Cow genome map
| Conread name: | rcbl0_006057.y1 |
| Conread position: | 54-334 |
| Cow position: | chr20:35961954-35962220 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 147, 87 |
| Conread position: | 56-336 |
| Cow position: | chr20:13282049-13282333 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 56-392 |
| Cow position: | chr20:22412995-22412680 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 90, 13 |
| Conread position: | 65-323 |
| Cow position: | chr20:38726256-38726505 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 108 |
| Conread position: | 65-324 |
| Cow position: | chr20:33772978-33773243 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 77, 116 |
| Conread position: | 65-334 |
| Cow position: | chr20:19490429-19490699 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 166 |
| Conread position: | 65-335 |
| Cow position: | chr20:13083540-13083268 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 55 |
| Conread position: | 65-335 |
| Cow position: | chr20:22681906-22682167 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 65-337 |
| Cow position: | chr20:13124568-13124848 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 65-342 |
| Cow position: | chr20:35434804-35434540 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 65-396 |
| Cow position: | chr20:37059412-37059078 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 265 |
| Conread position: | 67-342 |
| Cow position: | chr20:23921758-23921492 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 131, 211 |
| Conread position: | 71-389 |
| Cow position: | chr20:41157581-41157260 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 148 |
| Conread position: | 74-335 |
| Cow position: | chr20:1511560-1511809 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 74-342 |
| Cow position: | chr20:37911131-37910866 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 90 |
| Conread position: | 74-373 |
| Cow position: | chr20:2227298-2226989 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 216 |
| Conread position: | 75-313 |
| Cow position: | chr20:38031942-38032180 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 66, 74 |
| Conread position: | 76-308 |
| Cow position: | chr20:31440193-31439968 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 184, 67 |
| Conread position: | 76-323 |
| Cow position: | chr20:3531748-3531987 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 76-323 |
| Cow position: | chr20:28137509-28137749 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 76-334 |
| Cow position: | chr20:17674216-17673966 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 76-342 |
| Cow position: | chr20:35251762-35251500 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 75, 106 |
| Conread position: | 76-363 |
| Cow position: | chr20:8964957-8964663 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 65, 86 |
| Conread position: | 78-352 |
| Cow position: | chr20:19030511-19030786 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 85 |
| Conread position: | 79-289 |
| Cow position: | chr20:14592249-14592033 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 80-267 |
| Cow position: | chr20:649173-649362 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 80-384 |
| Cow position: | chr20:33098412-33098103 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 138, 65 |
| Conread position: | 80-398 |
| Cow position: | chr20:24340098-24340413 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 68 |
| Conread position: | 81-333 |
| Cow position: | chr20:36326131-36325877 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 82-363 |
| Cow position: | chr20:8297812-8298091 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 70 |
| Conread position: | 84-321 |
| Cow position: | chr20:10508135-10508374 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 60, 216 |
| Conread position: | 85-334 |
| Cow position: | chr20:40527432-40527188 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 95-335 |
| Cow position: | chr20:33132554-33132786 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 79 |
| Conread position: | 97-395 |
| Cow position: | chr20:25038899-25039198 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 55 |
| Conread position: | 101-335 |
| Cow position: | chr20:33711678-33711453 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 102-335 |
| Cow position: | chr20:33667484-33667714 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 107-342 |
| Cow position: | chr20:35181741-35181514 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 88, 27 |
| Conread position: | 119-334 |
| Cow position: | chr20:35639689-35639477 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 127-393 |
| Cow position: | chr20:13079913-13080187 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 7, 209 |
| Conread position: | 133-332 |
| Cow position: | chr20:3077200-3077005 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 124, 11 |
| Conread position: | 150-395 |
| Cow position: | chr20:40204162-40203919 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 186-342 |
| Cow position: | chr20:31431264-31431111 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 5, 35 |
Show alignments to all cow chromosomes.