Cow genome map
| Conread name: | rcbl0_006057.y1 |
| Conread position: | 62-289 |
| Cow position: | chr21:4054739-4054491 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 83, 13 |
| Conread position: | 63-334 |
| Cow position: | chr21:3966630-3966884 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 12 |
| Conread position: | 65-312 |
| Cow position: | chr21:3475218-3475462 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 131, 49 |
| Conread position: | 65-312 |
| Cow position: | chr21:47962473-47962720 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 49 |
| Conread position: | 65-342 |
| Cow position: | chr21:17788353-17788064 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 65-342 |
| Cow position: | chr21:19092728-19092461 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 70-289 |
| Cow position: | chr21:41565889-41566112 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 81, 5 |
| Conread position: | 74-330 |
| Cow position: | chr21:10556567-10556308 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 75-339 |
| Cow position: | chr21:18572028-18571764 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 222 |
| Conread position: | 75-342 |
| Cow position: | chr21:18171988-18171723 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 147 |
| Conread position: | 75-342 |
| Cow position: | chr21:42179606-42179876 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 76-324 |
| Cow position: | chr21:24935525-24935766 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 76-330 |
| Cow position: | chr21:6729115-6729365 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 76-330 |
| Cow position: | chr21:36212312-36212066 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 120, 71 |
| Conread position: | 76-334 |
| Cow position: | chr21:14787557-14787306 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 68, 85 |
| Conread position: | 76-334 |
| Cow position: | chr21:42853811-42853554 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 68, 92 |
| Conread position: | 76-335 |
| Cow position: | chr21:19867007-19866754 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 66, 87 |
| Conread position: | 76-355 |
| Cow position: | chr21:20016241-20015959 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 258 |
| Conread position: | 77-334 |
| Cow position: | chr21:28391545-28391794 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 174, 85 |
| Conread position: | 78-330 |
| Cow position: | chr21:32404499-32404746 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 79-342 |
| Cow position: | chr21:13860876-13861137 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 80-342 |
| Cow position: | chr21:18485953-18485685 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 104, 37 |
| Conread position: | 80-384 |
| Cow position: | chr21:28768174-28768485 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 81-334 |
| Cow position: | chr21:40644925-40644679 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 81-395 |
| Cow position: | chr21:2802844-2802533 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 82-392 |
| Cow position: | chr21:21407883-21407570 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 84-395 |
| Cow position: | chr21:8375770-8375468 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 32 |
| Conread position: | 87-341 |
| Cow position: | chr21:47356714-47356457 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 57, 62 |
| Conread position: | 95-333 |
| Cow position: | chr21:7402856-7402619 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 105, 23 |
| Conread position: | 119-344 |
| Cow position: | chr21:42228039-42227818 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 119-395 |
| Cow position: | chr21:35322657-35322939 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 126-395 |
| Cow position: | chr21:41070439-41070708 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 141-335 |
| Cow position: | chr21:23236817-23236619 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 147-327 |
| Cow position: | chr21:41413418-41413236 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 169-327 |
| Cow position: | chr21:36667197-36667038 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 197-392 |
| Cow position: | chr21:12208641-12208450 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 226-392 |
| Cow position: | chr21:40725024-40724860 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 104 |
| Conread position: | 246-342 |
| Cow position: | chr21:36209962-36209865 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
Show alignments to all cow chromosomes.