Cow genome map
| Conread name: | rcbl0_006057.y1 |
| Conread position: | 35-335 |
| Cow position: | chrX:39528729-39528431 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 107, 267 |
| Conread position: | 62-311 |
| Cow position: | chrX:29919598-29919852 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 65-289 |
| Cow position: | chrX:29149513-29149743 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 6, 11 |
| Conread position: | 65-312 |
| Cow position: | chrX:42570424-42570665 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 65-315 |
| Cow position: | chrX:26463893-26463640 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 76, 235 |
| Conread position: | 65-335 |
| Cow position: | chrX:19503629-19503362 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 65-335 |
| Cow position: | chrX:32978655-32978930 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 65-335 |
| Cow position: | chrX:34827524-34827258 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 76, 41 |
| Conread position: | 65-335 |
| Cow position: | chrX:37074774-37075039 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 160 |
| Conread position: | 65-392 |
| Cow position: | chrX:36090697-36090361 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 67-335 |
| Cow position: | chrX:25306494-25306762 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 75, 159 |
| Conread position: | 70-289 |
| Cow position: | chrX:9514892-9515117 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 75, 5 |
| Conread position: | 71-389 |
| Cow position: | chrX:48264906-48265225 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 111 |
| Conread position: | 74-293 |
| Cow position: | chrX:30035767-30035993 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 75-293 |
| Cow position: | chrX:40598823-40598598 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 50, 40 |
| Conread position: | 75-312 |
| Cow position: | chrX:12649345-12649104 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 76-290 |
| Cow position: | chrX:28641873-28641668 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 95, 68 |
| Conread position: | 76-321 |
| Cow position: | chrX:39983888-39983649 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 76-323 |
| Cow position: | chrX:42417118-42416878 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 76-323 |
| Cow position: | chrX:48401219-48401465 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 69, 108 |
| Conread position: | 76-324 |
| Cow position: | chrX:39861262-39861018 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 67, 148 |
| Conread position: | 76-324 |
| Cow position: | chrX:45893229-45892980 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 105 |
| Conread position: | 76-330 |
| Cow position: | chrX:5414733-5414483 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 92 |
| Conread position: | 76-330 |
| Cow position: | chrX:31204141-31203893 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 184, 68 |
| Conread position: | 76-332 |
| Cow position: | chrX:26381324-26381569 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 66, 75 |
| Conread position: | 76-334 |
| Cow position: | chrX:42497102-42496851 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 68, 88 |
| Conread position: | 76-335 |
| Cow position: | chrX:24394727-24394479 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 65, 76 |
| Conread position: | 76-357 |
| Cow position: | chrX:47336063-47336346 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 109 |
| Conread position: | 76-363 |
| Cow position: | chrX:45769473-45769760 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 78-383 |
| Cow position: | chrX:48015841-48016145 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 66, 104 |
| Conread position: | 79-391 |
| Cow position: | chrX:47331475-47331787 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 103 |
| Conread position: | 81-289 |
| Cow position: | chrX:26411903-26411689 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 85-335 |
| Cow position: | chrX:44117040-44117292 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 57, 89 |
| Conread position: | 94-334 |
| Cow position: | chrX:28037053-28036823 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 119-304 |
| Cow position: | chrX:42467254-42467441 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 26, 118 |
| Conread position: | 127-334 |
| Cow position: | chrX:15267121-15267333 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 176-335 |
| Cow position: | chrX:6393019-6393175 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 204-330 |
| Cow position: | chrX:28042295-28042420 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 47, 80 |
Show alignments to all cow chromosomes.