Cow genome map
Conread name: | rcbl0_006057.y1 |
Conread position: | 52-335 |
Cow position: | chr11:30216101-30216372 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 202 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 91, 34 |
Conread position: | 54-276 |
Cow position: | chr11:2546292-2546067 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 56-335 |
Cow position: | chr11:79726895-79726611 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 202 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 18, 23 |
Conread position: | 59-395 |
Cow position: | chr11:76599660-76599999 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 271 |
Conread position: | 60-330 |
Cow position: | chr11:106487-106215 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 251 |
Conread position: | 65-327 |
Cow position: | chr11:5440992-5441255 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 195 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 77, 86 |
Conread position: | 65-327 |
Cow position: | chr11:62409112-62409360 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 191 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 91, 55 |
Conread position: | 65-335 |
Cow position: | chr11:26305134-26305401 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 202 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 78, 63 |
Conread position: | 65-335 |
Cow position: | chr11:42119254-42119517 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 184 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 130, 83 |
Conread position: | 65-356 |
Cow position: | chr11:58537334-58537631 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 208 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 54, 68 |
Conread position: | 65-368 |
Cow position: | chr11:37334992-37334691 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 164 |
Conread position: | 65-395 |
Cow position: | chr11:14135130-14134798 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 176 |
Conread position: | 68-334 |
Cow position: | chr11:77178580-77178313 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 158 |
Conread position: | 74-321 |
Cow position: | chr11:20990902-20991147 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 190 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 50, 13 |
Conread position: | 74-342 |
Cow position: | chr11:70888068-70888341 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 75-270 |
Cow position: | chr11:76871195-76871393 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 153 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 66, 151 |
Conread position: | 75-312 |
Cow position: | chr11:7044878-7044643 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 173 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 69, 46 |
Conread position: | 75-342 |
Cow position: | chr11:39276726-39276992 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 150 |
Conread position: | 75-372 |
Cow position: | chr11:6575545-6575246 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 241 |
Conread position: | 75-384 |
Cow position: | chr11:5292392-5292691 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 228 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 70, 55 |
Conread position: | 75-385 |
Cow position: | chr11:50649052-50649366 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 76-278 |
Cow position: | chr11:35577314-35577101 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 148 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 76-312 |
Cow position: | chr11:7051159-7050927 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 176 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 172, 38 |
Conread position: | 76-323 |
Cow position: | chr11:9755030-9754794 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 170 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 65, 19 |
Conread position: | 76-334 |
Cow position: | chr11:896488-896745 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 187 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 76-334 |
Cow position: | chr11:4678281-4678025 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 189 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 66, 38 |
Conread position: | 76-334 |
Cow position: | chr11:14353199-14353454 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 188 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 68, 88 |
Conread position: | 76-334 |
Cow position: | chr11:70058034-70058288 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 175 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 67, 87 |
Conread position: | 76-334 |
Cow position: | chr11:72416845-72416593 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 181 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 65, 77 |
Conread position: | 76-334 |
Cow position: | chr11:80192761-80192510 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 184 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 66, 75 |
Conread position: | 76-334 |
Cow position: | chr11:80343605-80343857 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 182 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 66, 75 |
Conread position: | 76-342 |
Cow position: | chr11:30766670-30766936 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 38 |
Conread position: | 76-363 |
Cow position: | chr11:7662585-7662299 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 212 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 65, 73 |
Conread position: | 76-390 |
Cow position: | chr11:64814203-64813888 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 202 |
Conread position: | 78-323 |
Cow position: | chr11:32205682-32205921 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 176 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 24, 73 |
Conread position: | 78-330 |
Cow position: | chr11:32389880-32389631 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 184 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 66, 73 |
Conread position: | 79-335 |
Cow position: | chr11:12167394-12167652 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 189 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 63, 105 |
Conread position: | 79-369 |
Cow position: | chr11:40366784-40366491 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 139 |
Conread position: | 80-272 |
Cow position: | chr11:14673740-14673928 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 138 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 175, 110 |
Conread position: | 80-363 |
Cow position: | chr11:30084159-30084433 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 33 |
Conread position: | 80-395 |
Cow position: | chr11:77161372-77161060 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 72 |
Conread position: | 81-322 |
Cow position: | chr11:63671240-63671474 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 171 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 62, 69 |
Conread position: | 81-333 |
Cow position: | chr11:3177301-3177551 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 176 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 25, 31 |
Conread position: | 81-334 |
Cow position: | chr11:39997213-39997459 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 186 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 61, 87 |
Conread position: | 81-338 |
Cow position: | chr11:49603860-49604110 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 179 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 64, 70 |
Conread position: | 83-269 |
Cow position: | chr11:66869162-66869352 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 138 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 59, 30 |
Conread position: | 83-283 |
Cow position: | chr11:79807888-79807684 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 148 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 84-335 |
Cow position: | chr11:66166464-66166217 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 180 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 68, 32 |
Conread position: | 84-335 |
Cow position: | chr11:70142546-70142806 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 185 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 28, 231 |
Conread position: | 84-392 |
Cow position: | chr11:37319654-37319344 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 67 |
Conread position: | 86-342 |
Cow position: | chr11:26280152-26280401 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 180 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 59, 21 |
Conread position: | 89-342 |
Cow position: | chr11:63275628-63275885 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 194 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 56, 7 |
Conread position: | 92-392 |
Cow position: | chr11:38680101-38679807 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 58 |
Conread position: | 93-330 |
Cow position: | chr11:66034039-66033800 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 169 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 29, 59 |
Conread position: | 93-334 |
Cow position: | chr11:81348000-81347760 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 178 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 51, 129 |
Conread position: | 93-335 |
Cow position: | chr11:72092827-72093065 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 168 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 49, 32 |
Conread position: | 95-334 |
Cow position: | chr11:63988701-63988926 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 167 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 47, 87 |
Conread position: | 101-334 |
Cow position: | chr11:11685077-11684851 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 169 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 41, 67 |
Conread position: | 122-277 |
Cow position: | chr11:35453627-35453469 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 123-395 |
Cow position: | chr11:3160797-3161067 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 200 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 29, 24 |
Conread position: | 159-321 |
Cow position: | chr11:61834185-61834024 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 101, 7 |
Conread position: | 166-392 |
Cow position: | chr11:26232503-26232730 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 167 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 193, 163 |
Show alignments to all cow chromosomes.