chr1:56477792-56477568 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 110 |
| Conread position: | 58-281 |
| Cow position: | chr1:43352446-43352683 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 177 |
| Conread position: | 58-282 |
| Cow position: | chr1:33998957-33998731 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 10, 155 |
| Conread position: | 58-283 |
| Cow position: | chr1:83072648-83072412 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 59-182 |
| Cow position: | chr1:45233189-45233060 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 59-229 |
| Cow position: | chr1:42353350-42353183 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 59-234 |
| Cow position: | chr1:81638745-81638565 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 59-236 |
| Cow position: | chr1:89835916-89835732 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 27, 180 |
| Conread position: | 59-242 |
| Cow position: | chr1:525012-524817 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 59-243 |
| Cow position: | chr1:97536484-97536296 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 102 |
| Conread position: | 59-253 |
| Cow position: | chr1:93590384-93590588 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 84, 30 |
| Conread position: | 59-257 |
| Cow position: | chr1:42545594-42545785 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 59-257 |
| Cow position: | chr1:45019600-45019808 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 59-257 |
| Cow position: | chr1:88338856-88338661 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 59-259 |
| Cow position: | chr1:81290710-81290499 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 27, 156 |
| Conread position: | 59-260 |
| Cow position: | chr1:41056886-41056669 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 59-260 |
| Cow position: | chr1:55705041-55705255 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 46 |
| Conread position: | 59-261 |
| Cow position: | chr1:51446088-51445878 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 35, 190 |
| Conread position: | 59-261 |
| Cow position: | chr1:72011616-72011823 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 59-277 |
| Cow position: | chr1:3966035-3965811 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 59-277 |
| Cow position: | chr1:52912686-52912923 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 59-277 |
| Cow position: | chr1:53374633-53374408 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 59-277 |
| Cow position: | chr1:81582301-81582088 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 59-278 |
| Cow position: | chr1:42887074-42887301 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 27, 215 |
| Conread position: | 59-279 |
| Cow position: | chr1:51394624-51394392 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 216 |
| Conread position: | 59-279 |
| Cow position: | chr1:102266064-102266296 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 214 |
| Conread position: | 59-283 |
| Cow position: | chr1:88360091-88359848 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 27, 220 |
| Conread position: | 60-202 |
| Cow position: | chr1:3034003-3034150 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 25 |
| Conread position: | 60-213 |
| Cow position: | chr1:10470627-10470464 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 60-234 |
| Cow position: | chr1:76474354-76474540 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 60-236 |
| Cow position: | chr1:77810558-77810743 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 30, 181 |
| Conread position: | 60-248 |
| Cow position: | chr1:30949187-30948995 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 60-250 |
| Cow position: | chr1:101714321-101714121 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 154 |
| Conread position: | 60-252 |
| Cow position: | chr1:7966052-7965851 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 161 |
| Conread position: | 60-252 |
| Cow position: | chr1:98583953-98583751 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 60-253 |
| Cow position: | chr1:99604986-99605189 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 60-253 |
| Cow position: | chr1:101634904-101634710 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 60-258 |
| Cow position: | chr1:52661971-52662179 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 35, 26 |
| Conread position: | 60-258 |
| Cow position: | chr1:61564986-61564791 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 60-258 |
| Cow position: | chr1:85029141-85028946 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 60-260 |
| Cow position: | chr1:41182041-41181836 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 99 |
| Conread position: | 60-260 |
| Cow position: | chr1:56225671-56225460 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 82, 29 |
| Conread position: | 60-260 |
| Cow position: | chr1:82513147-82513362 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 60-260 |
| Cow position: | chr1:97303048-97303258 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 60-262 |
| Cow position: | chr1:64678885-64678684 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 61-214 |
| Cow position: | chr1:19384253-19384419 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 61-238 |
| Cow position: | chr1:85339581-85339400 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 61-241 |
| Cow position: | chr1:71636124-71636315 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 25, 107 |
| Conread position: | 61-242 |
| Cow position: | chr1:12595382-12595567 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 61-248 |
| Cow position: | chr1:42555447-42555269 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 61-256 |
| Cow position: | chr1:79640085-79640294 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 61-258 |
| Cow position: | chr1:51860360-51860568 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 109 |
| Conread position: | 61-259 |
| Cow position: | chr1:61741760-61741975 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 170 |
| Conread position: | 61-261 |
| Cow position: | chr1:8788494-8788281 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 61-261 |
| Cow position: | chr1:48206336-48206541 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 62-242 |
| Cow position: | chr1:100538729-100538549 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 62-256 |
| Cow position: | chr1:12464462-12464670 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 63-261 |
| Cow position: | chr1:97833899-97833702 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 23, 139 |
| Conread position: | 64-259 |
| Cow position: | chr1:24581768-24581572 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 64-283 |
| Cow position: | chr1:93528895-93528668 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 65-228 |
| Cow position: | chr1:96362238-96362404 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 25 |
| Conread position: | 66-212 |
| Cow position: | chr1:51968726-51968576 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 66-215 |
| Cow position: | chr1:92363471-92363627 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 66-222 |
| Cow position: | chr1:73866997-73867152 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 66-245 |
| Cow position: | chr1:92963572-92963401 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 66-260 |
| Cow position: | chr1:89449097-89448891 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 66-261 |
| Cow position: | chr1:759213-759428 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 66-277 |
| Cow position: | chr1:5636873-5637084 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 66-278 |
| Cow position: | chr1:75383162-75382955 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 68-261 |
| Cow position: | chr1:63079198-63079000 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 21, 124 |
| Conread position: | 68-261 |
| Cow position: | chr1:95618838-95618632 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 70-239 |
| Cow position: | chr1:98060254-98060073 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 70-269 |
| Cow position: | chr1:61011370-61011164 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 18, 196 |
| Conread position: | 71-230 |
| Cow position: | chr1:91743269-91743438 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 148 |
| Conread position: | 71-258 |
| Cow position: | chr1:97090511-97090319 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 71-283 |
| Cow position: | chr1:100400010-100400225 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 72-261 |
| Cow position: | chr1:62034642-62034838 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 123 |
| Conread position: | 72-261 |
| Cow position: | chr1:64113607-64113801 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 72-261 |
| Cow position: | chr1:77720067-77720253 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 72-276 |
| Cow position: | chr1:45223769-45223557 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 16, 195 |
| Conread position: | 73-258 |
| Cow position: | chr1:89381466-89381268 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 73-259 |
| Cow position: | chr1:71078770-71078968 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 73-274 |
| Cow position: | chr1:31272261-31272465 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 74-260 |
| Cow position: | chr1:17196434-17196636 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 75-259 |
| Cow position: | chr1:98031105-98030915 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 77-260 |
| Cow position: | chr1:87198006-87197811 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 81-265 |
| Cow position: | chr1:13637483-13637677 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 82-260 |
| Cow position: | chr1:100762255-100762068 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 148 |
| Conread position: | 82-279 |
| Cow position: | chr1:68845325-68845511 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 83-260 |
| Cow position: | chr1:53398153-53397966 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 85-261 |
| Cow position: | chr1:43388876-43389058 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 87-259 |
| Cow position: | chr1:89157954-89158133 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 88-274 |
| Cow position: | chr1:11729346-11729153 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 92-261 |
| Cow position: | chr1:22827317-22827147 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 97-260 |
| Cow position: | chr1:77232422-77232587 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 20 |
| Conread position: | 100-260 |
| Cow position: | chr1:27959401-27959559 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 103-261 |
| Cow position: | chr1:19962209-19962043 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 39, 114 |
| Conread position: | 103-261 |
| Cow position: | chr1:52039793-52039628 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 34, 110 |
| Conread position: | 105-226 |
| Cow position: | chr1:72812007-72811888 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 113-261 |
| Cow position: | chr1:89341839-89341996 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 119-261 |
| Cow position: | chr1:61542788-61542928 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 119-261 |
| Cow position: | chr1:100800484-100800342 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 120-261 |
| Cow position: | chr1:19226925-19227067 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 123-250 |
| Cow position: | chr1:79844592-79844466 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 123-260 |
| Cow position: | chr1:83582804-83582942 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 123-261 |
| Cow position: | chr1:95072461-95072322 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 124-250 |
| Cow position: | chr1:50992058-50991934 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 124-253 |
| Cow position: | chr1:27380586-27380457 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 10, 85 |
| Conread position: | 124-259 |
| Cow position: | chr1:86912568-86912432 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 124-260 |
| Cow position: | chr1:67688455-67688591 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 124-261 |
| Cow position: | chr1:7023251-7023111 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 124-261 |
| Cow position: | chr1:40935640-40935777 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-261 |
| Cow position: | chr1:62036929-62036792 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 124-266 |
| Cow position: | chr1:83783805-83783945 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 124-273 |
| Cow position: | chr1:69481820-69481970 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 124-283 |
| Cow position: | chr1:69264938-69264779 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 10, 110 |
| Conread position: | 126-261 |
| Cow position: | chr1:33775520-33775653 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 128-278 |
| Cow position: | chr1:44125515-44125661 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 146, 78 |
| Conread position: | 129-260 |
| Cow position: | chr1:80900240-80900111 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 130-278 |
| Cow position: | chr1:6752111-6752260 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 113, 25 |
| Conread position: | 134-278 |
| Cow position: | chr1:4581213-4581356 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 137-275 |
| Cow position: | chr1:5135596-5135733 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 140-258 |
| Cow position: | chr1:99793658-99793543 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 140-261 |
| Cow position: | chr1:89350076-89349955 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-278 |
| Cow position: | chr1:81355591-81355731 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 5, 121 |
| Conread position: | 141-258 |
| Cow position: | chr1:97750509-97750626 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-259 |
| Cow position: | chr1:80841756-80841638 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-260 |
| Cow position: | chr1:3882349-3882468 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-260 |
| Cow position: | chr1:84255877-84255758 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-260 |
| Cow position: | chr1:98551829-98551711 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 141-261 |
| Cow position: | chr1:12978792-12978672 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-261 |
| Cow position: | chr1:31855137-31855257 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-261 |
| Cow position: | chr1:39509948-39510068 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-261 |
| Cow position: | chr1:42537212-42537333 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 141-261 |
| Cow position: | chr1:47233368-47233488 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-261 |
| Cow position: | chr1:71253446-71253563 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 141-261 |
| Cow position: | chr1:81580287-81580168 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 141-261 |
| Cow position: | chr1:89230121-89230239 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 141-261 |
| Cow position: | chr1:98512036-98511917 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 141-274 |
| Cow position: | chr1:48214048-48214178 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 141-278 |
| Cow position: | chr1:74822561-74822421 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 40, 124 |
| Conread position: | 141-278 |
| Cow position: | chr1:81613499-81613363 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 141-279 |
| Cow position: | chr1:52995136-52994997 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 23, 119 |
| Conread position: | 141-281 |
| Cow position: | chr1:98576157-98576019 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 141-283 |
| Cow position: | chr1:83618494-83618639 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 135 |
| Conread position: | 144-260 |
| Cow position: | chr1:80442849-80442734 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 172-260 |
| Cow position: | chr1:61560644-61560732 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 76 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 172-276 |
| Cow position: | chr1:6788204-6788305 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
Show alignments to all cow chromosomes.