Cow genome map
| Conread name: | rcbl0_005862.y1 |
| Conread position: | 18-261 |
| Cow position: | chr25:35338951-35339208 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 42-248 |
| Cow position: | chr25:11760245-11760455 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 44, 171 |
| Conread position: | 45-235 |
| Cow position: | chr25:15349697-15349897 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 41, 158 |
| Conread position: | 45-261 |
| Cow position: | chr25:14720944-14720726 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 46-230 |
| Cow position: | chr25:12223776-12223583 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 47-243 |
| Cow position: | chr25:36340831-36341019 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 47-267 |
| Cow position: | chr25:3744524-3744769 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 48-219 |
| Cow position: | chr25:4157035-4157222 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 48-250 |
| Cow position: | chr25:24863077-24862868 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 48-254 |
| Cow position: | chr25:36872846-36873067 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 48-261 |
| Cow position: | chr25:10156762-10156554 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 48-276 |
| Cow position: | chr25:26224827-26225059 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 40, 214 |
| Conread position: | 49-283 |
| Cow position: | chr25:36840590-36840359 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 46 |
| Conread position: | 51-140 |
| Cow position: | chr25:26643018-26642926 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 51-261 |
| Cow position: | chr25:21893540-21893320 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 51-262 |
| Cow position: | chr25:33663703-33663924 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 51-267 |
| Cow position: | chr25:17704946-17704721 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 215 |
| Conread position: | 51-272 |
| Cow position: | chr25:13325770-13325550 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 52-238 |
| Cow position: | chr25:24669247-24669439 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 34, 134 |
| Conread position: | 52-250 |
| Cow position: | chr25:22315409-22315198 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 52-254 |
| Cow position: | chr25:9573930-9574141 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 153 |
| Conread position: | 52-259 |
| Cow position: | chr25:2111241-2111033 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 52-260 |
| Cow position: | chr25:28597399-28597629 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 52-260 |
| Cow position: | chr25:38958150-38957945 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 52-261 |
| Cow position: | chr25:9056360-9056161 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 52-261 |
| Cow position: | chr25:35109073-35109287 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 52-261 |
| Cow position: | chr25:40682942-40682720 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 52-273 |
| Cow position: | chr25:30852970-30852736 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 52-274 |
| Cow position: | chr25:12755286-12755518 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 216 |
| Conread position: | 52-276 |
| Cow position: | chr25:26701225-26701000 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 161 |
| Conread position: | 52-278 |
| Cow position: | chr25:24573263-24573033 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 52-280 |
| Cow position: | chr25:10364149-10364368 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 53-200 |
| Cow position: | chr25:13565130-13565280 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 139 |
| Conread position: | 53-228 |
| Cow position: | chr25:11957008-11956819 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 53-253 |
| Cow position: | chr25:26089623-26089823 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 91 |
| Conread position: | 53-254 |
| Cow position: | chr25:20203112-20202902 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 53-260 |
| Cow position: | chr25:1840525-1840307 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 53-260 |
| Cow position: | chr25:5637185-5637402 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 53-260 |
| Cow position: | chr25:18810535-18810326 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 53-261 |
| Cow position: | chr25:20008339-20008114 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 53-276 |
| Cow position: | chr25:14513310-14513082 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 205 |
| Conread position: | 53-278 |
| Cow position: | chr25:26087724-26087484 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 165 |
| Conread position: | 54-226 |
| Cow position: | chr25:31926181-31926360 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 54-237 |
| Cow position: | chr25:18491240-18491044 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 54-242 |
| Cow position: | chr25:27916204-27916016 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 152 |
| Conread position: | 54-246 |
| Cow position: | chr25:18720924-18721123 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 160 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 54-260 |
| Cow position: | chr25:11432747-11432962 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 54-261 |
| Cow position: | chr25:22298835-22298619 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 91 |
| Conread position: | 55-203 |
| Cow position: | chr25:17708007-17707864 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 55-218 |
| Cow position: | chr25:20063462-20063299 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 55-254 |
| Cow position: | chr25:2362027-2361826 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 31, 156 |
| Conread position: | 55-258 |
| Cow position: | chr25:21191679-21191474 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 58 |
| Conread position: | 55-258 |
| Cow position: | chr25:33557468-33557260 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 55-259 |
| Cow position: | chr25:7551167-7551375 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 55-260 |
| Cow position: | chr25:20523036-20523251 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 55-260 |
| Cow position: | chr25:33550714-33550492 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 55-261 |
| Cow position: | chr25:14833466-14833682 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 55-261 |
| Cow position: | chr25:18288568-18288786 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 31, 182 |
| Conread position: | 55-282 |
| Cow position: | chr25:7441211-7440994 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 56-139 |
| Cow position: | chr25:14212066-14211981 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 56-148 |
| Cow position: | chr25:6940289-6940382 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 30, 85 |
| Conread position: | 56-189 |
| Cow position: | chr25:7450260-7450129 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 56-216 |
| Cow position: | chr25:15553100-15552937 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 56-237 |
| Cow position: | chr25:7217018-7216832 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 30, 157 |
| Conread position: | 56-239 |
| Cow position: | chr25:24115114-24115312 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 56-250 |
| Cow position: | chr25:8347859-8347645 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 56-250 |
| Cow position: | chr25:21668449-21668242 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 56-251 |
| Cow position: | chr25:9025324-9025115 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 30, 149 |
| Conread position: | 56-260 |
| Cow position: | chr25:3345999-3346211 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 30, 161 |
| Conread position: | 56-260 |
| Cow position: | chr25:4245866-4245660 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 132 |
| Conread position: | 56-260 |
| Cow position: | chr25:13621161-13621373 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 56-261 |
| Cow position: | chr25:4681406-4681214 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 56-261 |
| Cow position: | chr25:7750648-7750434 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 56-261 |
| Cow position: | chr25:9843382-9843158 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 56-261 |
| Cow position: | chr25:13768159-13767953 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 71, 33 |
| Conread position: | 56-261 |
| Cow position: | chr25:18929005-18929210 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 56-261 |
| Cow position: | chr25:26679428-26679208 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 56-261 |
| Cow position: | chr25:33457926-33457714 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 56-261 |
| Cow position: | chr25:36082069-36081859 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 186 |
| Conread position: | 56-275 |
| Cow position: | chr25:13272770-13272538 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 30, 216 |
| Conread position: | 56-282 |
| Cow position: | chr25:22348257-22348501 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 230 |
| Conread position: | 56-283 |
| Cow position: | chr25:12778360-12778578 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 215, 33 |
| Conread position: | 57-227 |
| Cow position: | chr25:22565766-22565942 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 28 |
| Conread position: | 57-233 |
| Cow position: | chr25:22734206-22734018 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 57-258 |
| Cow position: | chr25:10643116-10643324 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 57-260 |
| Cow position: | chr25:12509821-12510028 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 57-260 |
| Cow position: | chr25:13826631-13826418 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 58-241 |
| Cow position: | chr25:32453231-32453414 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 111 |
| Conread position: | 58-250 |
| Cow position: | chr25:14419893-14419694 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 58-260 |
| Cow position: | chr25:37331846-37332053 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 82, 157 |
| Conread position: | 59-248 |
| Cow position: | chr25:7306488-7306286 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 59-253 |
| Cow position: | chr25:37255057-37254875 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 59-258 |
| Cow position: | chr25:33101415-33101620 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 59-261 |
| Cow position: | chr25:18760513-18760726 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 60-140 |
| Cow position: | chr25:7012924-7012842 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 74 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 60-224 |
| Cow position: | chr25:24147759-24147927 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 105 |
| Conread position: | 60-255 |
| Cow position: | chr25:19130051-19129842 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 60-260 |
| Cow position: | chr25:4521644-4521854 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 159 |
| Conread position: | 60-260 |
| Cow position: | chr25:8120978-8120766 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 154 |
| Conread position: | 60-260 |
| Cow position: | chr25:20785390-20785603 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 135 |
| Conread position: | 60-260 |
| Cow position: | chr25:22179107-22178900 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 26, 151 |
| Conread position: | 60-261 |
| Cow position: | chr25:11436627-11436825 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 60-261 |
| Cow position: | chr25:11780461-11780260 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 103 |
| Conread position: | 60-261 |
| Cow position: | chr25:19679549-19679337 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 60-278 |
| Cow position: | chr25:17975202-17975413 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 61-248 |
| Cow position: | chr25:31657084-31657282 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 61-250 |
| Cow position: | chr25:23998743-23998931 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 61-261 |
| Cow position: | chr25:7641259-7641468 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 128 |
| Conread position: | 61-278 |
| Cow position: | chr25:30462125-30462338 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 62-213 |
| Cow position: | chr25:14210171-14210013 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 62-260 |
| Cow position: | chr25:16318955-16319157 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 62-261 |
| Cow position: | chr25:15273859-15273655 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 63-261 |
| Cow position: | chr25:11823250-11823448 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 23, 81 |
| Conread position: | 64-261 |
| Cow position: | chr25:26306010-26306222 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 64-274 |
| Cow position: | chr25:26072370-26072587 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 165 |
| Conread position: | 65-260 |
| Cow position: | chr25:19363868-19364076 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 66-228 |
| Cow position: | chr25:36156002-36155833 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 20, 119 |
| Conread position: | 66-260 |
| Cow position: | chr25:11051713-11051514 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 66-260 |
| Cow position: | chr25:13223088-13222883 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 66-261 |
| Cow position: | chr25:9269531-9269330 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 156 |
| Conread position: | 68-252 |
| Cow position: | chr25:23828941-23829138 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 70-261 |
| Cow position: | chr25:7673494-7673277 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 72-261 |
| Cow position: | chr25:36873152-36873351 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 72-274 |
| Cow position: | chr25:20023209-20023417 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 75-253 |
| Cow position: | chr25:11661648-11661828 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 80-261 |
| Cow position: | chr25:16065057-16064874 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 85-259 |
| Cow position: | chr25:2624964-2624780 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 58, 132 |
| Conread position: | 85-260 |
| Cow position: | chr25:23244834-23245019 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 85-278 |
| Cow position: | chr25:17190584-17190777 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 126 |
| Conread position: | 87-259 |
| Cow position: | chr25:36872531-36872342 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 88-259 |
| Cow position: | chr25:15715039-15714857 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 88-261 |
| Cow position: | chr25:9107363-9107542 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 93-232 |
| Cow position: | chr25:32277451-32277597 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 95-256 |
| Cow position: | chr25:12840570-12840731 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 103-258 |
| Cow position: | chr25:34978716-34978877 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 103-261 |
| Cow position: | chr25:18988532-18988372 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 113-256 |
| Cow position: | chr25:36021452-36021310 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 137, 40 |
| Conread position: | 115-249 |
| Cow position: | chr25:34967382-34967515 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 117-277 |
| Cow position: | chr25:23505179-23505019 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 118-260 |
| Cow position: | chr25:21208847-21208985 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 123-261 |
| Cow position: | chr25:23817720-23817858 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 123-276 |
| Cow position: | chr25:14157746-14157592 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 124-252 |
| Cow position: | chr25:4547600-4547728 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 125, 19 |
| Conread position: | 124-260 |
| Cow position: | chr25:15254228-15254366 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 124-261 |
| Cow position: | chr25:6682945-6683080 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 124-267 |
| Cow position: | chr25:5920201-5920058 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 133 |
| Conread position: | 124-281 |
| Cow position: | chr25:19478795-19478637 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 125-248 |
| Cow position: | chr25:13567086-13566963 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 126-260 |
| Cow position: | chr25:12609457-12609326 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 130-275 |
| Cow position: | chr25:447153-447294 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 136-260 |
| Cow position: | chr25:7012532-7012408 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 137-261 |
| Cow position: | chr25:23745365-23745241 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 75, 13 |
| Conread position: | 137-282 |
| Cow position: | chr25:15463692-15463548 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 140-261 |
| Cow position: | chr25:18541843-18541964 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-261 |
| Cow position: | chr25:36036676-36036797 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-262 |
| Cow position: | chr25:26238965-26238839 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 141-253 |
| Cow position: | chr25:30064811-30064923 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-260 |
| Cow position: | chr25:6227137-6227018 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-260 |
| Cow position: | chr25:40931375-40931260 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 141-261 |
| Cow position: | chr25:7379045-7379165 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-261 |
| Cow position: | chr25:9990008-9990128 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-261 |
| Cow position: | chr25:22531383-22531265 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 141-261 |
| Cow position: | chr25:30624981-30625101 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-267 |
| Cow position: | chr25:36762207-36762081 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-276 |
| Cow position: | chr25:14809375-14809240 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-281 |
| Cow position: | chr25:6961051-6961192 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 155-260 |
| Cow position: | chr25:14211717-14211612 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.