Cow genome map
Conread name: | rcbl0_006057.y1 |
Conread position: | 54-335 |
Cow position: | chr1:24509726-24509448 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 195 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 145, 91 |
Conread position: | 58-248 |
Cow position: | chr1:40877836-40878023 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 137 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 31, 36 |
Conread position: | 63-387 |
Cow position: | chr1:69703201-69702881 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 235 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 78, 234 |
Conread position: | 65-249 |
Cow position: | chr1:26511286-26511470 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 136 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 77, 159 |
Conread position: | 65-276 |
Cow position: | chr1:80275630-80275840 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 162 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 77, 157 |
Conread position: | 65-335 |
Cow position: | chr1:65187887-65187617 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 158 |
Conread position: | 65-335 |
Cow position: | chr1:85000647-85000916 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 202 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 81, 161 |
Conread position: | 65-337 |
Cow position: | chr1:84760470-84760739 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 23 |
Conread position: | 65-342 |
Cow position: | chr1:57563073-57562798 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 200 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 77, 45 |
Conread position: | 65-352 |
Cow position: | chr1:6968851-6968566 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 18 |
Conread position: | 65-395 |
Cow position: | chr1:23086286-23086610 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 7 |
Conread position: | 65-395 |
Cow position: | chr1:81454659-81454336 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 10 |
Conread position: | 66-342 |
Cow position: | chr1:81491568-81491295 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 157 |
Conread position: | 69-335 |
Cow position: | chr1:83321411-83321682 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 69-348 |
Cow position: | chr1:20806894-20807170 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 156 |
Conread position: | 70-293 |
Cow position: | chr1:57776647-57776418 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 166 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 75, 5 |
Conread position: | 70-335 |
Cow position: | chr1:40378213-40377952 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 194 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 7, 59 |
Conread position: | 70-335 |
Cow position: | chr1:92709243-92708977 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 5 |
Conread position: | 74-364 |
Cow position: | chr1:60860351-60860061 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 213 |
Conread position: | 75-289 |
Cow position: | chr1:28329601-28329814 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 162 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 67, 141 |
Conread position: | 75-324 |
Cow position: | chr1:31978852-31979100 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 45 |
Conread position: | 75-342 |
Cow position: | chr1:57357497-57357224 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 195 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 77, 216 |
Conread position: | 75-342 |
Cow position: | chr1:57893554-57893271 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 207 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 75-344 |
Cow position: | chr1:89915971-89915702 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 113 |
Conread position: | 75-353 |
Cow position: | chr1:13314169-13313894 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 208 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 117, 42 |
Conread position: | 75-386 |
Cow position: | chr1:61553978-61554291 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 150 |
Conread position: | 75-396 |
Cow position: | chr1:88972996-88973315 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 224 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 66, 116 |
Conread position: | 76-321 |
Cow position: | chr1:6309216-6309454 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 179 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 64, 74 |
Conread position: | 76-323 |
Cow position: | chr1:46389403-46389163 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 175 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 65, 75 |
Conread position: | 76-323 |
Cow position: | chr1:61606708-61606469 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 171 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 66, 75 |
Conread position: | 76-323 |
Cow position: | chr1:67902056-67902296 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 181 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 65, 75 |
Conread position: | 76-324 |
Cow position: | chr1:100046175-100045938 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 178 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 65, 75 |
Conread position: | 76-332 |
Cow position: | chr1:24763760-24764008 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 178 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 65, 46 |
Conread position: | 76-334 |
Cow position: | chr1:71087122-71086869 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 195 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 76-334 |
Cow position: | chr1:89407230-89407477 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 175 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 66, 92 |
Conread position: | 76-334 |
Cow position: | chr1:94744960-94744707 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 186 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 184, 68 |
Conread position: | 76-334 |
Cow position: | chr1:94761262-94761507 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 184 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 44, 22 |
Conread position: | 76-339 |
Cow position: | chr1:4279527-4279788 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 113 |
Conread position: | 77-334 |
Cow position: | chr1:55114781-55114525 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 120 |
Conread position: | 78-323 |
Cow position: | chr1:100397658-100397423 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 172 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 67, 73 |
Conread position: | 78-334 |
Cow position: | chr1:94754222-94753969 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 177 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 67, 72 |
Conread position: | 80-379 |
Cow position: | chr1:31126749-31127049 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 69 |
Conread position: | 80-392 |
Cow position: | chr1:13680891-13681209 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 216 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 72, 37 |
Conread position: | 80-392 |
Cow position: | chr1:57854593-57854279 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 212 |
Conread position: | 80-392 |
Cow position: | chr1:90845314-90845621 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 134 |
Conread position: | 81-310 |
Cow position: | chr1:64753509-64753277 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 33 |
Conread position: | 81-342 |
Cow position: | chr1:43588731-43588479 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 187 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 63, 82 |
Conread position: | 84-385 |
Cow position: | chr1:17092500-17092194 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 212 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 41, 160 |
Conread position: | 85-342 |
Cow position: | chr1:93392077-93391833 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 194 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 114, 45 |
Conread position: | 86-334 |
Cow position: | chr1:15983647-15983887 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 180 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 56, 77 |
Conread position: | 93-339 |
Cow position: | chr1:94408946-94409180 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 182 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 50, 108 |
Conread position: | 94-315 |
Cow position: | chr1:39638669-39638890 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 163 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 31, 44 |
Conread position: | 94-381 |
Cow position: | chr1:20264473-20264763 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 30 |
Conread position: | 101-334 |
Cow position: | chr1:70171420-70171647 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 166 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 41, 50 |
Conread position: | 111-334 |
Cow position: | chr1:35544305-35544525 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 162 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 31, 53 |
Conread position: | 119-323 |
Cow position: | chr1:24684293-24684493 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 146 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 23, 45 |
Conread position: | 122-323 |
Cow position: | chr1:7489131-7489325 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 148 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 18, 29 |
Conread position: | 125-335 |
Cow position: | chr1:13992620-13992411 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 159 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 28, 100 |
Conread position: | 135-285 |
Cow position: | chr1:13737960-13738112 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 168-392 |
Cow position: | chr1:23920788-23921008 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 174 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 88, 54 |
Conread position: | 169-327 |
Cow position: | chr1:8143001-8142839 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 117 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 174-323 |
Cow position: | chr1:97447457-97447307 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 109 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 177-323 |
Cow position: | chr1:41972841-41972987 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 27, 97 |
Conread position: | 177-381 |
Cow position: | chr1:4264623-4264829 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 153 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 7, 175 |
Conread position: | 182-363 |
Cow position: | chr1:70178284-70178102 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 145 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 186-355 |
Cow position: | chr1:33914192-33914362 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 70, 107 |
Conread position: | 188-335 |
Cow position: | chr1:86643055-86643201 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 117 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 13, 67 |
Conread position: | 195-392 |
Cow position: | chr1:41607440-41607244 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 153 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 62, 28 |
Conread position: | 204-341 |
Cow position: | chr1:83390621-83390761 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 257-384 |
Cow position: | chr1:78259321-78259450 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 103, 0 |
Show alignments to all cow chromosomes.