Cow genome map
| Conread name: | rcbl0_006057.y1 |
| Conread position: | 54-395 |
| Cow position: | chr2:81185671-81186003 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 76 |
| Conread position: | 55-334 |
| Cow position: | chr2:58461533-58461251 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 121 |
| Conread position: | 56-335 |
| Cow position: | chr2:40021381-40021101 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 88, 118 |
| Conread position: | 58-321 |
| Cow position: | chr2:46566543-46566809 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 137, 29 |
| Conread position: | 58-352 |
| Cow position: | chr2:35978908-35978629 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 137, 158 |
| Conread position: | 58-395 |
| Cow position: | chr2:35984851-35984514 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 163 |
| Conread position: | 61-324 |
| Cow position: | chr2:47150191-47149928 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 82, 60 |
| Conread position: | 63-327 |
| Cow position: | chr2:68157850-68157594 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 65-244 |
| Cow position: | chr2:83145251-83145074 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 6, 14 |
| Conread position: | 65-260 |
| Cow position: | chr2:45934661-45934471 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 65-276 |
| Cow position: | chr2:65721381-65721171 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 158 |
| Conread position: | 65-282 |
| Cow position: | chr2:32893204-32892984 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 53, 173 |
| Conread position: | 65-312 |
| Cow position: | chr2:7293118-7293367 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 65-312 |
| Cow position: | chr2:16800273-16800024 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 129, 49 |
| Conread position: | 65-312 |
| Cow position: | chr2:41586364-41586119 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 49 |
| Conread position: | 65-312 |
| Cow position: | chr2:46772502-46772751 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 49 |
| Conread position: | 65-335 |
| Cow position: | chr2:49909434-49909170 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 145 |
| Conread position: | 65-342 |
| Cow position: | chr2:46565290-46565013 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 175 |
| Conread position: | 65-344 |
| Cow position: | chr2:35453116-35453395 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 53 |
| Conread position: | 65-350 |
| Cow position: | chr2:85383603-85383332 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 77, 149 |
| Conread position: | 65-367 |
| Cow position: | chr2:29191601-29191900 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 79, 49 |
| Conread position: | 66-392 |
| Cow position: | chr2:45927970-45927651 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 66-392 |
| Cow position: | chr2:86327251-86326916 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 67-380 |
| Cow position: | chr2:66670858-66671175 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 68-272 |
| Cow position: | chr2:39871413-39871617 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 74, 168 |
| Conread position: | 68-405 |
| Cow position: | chr2:40853062-40853398 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 74, 53 |
| Conread position: | 69-342 |
| Cow position: | chr2:21336269-21336538 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 76 |
| Conread position: | 75-323 |
| Cow position: | chr2:28915908-28916147 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 66, 76 |
| Conread position: | 75-335 |
| Cow position: | chr2:44972420-44972670 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 110, 59 |
| Conread position: | 75-341 |
| Cow position: | chr2:12565906-12565637 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 69, 45 |
| Conread position: | 75-342 |
| Cow position: | chr2:25375587-25375854 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 152 |
| Conread position: | 75-342 |
| Cow position: | chr2:36855059-36855322 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 75-342 |
| Cow position: | chr2:39255035-39255296 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 42 |
| Conread position: | 75-342 |
| Cow position: | chr2:64308090-64308372 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 165, 70 |
| Conread position: | 75-352 |
| Cow position: | chr2:46567268-46566995 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 70, 150 |
| Conread position: | 75-395 |
| Cow position: | chr2:41779284-41778966 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 151 |
| Conread position: | 76-232 |
| Cow position: | chr2:3627182-3627027 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 141 |
| Conread position: | 76-304 |
| Cow position: | chr2:9393932-9393717 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 65, 87 |
| Conread position: | 76-317 |
| Cow position: | chr2:69134057-69133818 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 76-323 |
| Cow position: | chr2:19741024-19741264 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 184, 86 |
| Conread position: | 76-323 |
| Cow position: | chr2:68349743-68349983 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 76-323 |
| Cow position: | chr2:82301657-82301418 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 76-330 |
| Cow position: | chr2:12768342-12768093 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 76, 87 |
| Conread position: | 76-333 |
| Cow position: | chr2:20910117-20910379 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 76-334 |
| Cow position: | chr2:3472617-3472365 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 76-334 |
| Cow position: | chr2:12693006-12693257 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 76-334 |
| Cow position: | chr2:33630908-33630655 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 66, 92 |
| Conread position: | 76-334 |
| Cow position: | chr2:43335032-43334777 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 68, 88 |
| Conread position: | 76-334 |
| Cow position: | chr2:64658174-64657922 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 76-335 |
| Cow position: | chr2:29418411-29418664 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 68 |
| Conread position: | 76-336 |
| Cow position: | chr2:24508639-24508905 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 76-342 |
| Cow position: | chr2:44039518-44039775 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 70, 124 |
| Conread position: | 76-342 |
| Cow position: | chr2:44683542-44683802 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 87 |
| Conread position: | 76-342 |
| Cow position: | chr2:82293939-82293682 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 178, 41 |
| Conread position: | 76-344 |
| Cow position: | chr2:1479961-1479700 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 66, 92 |
| Conread position: | 76-384 |
| Cow position: | chr2:85009684-85009990 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 111 |
| Conread position: | 76-396 |
| Cow position: | chr2:69131401-69131066 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 169 |
| Conread position: | 77-336 |
| Cow position: | chr2:36417015-36417292 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 78-189 |
| Cow position: | chr2:46205201-46205090 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 78-330 |
| Cow position: | chr2:37365918-37366171 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 64, 194 |
| Conread position: | 80-384 |
| Cow position: | chr2:15263847-15263553 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 62, 34 |
| Conread position: | 81-330 |
| Cow position: | chr2:47554024-47554265 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 81-334 |
| Cow position: | chr2:7316593-7316840 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 175, 63 |
| Conread position: | 81-387 |
| Cow position: | chr2:35971757-35971442 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 13, 153 |
| Conread position: | 101-303 |
| Cow position: | chr2:70467743-70467939 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 150, 61 |
| Conread position: | 119-299 |
| Cow position: | chr2:47380303-47380479 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 119-315 |
| Cow position: | chr2:40299867-40299675 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 119-334 |
| Cow position: | chr2:44980006-44979794 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 122-335 |
| Cow position: | chr2:44546715-44546921 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 123-269 |
| Cow position: | chr2:60318842-60318696 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 134, 26 |
| Conread position: | 124-364 |
| Cow position: | chr2:9946994-9946766 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 143-323 |
| Cow position: | chr2:80805115-80804932 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 143-395 |
| Cow position: | chr2:68426714-68426966 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 163-336 |
| Cow position: | chr2:23043611-23043436 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 170-334 |
| Cow position: | chr2:56300392-56300558 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 174-335 |
| Cow position: | chr2:34292838-34293001 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 219-395 |
| Cow position: | chr2:46205029-46204852 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 110 |
Show alignments to all cow chromosomes.