Cow genome map

Conread name: rcbl0_006057.y1

Conread position: 52-335
Cow position: chr11:30216101-30216372 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 91, 34

Conread position: 54-276
Cow position: chr11:2546292-2546067 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 56-335
Cow position: chr11:79726895-79726611 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 23

Conread position: 59-395
Cow position: chr11:76599660-76599999 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 271

Conread position: 60-330
Cow position: chr11:106487-106215 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 251

Conread position: 65-327
Cow position: chr11:5440992-5441255 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 86

Conread position: 65-327
Cow position: chr11:62409112-62409360 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 91, 55

Conread position: 65-335
Cow position: chr11:26305134-26305401 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 78, 63

Conread position: 65-335
Cow position: chr11:42119254-42119517 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 130, 83

Conread position: 65-356
Cow position: chr11:58537334-58537631 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 68

Conread position: 65-368
Cow position: chr11:37334992-37334691 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 164

Conread position: 65-395
Cow position: chr11:14135130-14134798 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 176

Conread position: 68-334
Cow position: chr11:77178580-77178313 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 158

Conread position: 74-321
Cow position: chr11:20990902-20991147 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 50, 13

Conread position: 74-342
Cow position: chr11:70888068-70888341 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 75-270
Cow position: chr11:76871195-76871393 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 151

Conread position: 75-312
Cow position: chr11:7044878-7044643 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 46

Conread position: 75-342
Cow position: chr11:39276726-39276992 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 150

Conread position: 75-372
Cow position: chr11:6575545-6575246 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 241

Conread position: 75-384
Cow position: chr11:5292392-5292691 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 55

Conread position: 75-385
Cow position: chr11:50649052-50649366 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 76-278
Cow position: chr11:35577314-35577101 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 76-312
Cow position: chr11:7051159-7050927 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 172, 38

Conread position: 76-323
Cow position: chr11:9755030-9754794 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 19

Conread position: 76-334
Cow position: chr11:896488-896745 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 36

Conread position: 76-334
Cow position: chr11:4678281-4678025 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 66, 38

Conread position: 76-334
Cow position: chr11:14353199-14353454 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 88

Conread position: 76-334
Cow position: chr11:70058034-70058288 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 87

Conread position: 76-334
Cow position: chr11:72416845-72416593 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 77

Conread position: 76-334
Cow position: chr11:80192761-80192510 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 66, 75

Conread position: 76-334
Cow position: chr11:80343605-80343857 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 66, 75

Conread position: 76-342
Cow position: chr11:30766670-30766936 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 38

Conread position: 76-363
Cow position: chr11:7662585-7662299 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 65, 73

Conread position: 76-390
Cow position: chr11:64814203-64813888 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 202

Conread position: 78-323
Cow position: chr11:32205682-32205921 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 73

Conread position: 78-330
Cow position: chr11:32389880-32389631 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 73

Conread position: 79-335
Cow position: chr11:12167394-12167652 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 63, 105

Conread position: 79-369
Cow position: chr11:40366784-40366491 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 139

Conread position: 80-272
Cow position: chr11:14673740-14673928 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 175, 110

Conread position: 80-363
Cow position: chr11:30084159-30084433 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 33

Conread position: 80-395
Cow position: chr11:77161372-77161060 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 72

Conread position: 81-322
Cow position: chr11:63671240-63671474 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 69

Conread position: 81-333
Cow position: chr11:3177301-3177551 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 31

Conread position: 81-334
Cow position: chr11:39997213-39997459 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 61, 87

Conread position: 81-338
Cow position: chr11:49603860-49604110 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 70

Conread position: 83-269
Cow position: chr11:66869162-66869352 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 30

Conread position: 83-283
Cow position: chr11:79807888-79807684 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 84-335
Cow position: chr11:66166464-66166217 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 68, 32

Conread position: 84-335
Cow position: chr11:70142546-70142806 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 231

Conread position: 84-392
Cow position: chr11:37319654-37319344 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 67

Conread position: 86-342
Cow position: chr11:26280152-26280401 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 21

Conread position: 89-342
Cow position: chr11:63275628-63275885 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 56, 7

Conread position: 92-392
Cow position: chr11:38680101-38679807 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 58

Conread position: 93-330
Cow position: chr11:66034039-66033800 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 29, 59

Conread position: 93-334
Cow position: chr11:81348000-81347760 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 51, 129

Conread position: 93-335
Cow position: chr11:72092827-72093065 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 32

Conread position: 95-334
Cow position: chr11:63988701-63988926 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 87

Conread position: 101-334
Cow position: chr11:11685077-11684851 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 41, 67

Conread position: 122-277
Cow position: chr11:35453627-35453469 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 123-395
Cow position: chr11:3160797-3161067 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 24

Conread position: 159-321
Cow position: chr11:61834185-61834024 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 101, 7

Conread position: 166-392
Cow position: chr11:26232503-26232730 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 193, 163

Show alignments to all cow chromosomes.