Cow genome map
| Conread name: | rcbl0_006057.y1 |
| Conread position: | 53-335 |
| Cow position: | chr6:11177030-11177308 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 87, 159 |
| Conread position: | 65-289 |
| Cow position: | chr6:56909784-56910012 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 65-334 |
| Cow position: | chr6:61436403-61436137 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 5, 124 |
| Conread position: | 65-335 |
| Cow position: | chr6:5984507-5984233 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 65-335 |
| Cow position: | chr6:50266129-50265857 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 76, 164 |
| Conread position: | 65-395 |
| Cow position: | chr6:44496359-44496034 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 104 |
| Conread position: | 66-336 |
| Cow position: | chr6:26242602-26242330 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 225 |
| Conread position: | 70-318 |
| Cow position: | chr6:98114-97873 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 129, 5 |
| Conread position: | 75-342 |
| Cow position: | chr6:26451442-26451176 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 69, 151 |
| Conread position: | 75-342 |
| Cow position: | chr6:60795120-60794851 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 187 |
| Conread position: | 75-399 |
| Cow position: | chr6:16604377-16604698 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 19 |
| Conread position: | 76-323 |
| Cow position: | chr6:45339957-45339720 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 76-330 |
| Cow position: | chr6:50481619-50481868 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 66, 94 |
| Conread position: | 76-330 |
| Cow position: | chr6:53233874-53233624 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 67, 88 |
| Conread position: | 76-334 |
| Cow position: | chr6:27413518-27413275 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 76-334 |
| Cow position: | chr6:48151699-48151447 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 60, 88 |
| Conread position: | 76-334 |
| Cow position: | chr6:50742988-50743243 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 77 |
| Conread position: | 76-336 |
| Cow position: | chr6:61844666-61844917 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 253, 74 |
| Conread position: | 76-372 |
| Cow position: | chr6:44231338-44231049 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 119, 68 |
| Conread position: | 76-395 |
| Cow position: | chr6:37884529-37884854 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 77-334 |
| Cow position: | chr6:14883559-14883309 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 78-334 |
| Cow position: | chr6:67782054-67782311 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 8 |
| Conread position: | 78-335 |
| Cow position: | chr6:54338130-54337873 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 96 |
| Conread position: | 78-343 |
| Cow position: | chr6:7497113-7496851 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 65, 74 |
| Conread position: | 78-381 |
| Cow position: | chr6:49801241-49801547 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 253 |
| Conread position: | 78-392 |
| Cow position: | chr6:47225918-47226234 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 132 |
| Conread position: | 80-285 |
| Cow position: | chr6:42803997-42804203 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 64, 69 |
| Conread position: | 80-385 |
| Cow position: | chr6:62860330-62860026 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 69 |
| Conread position: | 80-390 |
| Cow position: | chr6:38939574-38939885 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 80-392 |
| Cow position: | chr6:24803922-24803609 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 81-334 |
| Cow position: | chr6:15068962-15068714 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 83-330 |
| Cow position: | chr6:37390445-37390204 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 59, 41 |
| Conread position: | 83-334 |
| Cow position: | chr6:26454438-26454189 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 82 |
| Conread position: | 84-335 |
| Cow position: | chr6:47228986-47228734 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 97-312 |
| Cow position: | chr6:23900068-23899851 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 108-330 |
| Cow position: | chr6:1632242-1632456 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 152, 39 |
| Conread position: | 110-334 |
| Cow position: | chr6:61542793-61542575 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 119-334 |
| Cow position: | chr6:28433959-28433751 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 123-323 |
| Cow position: | chr6:60065135-60064943 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 27 |
| Conread position: | 159-323 |
| Cow position: | chr6:59297962-59297800 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 101, 13 |
Show alignments to all cow chromosomes.