Cow genome map
| Conread name: | rcbl0_006057.y1 |
| Conread position: | 61-312 |
| Cow position: | chr9:22440930-22441175 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 39 |
| Conread position: | 63-342 |
| Cow position: | chr9:15993445-15993162 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 79, 189 |
| Conread position: | 65-304 |
| Cow position: | chr9:33569354-33569600 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 78, 56 |
| Conread position: | 65-312 |
| Cow position: | chr9:28536059-28536306 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 65-334 |
| Cow position: | chr9:34402410-34402673 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 76, 86 |
| Conread position: | 65-335 |
| Cow position: | chr9:3435908-3436176 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 80, 217 |
| Conread position: | 65-336 |
| Cow position: | chr9:8627178-8627451 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 65-342 |
| Cow position: | chr9:36712883-36712603 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 219 |
| Conread position: | 65-379 |
| Cow position: | chr9:44114478-44114784 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 77, 146 |
| Conread position: | 65-390 |
| Cow position: | chr9:8321053-8321371 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 87, 43 |
| Conread position: | 65-395 |
| Cow position: | chr9:16863581-16863910 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 94 |
| Conread position: | 66-395 |
| Cow position: | chr9:27385901-27385569 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 238 |
| Conread position: | 67-282 |
| Cow position: | chr9:54462227-54462448 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 67-342 |
| Cow position: | chr9:1383259-1383533 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 155 |
| Conread position: | 70-300 |
| Cow position: | chr9:7448040-7448275 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 75, 5 |
| Conread position: | 74-342 |
| Cow position: | chr9:42252822-42252548 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 176 |
| Conread position: | 75-341 |
| Cow position: | chr9:37289948-37289674 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 75-342 |
| Cow position: | chr9:58569330-58569593 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 68, 16 |
| Conread position: | 75-392 |
| Cow position: | chr9:5479663-5479334 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 37 |
| Conread position: | 76-317 |
| Cow position: | chr9:49421122-49420885 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 181, 91 |
| Conread position: | 76-330 |
| Cow position: | chr9:25031940-25032187 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 68, 74 |
| Conread position: | 76-334 |
| Cow position: | chr9:4968268-4968519 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 69, 88 |
| Conread position: | 76-334 |
| Cow position: | chr9:5701377-5701637 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 95, 82 |
| Conread position: | 76-334 |
| Cow position: | chr9:20605310-20605556 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 184, 71 |
| Conread position: | 76-342 |
| Cow position: | chr9:41027108-41026838 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 68, 261 |
| Conread position: | 76-363 |
| Cow position: | chr9:1630974-1631256 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 27, 76 |
| Conread position: | 76-363 |
| Cow position: | chr9:12638371-12638099 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 67, 147 |
| Conread position: | 76-392 |
| Cow position: | chr9:6260536-6260213 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 150 |
| Conread position: | 76-395 |
| Cow position: | chr9:5381157-5380848 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 122, 48 |
| Conread position: | 78-315 |
| Cow position: | chr9:1097731-1097501 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 73 |
| Conread position: | 78-396 |
| Cow position: | chr9:1387977-1387660 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 105 |
| Conread position: | 81-323 |
| Cow position: | chr9:8596660-8596425 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 84-363 |
| Cow position: | chr9:25541643-25541373 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 68, 60 |
| Conread position: | 86-394 |
| Cow position: | chr9:16618955-16619257 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 139 |
| Conread position: | 92-335 |
| Cow position: | chr9:34047937-34047689 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 93-296 |
| Cow position: | chr9:22726522-22726318 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 93-342 |
| Cow position: | chr9:7616059-7615810 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 225 |
| Conread position: | 102-309 |
| Cow position: | chr9:7009037-7008826 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 103-390 |
| Cow position: | chr9:40440742-40441027 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 142-335 |
| Cow position: | chr9:30200004-30200196 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 81 |
| Conread position: | 151-345 |
| Cow position: | chr9:61574512-61574319 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 48, 79 |
| Conread position: | 165-395 |
| Cow position: | chr9:23133430-23133655 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 34, 59 |
| Conread position: | 191-380 |
| Cow position: | chr9:48193777-48193588 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 198-392 |
| Cow position: | chr9:8083147-8082954 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 50 |
Show alignments to all cow chromosomes.