Cow genome map
Conread name: | rcbl0_006057.y1 |
Conread position: | 64-312 |
Cow position: | chr5:8764588-8764338 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 50 |
Conread position: | 65-211 |
Cow position: | chr5:45197177-45197327 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 112 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 65-211 |
Cow position: | chr5:58439562-58439414 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 65-264 |
Cow position: | chr5:51921088-51921291 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 146 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 65-304 |
Cow position: | chr5:12219456-12219217 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 175 |
Conread position: | 65-310 |
Cow position: | chr5:5058737-5058500 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 170 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 80, 28 |
Conread position: | 65-310 |
Cow position: | chr5:24888884-24888638 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 187 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 77, 49 |
Conread position: | 65-312 |
Cow position: | chr5:47996200-47996450 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 48 |
Conread position: | 65-312 |
Cow position: | chr5:48135949-48135707 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 189 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 76, 37 |
Conread position: | 65-335 |
Cow position: | chr5:23742662-23742395 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 188 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 79, 159 |
Conread position: | 65-395 |
Cow position: | chr5:18585285-18584952 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 212 |
Conread position: | 65-395 |
Cow position: | chr5:21514584-21514896 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 52 |
Conread position: | 65-395 |
Cow position: | chr5:75573094-75573425 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 285 |
Conread position: | 66-335 |
Cow position: | chr5:31511854-31512107 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 179 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 66-392 |
Cow position: | chr5:47619297-47619623 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 157 |
Conread position: | 67-335 |
Cow position: | chr5:25896126-25896394 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 198 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 84, 158 |
Conread position: | 69-334 |
Cow position: | chr5:17737348-17737081 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 191 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 73, 24 |
Conread position: | 70-289 |
Cow position: | chr5:18657829-18657605 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 167 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 71, 5 |
Conread position: | 70-289 |
Cow position: | chr5:47991407-47991630 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 171 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 71, 5 |
Conread position: | 75-324 |
Cow position: | chr5:42820482-42820233 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 75 |
Conread position: | 75-335 |
Cow position: | chr5:9969770-9969511 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 43 |
Conread position: | 75-385 |
Cow position: | chr5:64103718-64104031 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 154 |
Conread position: | 75-392 |
Cow position: | chr5:42183124-42183442 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 257 |
Conread position: | 76-323 |
Cow position: | chr5:24456150-24456388 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 173 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 65, 10 |
Conread position: | 76-323 |
Cow position: | chr5:46273104-46273344 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 171 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 65, 75 |
Conread position: | 76-323 |
Cow position: | chr5:73887692-73887935 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 172 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 30, 78 |
Conread position: | 76-330 |
Cow position: | chr5:42099782-42100027 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 186 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 68, 87 |
Conread position: | 76-334 |
Cow position: | chr5:13421221-13420969 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 184 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 65, 74 |
Conread position: | 76-334 |
Cow position: | chr5:47358072-47357823 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 188 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 184, 87 |
Conread position: | 76-334 |
Cow position: | chr5:60969506-60969253 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 190 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 175, 69 |
Conread position: | 76-339 |
Cow position: | chr5:21043187-21042920 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 124 |
Conread position: | 76-342 |
Cow position: | chr5:70705279-70705018 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 194 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 65, 113 |
Conread position: | 76-379 |
Cow position: | chr5:19914794-19914496 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 38 |
Conread position: | 76-381 |
Cow position: | chr5:23628729-23628424 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 44 |
Conread position: | 76-392 |
Cow position: | chr5:29536797-29537125 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 266 |
Conread position: | 76-392 |
Cow position: | chr5:47771617-47771930 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 234 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 41, 24 |
Conread position: | 76-395 |
Cow position: | chr5:66106922-66106599 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 287 |
Conread position: | 77-333 |
Cow position: | chr5:70720485-70720736 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 190 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 118, 71 |
Conread position: | 80-334 |
Cow position: | chr5:64039157-64038905 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 180 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 62, 84 |
Conread position: | 80-363 |
Cow position: | chr5:30204820-30204546 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 83 |
Conread position: | 80-363 |
Cow position: | chr5:63515616-63515892 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 209 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 61, 72 |
Conread position: | 84-392 |
Cow position: | chr5:48275002-48275312 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 224 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 60, 84 |
Conread position: | 85-335 |
Cow position: | chr5:73480070-73480319 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 178 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 57, 15 |
Conread position: | 85-347 |
Cow position: | chr5:37372342-37372070 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 85-395 |
Cow position: | chr5:72939388-72939700 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 224 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 59, 22 |
Conread position: | 86-324 |
Cow position: | chr5:29076234-29075991 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 91-395 |
Cow position: | chr5:2441014-2441318 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 239 |
Conread position: | 91-395 |
Cow position: | chr5:47839717-47840025 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 225 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 27, 100 |
Conread position: | 93-383 |
Cow position: | chr5:64796430-64796141 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 58 |
Conread position: | 100-389 |
Cow position: | chr5:42785361-42785653 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 183 |
Conread position: | 102-335 |
Cow position: | chr5:49920562-49920328 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 176 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 44, 72 |
Conread position: | 109-283 |
Cow position: | chr5:27996113-27995936 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 129 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 33, 84 |
Conread position: | 119-342 |
Cow position: | chr5:67962622-67962403 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 163 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 24, 44 |
Conread position: | 122-323 |
Cow position: | chr5:9368866-9368672 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 154 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 19, 30 |
Conread position: | 122-335 |
Cow position: | chr5:53638299-53638087 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 151 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 20, 40 |
Conread position: | 172-334 |
Cow position: | chr5:74780371-74780208 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 118 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 222-382 |
Cow position: | chr5:18710026-18709868 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 129 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 35, 127 |
Conread position: | 234-335 |
Cow position: | chr5:58439412-58439310 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.