Cow genome map

Conread name: rcbl0_005862.y1

Conread position: 16-260
Cow position: chr6:60850983-60850725 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 22, 193

Conread position: 31-279
Cow position: chr6:12338256-12337999 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 12

Conread position: 35-260
Cow position: chr6:63720457-63720225 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 0

Conread position: 36-258
Cow position: chr6:53546295-53546062 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 39-216
Cow position: chr6:5600606-5600792 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 13

Conread position: 39-229
Cow position: chr6:59297305-59297108 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 127

Conread position: 39-255
Cow position: chr6:7189865-7190089 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 42-250
Cow position: chr6:30825519-30825731 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 171

Conread position: 46-219
Cow position: chr6:50577768-50577586 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 43

Conread position: 46-278
Cow position: chr6:7119374-7119610 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 28, 218

Conread position: 47-257
Cow position: chr6:17090831-17090629 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 17

Conread position: 47-260
Cow position: chr6:13565337-13565113 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 39, 24

Conread position: 47-260
Cow position: chr6:31535321-31535544 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 47-261
Cow position: chr6:53460318-53460543 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 47-276
Cow position: chr6:19293050-19292810 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 39, 0

Conread position: 47-277
Cow position: chr6:3351280-3351035 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 48-144
Cow position: chr6:63233769-63233670 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 49-249
Cow position: chr6:69145593-69145395 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 27, 38

Conread position: 49-275
Cow position: chr6:21535290-21535047 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 126

Conread position: 50-222
Cow position: chr6:58173592-58173412 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 50-229
Cow position: chr6:32006207-32006399 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 50-256
Cow position: chr6:53024562-53024775 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 51-215
Cow position: chr6:10613078-10612911 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 51-261
Cow position: chr6:37149430-37149213 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 88, 30

Conread position: 51-283
Cow position: chr6:37463253-37463025 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 74

Conread position: 52-151
Cow position: chr6:18903790-18903892 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 52-196
Cow position: chr6:67614919-67615064 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 91

Conread position: 52-211
Cow position: chr6:7291558-7291389 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 52-217
Cow position: chr6:43540015-43540182 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 52-219
Cow position: chr6:34463343-34463522 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 140

Conread position: 52-240
Cow position: chr6:53792231-53792424 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 33

Conread position: 52-254
Cow position: chr6:23938298-23938091 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 52-255
Cow position: chr6:22985615-22985825 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 52-256
Cow position: chr6:41657512-41657296 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 52-256
Cow position: chr6:44623835-44623638 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 64

Conread position: 52-260
Cow position: chr6:26155392-26155173 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 24

Conread position: 52-260
Cow position: chr6:32122142-32121932 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 111

Conread position: 52-261
Cow position: chr6:2078569-2078791 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 52-261
Cow position: chr6:13653593-13653377 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 99

Conread position: 52-261
Cow position: chr6:23401748-23401968 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 163

Conread position: 52-261
Cow position: chr6:27888590-27888375 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 36

Conread position: 52-261
Cow position: chr6:55282045-55282270 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 178
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 72, 0

Conread position: 52-261
Cow position: chr6:60273764-60273987 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 52-261
Cow position: chr6:67187925-67187707 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 88, 28

Conread position: 52-267
Cow position: chr6:56716056-56715836 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 82

Conread position: 52-276
Cow position: chr6:54127574-54127804 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 124

Conread position: 52-276
Cow position: chr6:55417286-55417521 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 116

Conread position: 52-277
Cow position: chr6:5330661-5330420 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 52-277
Cow position: chr6:35726337-35726103 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 117

Conread position: 52-278
Cow position: chr6:899074-899285 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 73

Conread position: 52-278
Cow position: chr6:4469013-4468776 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 212

Conread position: 52-283
Cow position: chr6:58725614-58725375 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 161

Conread position: 53-246
Cow position: chr6:36196448-36196249 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 43

Conread position: 53-258
Cow position: chr6:38640477-38640260 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 36

Conread position: 53-258
Cow position: chr6:44636268-44636473 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 123, 32

Conread position: 53-260
Cow position: chr6:69334070-69334285 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 160

Conread position: 53-261
Cow position: chr6:15305817-15305595 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 170

Conread position: 53-261
Cow position: chr6:16091143-16090927 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 0

Conread position: 53-261
Cow position: chr6:32287877-32287662 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 53-273
Cow position: chr6:143132-143362 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 188

Conread position: 53-274
Cow position: chr6:1475583-1475356 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 71

Conread position: 53-276
Cow position: chr6:15300594-15300819 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 150

Conread position: 53-283
Cow position: chr6:52478165-52478410 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 53-283
Cow position: chr6:58370993-58370763 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 153

Conread position: 54-214
Cow position: chr6:4323567-4323400 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 54-249
Cow position: chr6:21183978-21184187 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 115

Conread position: 54-252
Cow position: chr6:54082769-54082957 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 190, 31

Conread position: 54-253
Cow position: chr6:13367527-13367316 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 116

Conread position: 54-258
Cow position: chr6:9008380-9008585 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 19, 77

Conread position: 54-260
Cow position: chr6:12761525-12761304 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 146

Conread position: 54-260
Cow position: chr6:17414205-17414422 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 76, 27

Conread position: 54-260
Cow position: chr6:39358098-39358320 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 54-260
Cow position: chr6:42035015-42034797 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 159

Conread position: 54-261
Cow position: chr6:64432179-64431961 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 54-261
Cow position: chr6:68685785-68685578 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 91

Conread position: 54-276
Cow position: chr6:47884800-47885015 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 32, 77

Conread position: 54-283
Cow position: chr6:58459958-58459723 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 89, 29

Conread position: 55-253
Cow position: chr6:26728300-26728500 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 30

Conread position: 55-258
Cow position: chr6:8966332-8966124 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 31, 0

Conread position: 55-258
Cow position: chr6:46558298-46558084 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 55-260
Cow position: chr6:29485327-29485107 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 55-261
Cow position: chr6:120481-120271 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 86, 30

Conread position: 55-275
Cow position: chr6:54490502-54490724 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 126

Conread position: 55-276
Cow position: chr6:44078759-44078530 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 166

Conread position: 55-278
Cow position: chr6:26450543-26450322 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 158

Conread position: 56-219
Cow position: chr6:37994447-37994274 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 56-224
Cow position: chr6:35341944-35342121 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 33

Conread position: 56-245
Cow position: chr6:29210720-29210534 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 69

Conread position: 56-250
Cow position: chr6:24468156-24468361 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 56-258
Cow position: chr6:8094043-8094262 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 56-259
Cow position: chr6:48097360-48097578 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 68, 33

Conread position: 56-260
Cow position: chr6:5820017-5820222 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 54

Conread position: 56-260
Cow position: chr6:60468474-60468263 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 33

Conread position: 56-261
Cow position: chr6:23696237-23696024 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 84, 33

Conread position: 56-261
Cow position: chr6:37395162-37395377 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 18

Conread position: 56-261
Cow position: chr6:43651967-43651776 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 56-261
Cow position: chr6:59438218-59438425 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 80

Conread position: 56-261
Cow position: chr6:67451129-67451347 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 86, 25

Conread position: 56-274
Cow position: chr6:35989995-35990225 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 214

Conread position: 56-276
Cow position: chr6:38771514-38771292 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 32, 154

Conread position: 56-278
Cow position: chr6:56850260-56850025 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 216

Conread position: 57-257
Cow position: chr6:51933781-51933582 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 29, 59

Conread position: 57-258
Cow position: chr6:21293256-21293469 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 139

Conread position: 57-258
Cow position: chr6:67451422-67451620 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 114

Conread position: 57-260
Cow position: chr6:13687575-13687787 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 17

Conread position: 57-260
Cow position: chr6:65871273-65871062 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 29, 136

Conread position: 57-261
Cow position: chr6:4383716-4383504 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 197

Conread position: 57-261
Cow position: chr6:21470190-21470405 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 0

Conread position: 57-261
Cow position: chr6:30024119-30023909 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 82, 32

Conread position: 58-224
Cow position: chr6:34423219-34423398 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 58-247
Cow position: chr6:41226606-41226792 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 84, 31

Conread position: 58-260
Cow position: chr6:1866972-1866757 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 203

Conread position: 58-260
Cow position: chr6:18117807-18118024 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 10, 177

Conread position: 58-260
Cow position: chr6:19259117-19259317 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 68

Conread position: 58-261
Cow position: chr6:29775859-29775646 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 58-275
Cow position: chr6:15243502-15243265 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 18, 33

Conread position: 58-275
Cow position: chr6:16700495-16700274 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 209

Conread position: 58-283
Cow position: chr6:59602974-59603203 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 28, 210

Conread position: 59-231
Cow position: chr6:28561928-28562115 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 59-243
Cow position: chr6:45920980-45921172 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 59-260
Cow position: chr6:66570665-66570465 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 83, 30

Conread position: 59-261
Cow position: chr6:47575131-47574930 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 66

Conread position: 59-268
Cow position: chr6:47305932-47306125 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 79

Conread position: 60-252
Cow position: chr6:18954853-18955043 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 83, 25

Conread position: 60-257
Cow position: chr6:45690380-45690582 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 14

Conread position: 60-258
Cow position: chr6:1941595-1941806 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 164

Conread position: 60-258
Cow position: chr6:7128165-7128376 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 60-260
Cow position: chr6:693906-694126 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 60-260
Cow position: chr6:32866982-32867193 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 54

Conread position: 60-260
Cow position: chr6:46859932-46860142 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 11

Conread position: 60-261
Cow position: chr6:44194317-44194525 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 80, 29

Conread position: 60-261
Cow position: chr6:50504695-50504480 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 60-262
Cow position: chr6:60143960-60144175 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 0

Conread position: 60-274
Cow position: chr6:17068416-17068636 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 75, 25

Conread position: 60-283
Cow position: chr6:62056850-62056617 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 212

Conread position: 61-213
Cow position: chr6:54406567-54406727 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 10

Conread position: 61-247
Cow position: chr6:36537125-36537323 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 61-260
Cow position: chr6:10105745-10105954 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 66, 28

Conread position: 61-274
Cow position: chr6:5609204-5609435 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 189

Conread position: 62-247
Cow position: chr6:21083304-21083503 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 62-254
Cow position: chr6:9302486-9302686 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 155

Conread position: 62-259
Cow position: chr6:61110019-61109813 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 132

Conread position: 62-275
Cow position: chr6:67069578-67069805 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 88, 23

Conread position: 63-260
Cow position: chr6:49437567-49437358 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 22

Conread position: 66-251
Cow position: chr6:49398396-49398586 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 66-261
Cow position: chr6:2899351-2899545 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 60

Conread position: 66-261
Cow position: chr6:12623742-12623539 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 128

Conread position: 66-278
Cow position: chr6:24031596-24031387 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 77

Conread position: 67-254
Cow position: chr6:42118924-42118733 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 95

Conread position: 67-258
Cow position: chr6:38853424-38853632 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 68-215
Cow position: chr6:63182516-63182358 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 68-261
Cow position: chr6:21231743-21231548 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 68-261
Cow position: chr6:46466049-46465845 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 69-278
Cow position: chr6:39093975-39093759 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 196

Conread position: 71-277
Cow position: chr6:38207258-38207480 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 25

Conread position: 72-258
Cow position: chr6:54133038-54132842 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 43

Conread position: 72-258
Cow position: chr6:63047803-63047619 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 54

Conread position: 74-238
Cow position: chr6:24905847-24905674 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 120

Conread position: 75-260
Cow position: chr6:28999733-28999916 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 65

Conread position: 84-261
Cow position: chr6:31078654-31078852 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 83

Conread position: 85-247
Cow position: chr6:36920763-36920936 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 148

Conread position: 85-260
Cow position: chr6:1870985-1871173 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 85-260
Cow position: chr6:37466289-37466115 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 106, 53

Conread position: 85-261
Cow position: chr6:60740222-60740038 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 85-282
Cow position: chr6:34119151-34119352 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 130

Conread position: 87-260
Cow position: chr6:26915538-26915356 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 131

Conread position: 87-261
Cow position: chr6:21736692-21736861 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 74

Conread position: 88-257
Cow position: chr6:29248667-29248508 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 92-250
Cow position: chr6:60265989-60266148 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 12, 20

Conread position: 92-260
Cow position: chr6:61523999-61524180 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 93-260
Cow position: chr6:61269515-61269337 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 96-261
Cow position: chr6:57571679-57571503 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 97-261
Cow position: chr6:61168943-61168779 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 20

Conread position: 99-260
Cow position: chr6:20929331-20929488 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 117-282
Cow position: chr6:63065995-63065833 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 82, 15

Conread position: 123-235
Cow position: chr6:60186500-60186613 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 123-254
Cow position: chr6:60516787-60516656 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 84

Conread position: 123-258
Cow position: chr6:58597343-58597479 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 123-261
Cow position: chr6:53090173-53090033 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 124-260
Cow position: chr6:222288-222427 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 118

Conread position: 124-261
Cow position: chr6:1002101-1002239 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 124-261
Cow position: chr6:6401112-6400978 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 8

Conread position: 124-261
Cow position: chr6:47799455-47799317 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 36

Conread position: 124-261
Cow position: chr6:51463473-51463609 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 14

Conread position: 124-261
Cow position: chr6:51969236-51969101 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 125-270
Cow position: chr6:28900487-28900342 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 121

Conread position: 127-260
Cow position: chr6:21869488-21869624 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 130-260
Cow position: chr6:60350138-60350267 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 131-261
Cow position: chr6:47640278-47640408 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 136-260
Cow position: chr6:23465886-23466008 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 140-261
Cow position: chr6:66375188-66375309 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 141-258
Cow position: chr6:46571249-46571132 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 141-261
Cow position: chr6:32853331-32853212 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 141-261
Cow position: chr6:57328250-57328369 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 141-261
Cow position: chr6:60516969-60516850 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 141-262
Cow position: chr6:28976896-28977017 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 141-267
Cow position: chr6:54990857-54990983 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 142-260
Cow position: chr6:20097816-20097934 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.