Cow genome map
| Conread name: | rcbl0_006057.y1 |
| Conread position: | 39-296 |
| Cow position: | chr4:12652339-12652079 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 53-334 |
| Cow position: | chr4:14424369-14424094 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 56-333 |
| Cow position: | chr4:10980361-10980092 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 140, 89 |
| Conread position: | 56-373 |
| Cow position: | chr4:48235886-48236200 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 61 |
| Conread position: | 59-261 |
| Cow position: | chr4:36220445-36220248 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 65-312 |
| Cow position: | chr4:5228960-5228714 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 185, 16 |
| Conread position: | 65-312 |
| Cow position: | chr4:12226617-12226862 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 129, 49 |
| Conread position: | 65-312 |
| Cow position: | chr4:14528538-14528289 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 49 |
| Conread position: | 65-335 |
| Cow position: | chr4:11169021-11169294 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 78, 155 |
| Conread position: | 65-335 |
| Cow position: | chr4:28285793-28286068 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 77, 10 |
| Conread position: | 65-335 |
| Cow position: | chr4:65944719-65944455 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 134, 57 |
| Conread position: | 65-336 |
| Cow position: | chr4:3463730-3464004 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 65-383 |
| Cow position: | chr4:66835670-66835991 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 246 |
| Conread position: | 65-385 |
| Cow position: | chr4:61152008-61152328 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 74-335 |
| Cow position: | chr4:13150294-13150561 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 23, 146 |
| Conread position: | 75-291 |
| Cow position: | chr4:28223797-28224014 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 67, 148 |
| Conread position: | 75-336 |
| Cow position: | chr4:59531548-59531812 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 75-341 |
| Cow position: | chr4:32024846-32024582 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 66, 152 |
| Conread position: | 75-342 |
| Cow position: | chr4:44085920-44086189 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 76-323 |
| Cow position: | chr4:23122682-23122442 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 44, 33 |
| Conread position: | 76-324 |
| Cow position: | chr4:64673725-64673483 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 66, 79 |
| Conread position: | 76-327 |
| Cow position: | chr4:32796345-32796589 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 76-330 |
| Cow position: | chr4:29905785-29905540 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 76-333 |
| Cow position: | chr4:31596865-31596603 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 76-334 |
| Cow position: | chr4:47132400-47132651 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 76-335 |
| Cow position: | chr4:57717304-57717049 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 66, 92 |
| Conread position: | 76-335 |
| Cow position: | chr4:60094120-60093870 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 186, 70 |
| Conread position: | 76-342 |
| Cow position: | chr4:67567916-67568174 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 65, 92 |
| Conread position: | 76-384 |
| Cow position: | chr4:63394217-63393919 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 76-384 |
| Cow position: | chr4:63398814-63398512 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 77-335 |
| Cow position: | chr4:45451301-45451552 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 92 |
| Conread position: | 77-384 |
| Cow position: | chr4:58431870-58431562 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 74 |
| Conread position: | 78-363 |
| Cow position: | chr4:3868548-3868832 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 71 |
| Conread position: | 78-392 |
| Cow position: | chr4:42980890-42981208 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 272 |
| Conread position: | 79-392 |
| Cow position: | chr4:14480410-14480103 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 62, 144 |
| Conread position: | 80-320 |
| Cow position: | chr4:18006342-18006108 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 65, 120 |
| Conread position: | 80-335 |
| Cow position: | chr4:44621629-44621885 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 80-342 |
| Cow position: | chr4:43420836-43420572 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 95 |
| Conread position: | 80-355 |
| Cow position: | chr4:42485298-42485570 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 81-392 |
| Cow position: | chr4:43465824-43465518 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 70 |
| Conread position: | 82-387 |
| Cow position: | chr4:54142171-54141868 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 102 |
| Conread position: | 84-282 |
| Cow position: | chr4:64369766-64369572 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 129 |
| Conread position: | 124-315 |
| Cow position: | chr4:7983351-7983530 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 137-334 |
| Cow position: | chr4:12701899-12702093 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 138-334 |
| Cow position: | chr4:57725774-57725583 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 125, 29 |
| Conread position: | 163-363 |
| Cow position: | chr4:38925546-38925743 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 167-332 |
| Cow position: | chr4:41123339-41123174 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 5 |
| Conread position: | 169-323 |
| Cow position: | chr4:7160629-7160474 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 170-344 |
| Cow position: | chr4:14576295-14576119 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 171-323 |
| Cow position: | chr4:67562698-67562545 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 175-310 |
| Cow position: | chr4:44754012-44753874 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 232-342 |
| Cow position: | chr4:36494306-36494195 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.