Cow genome map
| Conread name: | rcbl0_006057.y1 |
| Conread position: | 57-381 |
| Cow position: | chr18:4699643-4699313 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 51, 176 |
| Conread position: | 62-395 |
| Cow position: | chr18:29885057-29884733 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 52 |
| Conread position: | 65-304 |
| Cow position: | chr18:25694049-25694287 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 84 |
| Conread position: | 65-313 |
| Cow position: | chr18:52467504-52467753 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 191, 116 |
| Conread position: | 65-324 |
| Cow position: | chr18:35086875-35087137 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 67-381 |
| Cow position: | chr18:11268401-11268719 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 69-289 |
| Cow position: | chr18:8211339-8211113 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 74, 6 |
| Conread position: | 74-405 |
| Cow position: | chr18:46883524-46883187 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 119, 48 |
| Conread position: | 75-294 |
| Cow position: | chr18:4177103-4176883 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 116, 140 |
| Conread position: | 75-363 |
| Cow position: | chr18:46865211-46864925 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 76-323 |
| Cow position: | chr18:9257219-9257459 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 76-323 |
| Cow position: | chr18:15807644-15807405 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 76-323 |
| Cow position: | chr18:15946654-15946402 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 76-323 |
| Cow position: | chr18:49386544-49386304 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 30, 47 |
| Conread position: | 76-323 |
| Cow position: | chr18:54128136-54128376 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 76-333 |
| Cow position: | chr18:25694946-25694691 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 76-342 |
| Cow position: | chr18:37078502-37078763 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 76-392 |
| Cow position: | chr18:12778907-12779223 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 76-395 |
| Cow position: | chr18:30228766-30228470 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 181, 67 |
| Conread position: | 77-335 |
| Cow position: | chr18:47294115-47293863 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 78-264 |
| Cow position: | chr18:44137872-44137684 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 64, 110 |
| Conread position: | 80-380 |
| Cow position: | chr18:24636238-24635954 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 82-293 |
| Cow position: | chr18:16054460-16054681 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 82-335 |
| Cow position: | chr18:3689239-3689486 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 181, 68 |
| Conread position: | 83-285 |
| Cow position: | chr18:32199557-32199356 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 83-335 |
| Cow position: | chr18:54063436-54063689 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 59, 91 |
| Conread position: | 83-336 |
| Cow position: | chr18:13788143-13788398 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 72 |
| Conread position: | 86-392 |
| Cow position: | chr18:51779738-51780038 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 138 |
| Conread position: | 91-392 |
| Cow position: | chr18:24798849-24799150 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 60 |
| Conread position: | 91-395 |
| Cow position: | chr18:51803829-51804133 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 93 |
| Conread position: | 91-397 |
| Cow position: | chr18:20945214-20945538 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 255 |
| Conread position: | 97-301 |
| Cow position: | chr18:48310578-48310374 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 31, 129 |
| Conread position: | 100-334 |
| Cow position: | chr18:25700556-25700790 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 111-334 |
| Cow position: | chr18:40701714-40701932 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 120-342 |
| Cow position: | chr18:9017615-9017839 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 157-334 |
| Cow position: | chr18:8283822-8283999 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 103, 12 |
| Conread position: | 168-335 |
| Cow position: | chr18:51410091-51409921 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 5 |
| Conread position: | 194-395 |
| Cow position: | chr18:25670237-25670442 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 246-342 |
| Cow position: | chr18:44137203-44137106 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.