Cow genome map

Conread name: rcbl0_006057.y1

Conread position: 64-312
Cow position: chr5:8764588-8764338 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 50

Conread position: 65-211
Cow position: chr5:45197177-45197327 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 65-211
Cow position: chr5:58439562-58439414 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 65-264
Cow position: chr5:51921088-51921291 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 65-304
Cow position: chr5:12219456-12219217 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 175

Conread position: 65-310
Cow position: chr5:5058737-5058500 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 28

Conread position: 65-310
Cow position: chr5:24888884-24888638 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 77, 49

Conread position: 65-312
Cow position: chr5:47996200-47996450 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 48

Conread position: 65-312
Cow position: chr5:48135949-48135707 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 76, 37

Conread position: 65-335
Cow position: chr5:23742662-23742395 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 79, 159

Conread position: 65-395
Cow position: chr5:18585285-18584952 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 212

Conread position: 65-395
Cow position: chr5:21514584-21514896 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 52

Conread position: 65-395
Cow position: chr5:75573094-75573425 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 285

Conread position: 66-335
Cow position: chr5:31511854-31512107 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 66-392
Cow position: chr5:47619297-47619623 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 157

Conread position: 67-335
Cow position: chr5:25896126-25896394 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 84, 158

Conread position: 69-334
Cow position: chr5:17737348-17737081 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 73, 24

Conread position: 70-289
Cow position: chr5:18657829-18657605 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 5

Conread position: 70-289
Cow position: chr5:47991407-47991630 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 71, 5

Conread position: 75-324
Cow position: chr5:42820482-42820233 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 75

Conread position: 75-335
Cow position: chr5:9969770-9969511 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 43

Conread position: 75-385
Cow position: chr5:64103718-64104031 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 154

Conread position: 75-392
Cow position: chr5:42183124-42183442 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 257

Conread position: 76-323
Cow position: chr5:24456150-24456388 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 10

Conread position: 76-323
Cow position: chr5:46273104-46273344 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 75

Conread position: 76-323
Cow position: chr5:73887692-73887935 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 78

Conread position: 76-330
Cow position: chr5:42099782-42100027 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 87

Conread position: 76-334
Cow position: chr5:13421221-13420969 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 65, 74

Conread position: 76-334
Cow position: chr5:47358072-47357823 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 184, 87

Conread position: 76-334
Cow position: chr5:60969506-60969253 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 175, 69

Conread position: 76-339
Cow position: chr5:21043187-21042920 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 124

Conread position: 76-342
Cow position: chr5:70705279-70705018 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 65, 113

Conread position: 76-379
Cow position: chr5:19914794-19914496 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 38

Conread position: 76-381
Cow position: chr5:23628729-23628424 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 44

Conread position: 76-392
Cow position: chr5:29536797-29537125 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 266

Conread position: 76-392
Cow position: chr5:47771617-47771930 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 41, 24

Conread position: 76-395
Cow position: chr5:66106922-66106599 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 287

Conread position: 77-333
Cow position: chr5:70720485-70720736 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 118, 71

Conread position: 80-334
Cow position: chr5:64039157-64038905 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 62, 84

Conread position: 80-363
Cow position: chr5:30204820-30204546 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 83

Conread position: 80-363
Cow position: chr5:63515616-63515892 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 61, 72

Conread position: 84-392
Cow position: chr5:48275002-48275312 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 60, 84

Conread position: 85-335
Cow position: chr5:73480070-73480319 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 15

Conread position: 85-347
Cow position: chr5:37372342-37372070 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 85-395
Cow position: chr5:72939388-72939700 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 59, 22

Conread position: 86-324
Cow position: chr5:29076234-29075991 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 91-395
Cow position: chr5:2441014-2441318 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 239

Conread position: 91-395
Cow position: chr5:47839717-47840025 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 27, 100

Conread position: 93-383
Cow position: chr5:64796430-64796141 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 58

Conread position: 100-389
Cow position: chr5:42785361-42785653 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 183

Conread position: 102-335
Cow position: chr5:49920562-49920328 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 44, 72

Conread position: 109-283
Cow position: chr5:27996113-27995936 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 84

Conread position: 119-342
Cow position: chr5:67962622-67962403 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 44

Conread position: 122-323
Cow position: chr5:9368866-9368672 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 30

Conread position: 122-335
Cow position: chr5:53638299-53638087 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 40

Conread position: 172-334
Cow position: chr5:74780371-74780208 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 140, 26

Conread position: 222-382
Cow position: chr5:18710026-18709868 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 127

Conread position: 234-335
Cow position: chr5:58439412-58439310 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 0

Show alignments to all cow chromosomes.