Cow genome map
| Conread name: | rcbl0_005862.y1 |
| Conread position: | 38-260 |
| Cow position: | chr21:40059312-40059077 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 41-261 |
| Cow position: | chr21:38901049-38900822 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 19, 146 |
| Conread position: | 46-257 |
| Cow position: | chr21:44214388-44214179 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 47-247 |
| Cow position: | chr21:30658137-30657932 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 47-249 |
| Cow position: | chr21:20262069-20262275 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 47-283 |
| Cow position: | chr21:36682602-36682353 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 231 |
| Conread position: | 48-194 |
| Cow position: | chr21:12074903-12075043 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 48-213 |
| Cow position: | chr21:7208500-7208674 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 48-250 |
| Cow position: | chr21:45356090-45355892 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 48-254 |
| Cow position: | chr21:15012706-15012494 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 91, 41 |
| Conread position: | 48-260 |
| Cow position: | chr21:6851441-6851221 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 48-260 |
| Cow position: | chr21:16570164-16569950 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 48-277 |
| Cow position: | chr21:28244742-28244503 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 48-278 |
| Cow position: | chr21:10673385-10673153 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 134 |
| Conread position: | 48-283 |
| Cow position: | chr21:868644-868895 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 38, 232 |
| Conread position: | 49-258 |
| Cow position: | chr21:643594-643375 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 94, 36 |
| Conread position: | 49-278 |
| Cow position: | chr21:36508504-36508273 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 36 |
| Conread position: | 50-215 |
| Cow position: | chr21:29011701-29011876 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 126 |
| Conread position: | 50-274 |
| Cow position: | chr21:46848859-46849091 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 177 |
| Conread position: | 51-258 |
| Cow position: | chr21:22851187-22850972 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 35, 181 |
| Conread position: | 51-261 |
| Cow position: | chr21:32339473-32339692 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 51-278 |
| Cow position: | chr21:6051777-6051537 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 35, 221 |
| Conread position: | 52-151 |
| Cow position: | chr21:20260026-20260128 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 52-223 |
| Cow position: | chr21:11678051-11678226 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 52-258 |
| Cow position: | chr21:48233905-48234115 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 155 |
| Conread position: | 52-267 |
| Cow position: | chr21:957940-957716 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 176 |
| Conread position: | 52-269 |
| Cow position: | chr21:8506276-8506504 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 207 |
| Conread position: | 52-269 |
| Cow position: | chr21:8509164-8509392 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 207 |
| Conread position: | 52-274 |
| Cow position: | chr21:45970908-45971137 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 116 |
| Conread position: | 52-275 |
| Cow position: | chr21:28919260-28919489 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 118 |
| Conread position: | 52-278 |
| Cow position: | chr21:12461698-12461935 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 34, 218 |
| Conread position: | 52-278 |
| Cow position: | chr21:44565458-44565685 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 159 |
| Conread position: | 53-209 |
| Cow position: | chr21:18495485-18495321 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 119 |
| Conread position: | 53-240 |
| Cow position: | chr21:13883747-13883550 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 53-254 |
| Cow position: | chr21:25012348-25012137 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 34, 122 |
| Conread position: | 53-260 |
| Cow position: | chr21:641854-641636 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 53-260 |
| Cow position: | chr21:33982544-33982758 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 33, 163 |
| Conread position: | 53-275 |
| Cow position: | chr21:7673383-7673156 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 159 |
| Conread position: | 54-253 |
| Cow position: | chr21:11182818-11182608 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 54-259 |
| Cow position: | chr21:39394018-39393798 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 54-278 |
| Cow position: | chr21:5898140-5898370 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 54-281 |
| Cow position: | chr21:6713255-6713495 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 164 |
| Conread position: | 55-249 |
| Cow position: | chr21:16498783-16498579 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 31, 164 |
| Conread position: | 55-258 |
| Cow position: | chr21:32559103-32559314 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 55-261 |
| Cow position: | chr21:802055-802269 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 55-261 |
| Cow position: | chr21:25014772-25014978 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 55-261 |
| Cow position: | chr21:28211445-28211243 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 55-261 |
| Cow position: | chr21:31279521-31279304 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 55-261 |
| Cow position: | chr21:37014157-37014358 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 55-267 |
| Cow position: | chr21:5427195-5426983 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 116 |
| Conread position: | 55-274 |
| Cow position: | chr21:8207025-8206807 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 55-278 |
| Cow position: | chr21:15911646-15911435 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 56-227 |
| Cow position: | chr21:45376214-45376033 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 163 |
| Conread position: | 56-253 |
| Cow position: | chr21:37299727-37299517 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 56-258 |
| Cow position: | chr21:23587139-23586933 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 56-259 |
| Cow position: | chr21:34654337-34654124 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 190 |
| Conread position: | 56-260 |
| Cow position: | chr21:742541-742336 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 161 |
| Conread position: | 56-260 |
| Cow position: | chr21:41590299-41590516 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 56-260 |
| Cow position: | chr21:46451705-46451903 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 27, 57 |
| Conread position: | 56-261 |
| Cow position: | chr21:12104620-12104413 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 30, 104 |
| Conread position: | 56-261 |
| Cow position: | chr21:12339884-12339689 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 56-281 |
| Cow position: | chr21:12301263-12301480 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 82 |
| Conread position: | 56-283 |
| Cow position: | chr21:11739854-11740090 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 56-283 |
| Cow position: | chr21:25764883-25764663 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 57-202 |
| Cow position: | chr21:44861255-44861396 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 23 |
| Conread position: | 57-216 |
| Cow position: | chr21:438822-438655 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 57-249 |
| Cow position: | chr21:20174578-20174378 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 57-260 |
| Cow position: | chr21:297995-297803 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 57-260 |
| Cow position: | chr21:21616042-21615831 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 90, 32 |
| Conread position: | 57-261 |
| Cow position: | chr21:71852-71635 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 29, 126 |
| Conread position: | 58-253 |
| Cow position: | chr21:4400058-4399859 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 58-257 |
| Cow position: | chr21:40820586-40820801 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 58-258 |
| Cow position: | chr21:44724111-44724318 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 58-261 |
| Cow position: | chr21:42209380-42209581 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 58-267 |
| Cow position: | chr21:7768691-7768481 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 58-268 |
| Cow position: | chr21:26735662-26735449 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 28, 129 |
| Conread position: | 58-283 |
| Cow position: | chr21:17252712-17252951 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 175 |
| Conread position: | 59-237 |
| Cow position: | chr21:745434-745247 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 123 |
| Conread position: | 59-258 |
| Cow position: | chr21:40134410-40134208 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 103 |
| Conread position: | 59-260 |
| Cow position: | chr21:30222606-30222394 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 59-274 |
| Cow position: | chr21:37837814-37838031 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 59-278 |
| Cow position: | chr21:18064662-18064881 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 115 |
| Conread position: | 60-226 |
| Cow position: | chr21:9710489-9710645 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 60-237 |
| Cow position: | chr21:46972902-46973078 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 60-258 |
| Cow position: | chr21:82322-82118 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 60-258 |
| Cow position: | chr21:19868699-19868904 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 60-260 |
| Cow position: | chr21:20163971-20163757 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 60-260 |
| Cow position: | chr21:22014454-22014239 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 60-260 |
| Cow position: | chr21:27229540-27229742 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 104 |
| Conread position: | 60-261 |
| Cow position: | chr21:674931-674733 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 27, 80 |
| Conread position: | 60-261 |
| Cow position: | chr21:30592051-30592256 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 26, 176 |
| Conread position: | 60-261 |
| Cow position: | chr21:38121342-38121149 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 26, 67 |
| Conread position: | 60-261 |
| Cow position: | chr21:47719042-47719251 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 60-283 |
| Cow position: | chr21:8426706-8426471 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 61-198 |
| Cow position: | chr21:11298813-11298678 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 61-238 |
| Cow position: | chr21:236151-235976 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 61-253 |
| Cow position: | chr21:14126534-14126337 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 171 |
| Conread position: | 61-260 |
| Cow position: | chr21:29069061-29069278 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 61-261 |
| Cow position: | chr21:28030541-28030337 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 62-260 |
| Cow position: | chr21:8349583-8349380 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 78, 23 |
| Conread position: | 63-213 |
| Cow position: | chr21:31462817-31462658 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 63-260 |
| Cow position: | chr21:24875612-24875401 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 63-274 |
| Cow position: | chr21:28907289-28907508 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 154 |
| Conread position: | 66-247 |
| Cow position: | chr21:30848691-30848879 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 66-259 |
| Cow position: | chr21:23822409-23822204 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 66-260 |
| Cow position: | chr21:46599615-46599410 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 66-275 |
| Cow position: | chr21:1511543-1511327 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 162 |
| Conread position: | 66-283 |
| Cow position: | chr21:42135362-42135589 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 212 |
| Conread position: | 67-258 |
| Cow position: | chr21:11644710-11644915 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 68-250 |
| Cow position: | chr21:24598898-24598717 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 147 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 161, 21 |
| Conread position: | 69-261 |
| Cow position: | chr21:19240624-19240825 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 70-265 |
| Cow position: | chr21:17193495-17193707 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 72-246 |
| Cow position: | chr21:8351043-8351234 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 72-250 |
| Cow position: | chr21:41287545-41287734 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 72-260 |
| Cow position: | chr21:31691723-31691534 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 132 |
| Conread position: | 82-260 |
| Cow position: | chr21:22861231-22861051 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 54 |
| Conread position: | 87-257 |
| Cow position: | chr21:7221114-7221288 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 87-260 |
| Cow position: | chr21:828976-829159 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 96-260 |
| Cow position: | chr21:30243460-30243632 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 96-261 |
| Cow position: | chr21:724668-724836 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 29 |
| Conread position: | 105-258 |
| Cow position: | chr21:9990727-9990561 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 108-261 |
| Cow position: | chr21:42348492-42348643 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 12, 90 |
| Conread position: | 117-261 |
| Cow position: | chr21:29485171-29485030 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 117-278 |
| Cow position: | chr21:19359981-19360144 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 147 |
| Conread position: | 124-252 |
| Cow position: | chr21:31147750-31147878 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 124-259 |
| Cow position: | chr21:36297680-36297543 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 124-260 |
| Cow position: | chr21:41046990-41046856 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 124-262 |
| Cow position: | chr21:27624884-27624745 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 134-261 |
| Cow position: | chr21:18828127-18828254 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 136-261 |
| Cow position: | chr21:5341922-5342046 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 137-261 |
| Cow position: | chr21:22465361-22465240 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 137-261 |
| Cow position: | chr21:33264016-33263892 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-261 |
| Cow position: | chr21:11057712-11057830 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 140-261 |
| Cow position: | chr21:28442901-28442780 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 14 |
| Conread position: | 140-261 |
| Cow position: | chr21:28626406-28626290 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 140-283 |
| Cow position: | chr21:12801578-12801720 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 125 |
| Conread position: | 141-250 |
| Cow position: | chr21:29014391-29014500 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-255 |
| Cow position: | chr21:41450549-41450436 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 141-256 |
| Cow position: | chr21:27569005-27569117 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 65 |
| Conread position: | 141-258 |
| Cow position: | chr21:33350909-33350792 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-260 |
| Cow position: | chr21:28191200-28191083 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 141-261 |
| Cow position: | chr21:30980410-30980529 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 141-261 |
| Cow position: | chr21:45262642-45262762 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-261 |
| Cow position: | chr21:5392368-5392488 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 142-261 |
| Cow position: | chr21:33210355-33210236 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-261 |
| Cow position: | chr21:7088764-7088648 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-261 |
| Cow position: | chr21:20183233-20183119 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 152-261 |
| Cow position: | chr21:19363303-19363411 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 158-260 |
| Cow position: | chr21:42540071-42540173 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.