Cow genome map
| Conread name: | rcbl0_006057.y1 |
| Conread position: | 53-342 |
| Cow position: | chr13:20630440-20630727 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 171 |
| Conread position: | 57-351 |
| Cow position: | chr13:20267882-20268181 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 142, 45 |
| Conread position: | 60-335 |
| Cow position: | chr13:42649444-42649710 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 191, 85 |
| Conread position: | 67-316 |
| Cow position: | chr13:43712262-43712509 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 85, 45 |
| Conread position: | 67-335 |
| Cow position: | chr13:31437262-31437531 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 170 |
| Conread position: | 67-342 |
| Cow position: | chr13:55952999-55952724 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 61 |
| Conread position: | 67-363 |
| Cow position: | chr13:6349794-6350088 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 77 |
| Conread position: | 68-392 |
| Cow position: | chr13:8644077-8643749 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 170 |
| Conread position: | 74-289 |
| Cow position: | chr13:2772296-2772516 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 75-335 |
| Cow position: | chr13:6333637-6333889 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 68, 138 |
| Conread position: | 75-342 |
| Cow position: | chr13:14610968-14610707 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 49 |
| Conread position: | 75-342 |
| Cow position: | chr13:25786150-25785884 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 116, 25 |
| Conread position: | 75-380 |
| Cow position: | chr13:41201724-41201417 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 149 |
| Conread position: | 76-201 |
| Cow position: | chr13:22945082-22944956 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 76-335 |
| Cow position: | chr13:25342945-25343204 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 205 |
| Conread position: | 76-337 |
| Cow position: | chr13:17935452-17935717 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 76-363 |
| Cow position: | chr13:26367282-26366993 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 66, 255 |
| Conread position: | 76-363 |
| Cow position: | chr13:51135475-51135775 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 68, 74 |
| Conread position: | 76-389 |
| Cow position: | chr13:48203763-48204066 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 80-338 |
| Cow position: | chr13:12985979-12986238 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 95 |
| Conread position: | 80-391 |
| Cow position: | chr13:56231695-56232005 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 69 |
| Conread position: | 80-392 |
| Cow position: | chr13:55383312-55382991 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 62, 155 |
| Conread position: | 80-395 |
| Cow position: | chr13:44434002-44433688 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 71 |
| Conread position: | 81-330 |
| Cow position: | chr13:15853687-15853443 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 62, 83 |
| Conread position: | 81-331 |
| Cow position: | chr13:53826627-53826878 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 106 |
| Conread position: | 85-336 |
| Cow position: | chr13:13498265-13498512 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 85-342 |
| Cow position: | chr13:16809931-16810199 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 86-363 |
| Cow position: | chr13:25792061-25792342 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 59, 138 |
| Conread position: | 93-335 |
| Cow position: | chr13:19328151-19327907 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 94-296 |
| Cow position: | chr13:36323063-36322860 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 27 |
| Conread position: | 106-394 |
| Cow position: | chr13:56227373-56227664 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 229 |
| Conread position: | 123-342 |
| Cow position: | chr13:25347289-25347499 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 140-391 |
| Cow position: | chr13:17129616-17129873 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 12, 196 |
| Conread position: | 150-344 |
| Cow position: | chr13:51091095-51091289 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 107, 180 |
| Conread position: | 154-334 |
| Cow position: | chr13:27228039-27228218 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 196-395 |
| Cow position: | chr13:20460802-20460606 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 60, 109 |
| Conread position: | 207-330 |
| Cow position: | chr13:22944716-22944592 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.