Cow genome map
| Conread name: | rcbl0_006057.y1 |
| Conread position: | 50-277 |
| Cow position: | chr12:26174630-26174407 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 94, 168 |
| Conread position: | 56-342 |
| Cow position: | chr12:15072676-15072954 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 15, 21 |
| Conread position: | 59-334 |
| Cow position: | chr12:15365466-15365750 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 86, 57 |
| Conread position: | 60-342 |
| Cow position: | chr12:31608585-31608865 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 65-304 |
| Cow position: | chr12:41778064-41777828 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 65-312 |
| Cow position: | chr12:39552014-39551765 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 65-324 |
| Cow position: | chr12:35638958-35638710 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 79, 7 |
| Conread position: | 65-327 |
| Cow position: | chr12:20225752-20225497 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 76, 115 |
| Conread position: | 65-331 |
| Cow position: | chr12:34395722-34395457 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 183, 35 |
| Conread position: | 65-335 |
| Cow position: | chr12:39114955-39115213 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 80, 53 |
| Conread position: | 65-335 |
| Cow position: | chr12:42940834-42941101 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 77, 159 |
| Conread position: | 65-342 |
| Cow position: | chr12:8494252-8493967 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 80, 53 |
| Conread position: | 65-370 |
| Cow position: | chr12:42786021-42786315 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 130, 93 |
| Conread position: | 65-381 |
| Cow position: | chr12:2005353-2005044 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 65-389 |
| Cow position: | chr12:6931563-6931889 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 65-395 |
| Cow position: | chr12:45703744-45704072 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 65-396 |
| Cow position: | chr12:13634920-13634596 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 77, 106 |
| Conread position: | 66-363 |
| Cow position: | chr12:16081615-16081913 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 174 |
| Conread position: | 67-384 |
| Cow position: | chr12:31870853-31871175 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 88 |
| Conread position: | 70-318 |
| Cow position: | chr12:40549208-40548957 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 5 |
| Conread position: | 74-342 |
| Cow position: | chr12:21268691-21268419 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 72, 152 |
| Conread position: | 75-330 |
| Cow position: | chr12:11213348-11213093 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 69, 164 |
| Conread position: | 75-334 |
| Cow position: | chr12:4146066-4146323 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 147 |
| Conread position: | 75-341 |
| Cow position: | chr12:34597700-34597961 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 69, 89 |
| Conread position: | 75-344 |
| Cow position: | chr12:16352268-16352539 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 66, 77 |
| Conread position: | 75-351 |
| Cow position: | chr12:26292479-26292756 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 76-276 |
| Cow position: | chr12:10854312-10854119 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 76-330 |
| Cow position: | chr12:8963803-8963560 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 186, 41 |
| Conread position: | 76-330 |
| Cow position: | chr12:36251703-36251460 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 76-332 |
| Cow position: | chr12:9013897-9014143 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 76-394 |
| Cow position: | chr12:5982144-5982473 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 69 |
| Conread position: | 78-342 |
| Cow position: | chr12:39177476-39177732 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 80-363 |
| Cow position: | chr12:36069078-36069360 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 164 |
| Conread position: | 80-392 |
| Cow position: | chr12:16908579-16908887 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 84-335 |
| Cow position: | chr12:39937549-39937297 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 60, 89 |
| Conread position: | 85-335 |
| Cow position: | chr12:30531958-30531709 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 56, 145 |
| Conread position: | 91-395 |
| Cow position: | chr12:15131949-15131642 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 119-330 |
| Cow position: | chr12:30231708-30231916 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 119-334 |
| Cow position: | chr12:5251295-5251087 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 125-335 |
| Cow position: | chr12:14958407-14958193 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 169-332 |
| Cow position: | chr12:27133559-27133395 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 170-335 |
| Cow position: | chr12:30446356-30446523 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 173-334 |
| Cow position: | chr12:9277048-9276885 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 230-334 |
| Cow position: | chr12:17691219-17691114 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 235-395 |
| Cow position: | chr12:32865817-32865656 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 267-395 |
| Cow position: | chr12:26174188-26174058 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
Show alignments to all cow chromosomes.