Cow genome map
| Conread name: | rcbl0_006057.y1 |
| Conread position: | 58-304 |
| Cow position: | chr10:10755882-10756134 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 58-392 |
| Cow position: | chr10:17179020-17179371 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 31, 288 |
| Conread position: | 58-395 |
| Cow position: | chr10:26023781-26023444 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 44 |
| Conread position: | 60-329 |
| Cow position: | chr10:16804099-16804369 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 167 |
| Conread position: | 63-245 |
| Cow position: | chr10:14423136-14423317 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 161 |
| Conread position: | 65-292 |
| Cow position: | chr10:52421118-52420894 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 65-296 |
| Cow position: | chr10:5863791-5864025 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 65-325 |
| Cow position: | chr10:29098529-29098800 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 80, 188 |
| Conread position: | 65-330 |
| Cow position: | chr10:19651333-19651596 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 65-335 |
| Cow position: | chr10:8095327-8095056 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 161 |
| Conread position: | 65-342 |
| Cow position: | chr10:592571-592844 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 65-342 |
| Cow position: | chr10:726765-726488 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 10 |
| Conread position: | 65-384 |
| Cow position: | chr10:69685520-69685833 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 129, 49 |
| Conread position: | 69-335 |
| Cow position: | chr10:68370926-68370660 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 72, 5 |
| Conread position: | 70-315 |
| Cow position: | chr10:42673320-42673566 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 71, 5 |
| Conread position: | 74-304 |
| Cow position: | chr10:64322876-64322639 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 75-255 |
| Cow position: | chr10:41304593-41304787 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 75-314 |
| Cow position: | chr10:38435566-38435331 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 75-342 |
| Cow position: | chr10:12537552-12537816 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 112 |
| Conread position: | 75-342 |
| Cow position: | chr10:58840803-58840533 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 139 |
| Conread position: | 76-255 |
| Cow position: | chr10:1861884-1862062 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 148 |
| Conread position: | 76-276 |
| Cow position: | chr10:13333780-13333975 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 87 |
| Conread position: | 76-315 |
| Cow position: | chr10:21372845-21373079 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 87 |
| Conread position: | 76-321 |
| Cow position: | chr10:55305665-55305429 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 76-322 |
| Cow position: | chr10:63475225-63475460 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 76-323 |
| Cow position: | chr10:23765738-23765499 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 75 |
| Conread position: | 76-323 |
| Cow position: | chr10:52665707-52665468 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 76 |
| Conread position: | 76-323 |
| Cow position: | chr10:55917560-55917327 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 76-323 |
| Cow position: | chr10:67567110-67566869 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 76-327 |
| Cow position: | chr10:52666574-52666818 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 76-330 |
| Cow position: | chr10:32981321-32981076 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 76-333 |
| Cow position: | chr10:54967115-54966878 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 76-334 |
| Cow position: | chr10:16951402-16951147 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 66, 92 |
| Conread position: | 76-334 |
| Cow position: | chr10:23734314-23734065 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 76-334 |
| Cow position: | chr10:62613212-62613461 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 5 |
| Conread position: | 76-335 |
| Cow position: | chr10:63029748-63030000 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 67, 206 |
| Conread position: | 76-342 |
| Cow position: | chr10:52647692-52647433 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 67, 59 |
| Conread position: | 76-392 |
| Cow position: | chr10:29495537-29495850 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 73 |
| Conread position: | 77-334 |
| Cow position: | chr10:46395577-46395826 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 79-335 |
| Cow position: | chr10:15381697-15381439 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 149 |
| Conread position: | 79-392 |
| Cow position: | chr10:63378320-63378621 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 80-336 |
| Cow position: | chr10:3648470-3648724 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 55 |
| Conread position: | 80-362 |
| Cow position: | chr10:4909302-4909022 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 55 |
| Conread position: | 82-335 |
| Cow position: | chr10:34806405-34806650 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 59, 89 |
| Conread position: | 84-341 |
| Cow position: | chr10:7761903-7762161 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 91 |
| Conread position: | 85-381 |
| Cow position: | chr10:28854472-28854762 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 60, 66 |
| Conread position: | 86-395 |
| Cow position: | chr10:66427794-66427486 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 113, 66 |
| Conread position: | 91-392 |
| Cow position: | chr10:10223708-10223409 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 61 |
| Conread position: | 93-394 |
| Cow position: | chr10:14959923-14959621 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 50, 143 |
| Conread position: | 119-334 |
| Cow position: | chr10:36474852-36474642 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 119-334 |
| Cow position: | chr10:40428730-40428519 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 124-334 |
| Cow position: | chr10:50527510-50527714 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 145-363 |
| Cow position: | chr10:65688428-65688646 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 112, 42 |
| Conread position: | 164-335 |
| Cow position: | chr10:42675336-42675508 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 227-338 |
| Cow position: | chr10:46080614-46080726 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.