Cow genome map

Conread name: rcbl0_007566.y1

Conread position: 1-461
Cow position: chr17:10529009-10528548 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 54

Conread position: 5-231
Cow position: chr17:14265818-14265595 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 42

Conread position: 5-257
Cow position: chr17:5224139-5224384 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 77, 50

Conread position: 5-332
Cow position: chr17:242375-242693 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 25

Conread position: 5-444
Cow position: chr17:9117379-9117812 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 50

Conread position: 5-447
Cow position: chr17:24973686-24974117 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 46

Conread position: 5-452
Cow position: chr17:40331505-40331940 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 50

Conread position: 5-456
Cow position: chr17:30529800-30529369 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 44

Conread position: 5-462
Cow position: chr17:2810351-2810818 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 151

Conread position: 5-462
Cow position: chr17:42419475-42419893 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 308
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 44, 0

Conread position: 7-221
Cow position: chr17:5740304-5740503 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 7-253
Cow position: chr17:23337276-23337036 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 48

Conread position: 7-254
Cow position: chr17:31231-31479 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 48

Conread position: 7-254
Cow position: chr17:14051364-14051116 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 48

Conread position: 7-274
Cow position: chr17:3843230-3843484 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 165, 28

Conread position: 7-274
Cow position: chr17:22032945-22032686 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 133, 48

Conread position: 7-280
Cow position: chr17:34316979-34316696 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 37, 207

Conread position: 7-281
Cow position: chr17:4606710-4606968 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 30

Conread position: 7-281
Cow position: chr17:25168051-25168326 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 133, 48

Conread position: 7-285
Cow position: chr17:27305901-27306173 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 133, 42

Conread position: 7-293
Cow position: chr17:33271935-33271660 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 26

Conread position: 7-331
Cow position: chr17:11296376-11296703 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 71, 25

Conread position: 7-331
Cow position: chr17:26182960-26183282 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 48

Conread position: 7-347
Cow position: chr17:8690714-8690371 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 50, 122

Conread position: 7-385
Cow position: chr17:17121414-17121779 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 50

Conread position: 7-395
Cow position: chr17:11035660-11036030 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 70, 21

Conread position: 7-422
Cow position: chr17:40421407-40421815 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 275
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 174, 48

Conread position: 7-427
Cow position: chr17:21495115-21495521 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 48

Conread position: 7-427
Cow position: chr17:36331228-36330809 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 48

Conread position: 7-432
Cow position: chr17:979396-979012 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 288
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 247, 35

Conread position: 7-436
Cow position: chr17:41029690-41030096 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 42

Conread position: 7-447
Cow position: chr17:12289681-12289240 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 209

Conread position: 7-447
Cow position: chr17:20093386-20092957 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 300
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 74, 48

Conread position: 7-447
Cow position: chr17:24077144-24077572 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 7-447
Cow position: chr17:24883827-24883404 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 302
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 37, 49

Conread position: 7-447
Cow position: chr17:40771566-40772000 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 198

Conread position: 7-452
Cow position: chr17:26230677-26231130 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 43

Conread position: 7-461
Cow position: chr17:6155779-6156216 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 48

Conread position: 7-462
Cow position: chr17:15664407-15664859 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 48

Conread position: 7-462
Cow position: chr17:17222082-17222527 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 48

Conread position: 8-315
Cow position: chr17:32651359-32651662 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 11

Conread position: 8-439
Cow position: chr17:25189022-25189448 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 296
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 158, 27

Conread position: 8-446
Cow position: chr17:1493417-1492979 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 47

Conread position: 10-447
Cow position: chr17:13244286-13243880 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 290
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 40

Conread position: 11-447
Cow position: chr17:32027720-32027281 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 44

Conread position: 13-287
Cow position: chr17:4601799-4601530 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 132, 42

Conread position: 13-298
Cow position: chr17:10649593-10649868 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 69, 29

Conread position: 13-338
Cow position: chr17:1783862-1783543 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 127, 42

Conread position: 13-395
Cow position: chr17:37163785-37163413 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 251

Conread position: 13-405
Cow position: chr17:3503322-3503709 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 143

Conread position: 13-447
Cow position: chr17:18720700-18720276 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 14

Conread position: 13-451
Cow position: chr17:5900132-5900544 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 290
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 241, 27

Conread position: 13-462
Cow position: chr17:14026171-14025724 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 42

Conread position: 13-462
Cow position: chr17:18109342-18108903 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 40

Conread position: 14-239
Cow position: chr17:40312473-40312693 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 131, 21

Conread position: 14-254
Cow position: chr17:43717563-43717333 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 14-287
Cow position: chr17:9079444-9079186 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 30

Conread position: 14-444
Cow position: chr17:40289255-40288833 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 21

Conread position: 14-452
Cow position: chr17:32138652-32138249 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 66, 21

Conread position: 15-243
Cow position: chr17:3387043-3387258 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 67, 20

Conread position: 15-254
Cow position: chr17:6566222-6566447 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 15-254
Cow position: chr17:29292620-29292385 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 15

Conread position: 15-263
Cow position: chr17:27667448-27667199 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 63, 33

Conread position: 15-283
Cow position: chr17:1295825-1295557 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 34

Conread position: 15-284
Cow position: chr17:20233973-20234242 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 27

Conread position: 15-285
Cow position: chr17:11056633-11056356 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 195

Conread position: 15-286
Cow position: chr17:1653942-1653674 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 40

Conread position: 15-289
Cow position: chr17:30539503-30539236 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 211
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 62, 40

Conread position: 15-302
Cow position: chr17:19266660-19266379 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 70

Conread position: 15-306
Cow position: chr17:21874570-21874268 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 34

Conread position: 15-327
Cow position: chr17:27679498-27679187 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 34

Conread position: 15-331
Cow position: chr17:12059350-12059038 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 58

Conread position: 15-340
Cow position: chr17:3471161-3471482 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 135

Conread position: 15-340
Cow position: chr17:13922224-13922544 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 25

Conread position: 15-385
Cow position: chr17:18490282-18490648 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 62, 15

Conread position: 15-394
Cow position: chr17:10473581-10473964 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 259
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 138, 40

Conread position: 15-405
Cow position: chr17:33934000-33933615 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 271
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 43, 138

Conread position: 15-425
Cow position: chr17:16446683-16446289 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 67, 40

Conread position: 15-427
Cow position: chr17:11216134-11215745 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 15-431
Cow position: chr17:20848280-20848676 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 20

Conread position: 15-435
Cow position: chr17:35388268-35387844 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 277
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 65

Conread position: 15-437
Cow position: chr17:43141974-43141548 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 280
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 132

Conread position: 15-439
Cow position: chr17:21293299-21292885 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 36

Conread position: 15-442
Cow position: chr17:20889121-20889535 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 43

Conread position: 15-444
Cow position: chr17:21115199-21114786 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 20

Conread position: 15-446
Cow position: chr17:12929797-12929361 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 294
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 75, 40

Conread position: 15-446
Cow position: chr17:25900945-25901370 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 40

Conread position: 15-447
Cow position: chr17:14003575-14003992 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 40

Conread position: 15-447
Cow position: chr17:14033901-14033471 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 40

Conread position: 15-447
Cow position: chr17:18860972-18860565 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 27

Conread position: 15-447
Cow position: chr17:20993294-20992872 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 40

Conread position: 15-447
Cow position: chr17:21335952-21335522 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 40

Conread position: 15-447
Cow position: chr17:23101461-23101048 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 295
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 67, 20

Conread position: 15-447
Cow position: chr17:32989239-32989649 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 36

Conread position: 15-447
Cow position: chr17:32993867-32993451 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 36

Conread position: 15-448
Cow position: chr17:8544054-8544477 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 30

Conread position: 15-449
Cow position: chr17:20022771-20022342 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 15-452
Cow position: chr17:1410500-1410065 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 66

Conread position: 15-453
Cow position: chr17:25796594-25796160 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 297
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 70, 40

Conread position: 15-457
Cow position: chr17:27795394-27795833 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 32

Conread position: 15-461
Cow position: chr17:11278276-11277844 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 40

Conread position: 15-461
Cow position: chr17:11381969-11381543 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 307
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 62, 37

Conread position: 15-461
Cow position: chr17:23063460-23063904 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 20

Conread position: 15-462
Cow position: chr17:4612330-4611877 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 296
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 67, 20

Conread position: 15-462
Cow position: chr17:11618326-11618770 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 40

Conread position: 15-462
Cow position: chr17:18201523-18201944 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 301
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 64, 20

Conread position: 15-462
Cow position: chr17:21973385-21972944 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 40

Conread position: 15-462
Cow position: chr17:34079352-34078925 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 40

Conread position: 16-274
Cow position: chr17:20126368-20126617 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 139, 33

Conread position: 16-285
Cow position: chr17:24549917-24550191 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 66

Conread position: 16-331
Cow position: chr17:13143935-13143634 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 62, 28

Conread position: 16-439
Cow position: chr17:21959932-21959525 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 33

Conread position: 16-444
Cow position: chr17:17059187-17059591 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 290
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 417, 42

Conread position: 16-454
Cow position: chr17:38832789-38833219 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 39

Conread position: 17-254
Cow position: chr17:3498916-3498682 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 65, 38

Conread position: 17-274
Cow position: chr17:21363156-21363410 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 38

Conread position: 17-332
Cow position: chr17:42347473-42347169 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 38

Conread position: 17-461
Cow position: chr17:5730672-5731100 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 295
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 112, 38

Conread position: 17-462
Cow position: chr17:13940574-13940135 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 277
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 41

Conread position: 17-462
Cow position: chr17:20800564-20800999 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 38

Conread position: 18-247
Cow position: chr17:43527730-43527952 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 18-423
Cow position: chr17:21004082-21003684 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 37

Conread position: 20-447
Cow position: chr17:16371001-16371428 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 183

Conread position: 20-462
Cow position: chr17:20033164-20032725 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 303
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 65, 13

Conread position: 21-332
Cow position: chr17:21031540-21031842 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 30

Conread position: 22-393
Cow position: chr17:28539788-28540144 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 60, 20

Conread position: 22-440
Cow position: chr17:18495754-18495356 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 287
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 234, 27

Conread position: 23-235
Cow position: chr17:16117675-16117460 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 176
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 59, 32

Conread position: 23-343
Cow position: chr17:20780264-20780575 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 54

Conread position: 24-251
Cow position: chr17:24876893-24877121 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 31

Conread position: 24-254
Cow position: chr17:27142509-27142741 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 180

Conread position: 24-286
Cow position: chr17:11102039-11101784 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 58, 31

Conread position: 25-288
Cow position: chr17:17060929-17060661 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 165

Conread position: 26-280
Cow position: chr17:20839800-20839550 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 228, 9

Conread position: 26-283
Cow position: chr17:12216322-12216060 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 178

Conread position: 27-461
Cow position: chr17:38614714-38615145 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 28

Conread position: 32-280
Cow position: chr17:4824262-4824507 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 119, 46

Conread position: 33-271
Cow position: chr17:31481278-31481035 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 125, 22

Conread position: 33-293
Cow position: chr17:4721251-4721514 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 44, 16

Conread position: 33-439
Cow position: chr17:30718655-30718255 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 273
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 49, 16

Conread position: 34-447
Cow position: chr17:30665039-30665440 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 21

Conread position: 34-462
Cow position: chr17:5898759-5898341 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 293
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 136, 21

Conread position: 36-440
Cow position: chr17:32419352-32418952 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 13

Conread position: 37-293
Cow position: chr17:27162417-27162672 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 5, 191

Conread position: 41-449
Cow position: chr17:39771168-39771570 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 266
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 44, 14

Conread position: 42-344
Cow position: chr17:15333939-15333643 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 214, 124

Conread position: 42-405
Cow position: chr17:6423532-6423892 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 102

Conread position: 42-427
Cow position: chr17:5423300-5422919 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 70

Conread position: 42-432
Cow position: chr17:7132684-7132276 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 162

Conread position: 42-433
Cow position: chr17:9746292-9746668 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 267
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 213, 40

Conread position: 42-446
Cow position: chr17:15103117-15102728 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 277
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 40, 162

Conread position: 42-447
Cow position: chr17:15684276-15684679 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 275
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 130

Conread position: 42-452
Cow position: chr17:17410069-17410469 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 67

Conread position: 45-331
Cow position: chr17:5246674-5246948 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 211, 17

Conread position: 49-340
Cow position: chr17:41290239-41289959 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 82, 94

Conread position: 49-456
Cow position: chr17:29472253-29472644 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 272
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 112

Conread position: 50-245
Cow position: chr17:3258276-3258468 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 0

Conread position: 50-452
Cow position: chr17:22563966-22564360 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 22

Conread position: 51-254
Cow position: chr17:32554243-32554043 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 89, 31

Conread position: 51-290
Cow position: chr17:5745463-5745233 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 26, 99

Conread position: 51-332
Cow position: chr17:18884567-18884275 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 75, 32

Conread position: 51-343
Cow position: chr17:9778031-9778309 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 31, 83

Conread position: 51-454
Cow position: chr17:24587398-24587802 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 159

Conread position: 52-449
Cow position: chr17:2662190-2662592 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 277
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 113

Conread position: 53-257
Cow position: chr17:29040684-29040481 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 156

Conread position: 53-274
Cow position: chr17:20835375-20835598 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 24, 144

Conread position: 53-321
Cow position: chr17:20870311-20870054 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 94, 29

Conread position: 53-452
Cow position: chr17:21739102-21738702 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 235

Conread position: 53-462
Cow position: chr17:32279125-32278721 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 54-254
Cow position: chr17:33052646-33052841 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 98

Conread position: 54-258
Cow position: chr17:21710288-21710490 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 27, 137

Conread position: 54-288
Cow position: chr17:8837158-8836930 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 202, 24

Conread position: 54-435
Cow position: chr17:11156710-11156336 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 248
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 150

Conread position: 55-390
Cow position: chr17:21628267-21628591 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 9

Conread position: 57-289
Cow position: chr17:21323086-21323298 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 147, 19

Conread position: 57-340
Cow position: chr17:23245998-23246271 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 46

Conread position: 57-436
Cow position: chr17:24580513-24580135 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 260
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 77, 146

Conread position: 57-446
Cow position: chr17:20157403-20157777 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 193, 27

Conread position: 57-462
Cow position: chr17:25097249-25097636 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 88

Conread position: 58-332
Cow position: chr17:34208032-34207760 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 27, 5

Conread position: 59-433
Cow position: chr17:11832348-11831959 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 81, 25

Conread position: 62-254
Cow position: chr17:966948-966757 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 138

Conread position: 62-288
Cow position: chr17:22781483-22781709 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 15

Conread position: 62-331
Cow position: chr17:27765072-27765327 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 84

Conread position: 62-408
Cow position: chr17:38646859-38647192 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 21

Conread position: 62-458
Cow position: chr17:21755650-21755256 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 269
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 250

Conread position: 62-461
Cow position: chr17:10446707-10447095 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 267
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 15, 160

Conread position: 64-331
Cow position: chr17:6624051-6624310 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 18, 136

Conread position: 65-462
Cow position: chr17:1035810-1035411 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 212

Conread position: 70-446
Cow position: chr17:32273883-32273519 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 248
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 7, 23

Conread position: 76-462
Cow position: chr17:12108609-12108991 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 125

Conread position: 78-251
Cow position: chr17:21412439-21412267 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 63, 129

Conread position: 78-257
Cow position: chr17:3518444-3518269 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 97, 70

Conread position: 78-274
Cow position: chr17:21697540-21697741 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 125

Conread position: 78-286
Cow position: chr17:32950080-32950291 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 23

Conread position: 78-300
Cow position: chr17:4436423-4436203 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 175, 104

Conread position: 78-331
Cow position: chr17:40892957-40893205 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 105, 74

Conread position: 78-425
Cow position: chr17:37480185-37479854 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 226
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 78-426
Cow position: chr17:41892260-41891913 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 233
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 129

Conread position: 78-444
Cow position: chr17:37482271-37481904 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 67, 129

Conread position: 78-447
Cow position: chr17:1256696-1256330 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 146

Conread position: 78-447
Cow position: chr17:37857926-37857522 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 265
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 390

Conread position: 78-461
Cow position: chr17:21434921-21434546 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 261
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 63, 129

Conread position: 79-444
Cow position: chr17:25999925-26000284 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 123

Conread position: 79-447
Cow position: chr17:24773492-24773850 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 248
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 79, 121

Conread position: 80-427
Cow position: chr17:12536658-12536315 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 176, 119

Conread position: 80-461
Cow position: chr17:24490331-24490726 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 81-423
Cow position: chr17:10459124-10458786 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 173, 15

Conread position: 85-445
Cow position: chr17:25611908-25612259 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 245
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 177, 78

Conread position: 86-449
Cow position: chr17:20932144-20932501 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 114

Conread position: 90-440
Cow position: chr17:36203670-36203322 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 79

Conread position: 92-414
Cow position: chr17:21599860-21599546 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 211
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 23

Conread position: 93-461
Cow position: chr17:24149000-24149369 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 184

Conread position: 95-268
Cow position: chr17:36268221-36268386 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 95-432
Cow position: chr17:12590988-12591329 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 50, 108

Conread position: 97-447
Cow position: chr17:12946537-12946185 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 12

Conread position: 100-435
Cow position: chr17:20990364-20990031 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 163, 99

Conread position: 102-395
Cow position: chr17:21918042-21917755 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 50, 0

Conread position: 104-254
Cow position: chr17:20928748-20928896 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 11

Conread position: 104-260
Cow position: chr17:17683064-17682915 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 104-351
Cow position: chr17:10510828-10510582 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 99

Conread position: 105-395
Cow position: chr17:34650278-34650578 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 195
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 35, 13

Conread position: 106-403
Cow position: chr17:5398600-5398315 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 58, 151

Conread position: 106-447
Cow position: chr17:4106150-4105825 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 150, 93

Conread position: 106-447
Cow position: chr17:4121886-4121560 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 150, 93

Conread position: 108-274
Cow position: chr17:21298062-21298236 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 108-388
Cow position: chr17:7142702-7142972 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 96, 0

Conread position: 108-442
Cow position: chr17:1562936-1562620 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 61

Conread position: 108-451
Cow position: chr17:27058715-27058385 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 144, 74

Conread position: 109-331
Cow position: chr17:1353235-1353451 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 95, 53

Conread position: 110-452
Cow position: chr17:26631976-26631636 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 227
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 93

Conread position: 111-370
Cow position: chr17:27549987-27549735 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 140

Conread position: 111-449
Cow position: chr17:28467977-28468296 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 326, 88

Conread position: 114-274
Cow position: chr17:40792067-40792224 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 142, 85

Conread position: 114-462
Cow position: chr17:18146026-18146373 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 227
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 53, 86

Conread position: 116-406
Cow position: chr17:4967956-4968241 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 189
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 87

Conread position: 116-440
Cow position: chr17:31037534-31037213 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 216
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 145, 83

Conread position: 118-284
Cow position: chr17:267736-267572 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 76, 31

Conread position: 118-461
Cow position: chr17:31701285-31701616 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 144

Conread position: 123-447
Cow position: chr17:6328961-6329286 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 80

Conread position: 129-461
Cow position: chr17:24928338-24928660 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 119, 36

Conread position: 134-423
Cow position: chr17:11962685-11962389 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 120, 65

Conread position: 135-457
Cow position: chr17:40673252-40673551 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 298, 7

Conread position: 135-461
Cow position: chr17:26233960-26233645 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 291, 7

Conread position: 135-462
Cow position: chr17:32280535-32280851 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 230, 7

Conread position: 137-332
Cow position: chr17:11921415-11921219 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 62

Conread position: 139-440
Cow position: chr17:31856533-31856833 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 9

Conread position: 139-457
Cow position: chr17:7803301-7802994 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 7

Conread position: 140-425
Cow position: chr17:1113755-1114036 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 118

Conread position: 141-462
Cow position: chr17:27184069-27183758 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 114, 19

Conread position: 143-462
Cow position: chr17:9966155-9965839 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 208
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 207, 56

Conread position: 145-447
Cow position: chr17:20884398-20884694 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 111, 54

Conread position: 145-447
Cow position: chr17:32348949-32349237 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 145-461
Cow position: chr17:33411147-33410825 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 221
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 108, 128

Conread position: 149-427
Cow position: chr17:39857272-39857535 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 153-452
Cow position: chr17:20874273-20874571 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 136

Conread position: 154-425
Cow position: chr17:37699472-37699202 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 104

Conread position: 155-411
Cow position: chr17:23563904-23563661 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 186, 24

Conread position: 155-421
Cow position: chr17:25501995-25502254 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 101, 44

Conread position: 155-457
Cow position: chr17:24559178-24559471 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 272, 44

Conread position: 163-290
Cow position: chr17:20305941-20306068 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 34

Conread position: 164-452
Cow position: chr17:11215335-11215053 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 92, 40

Conread position: 165-406
Cow position: chr17:7136877-7137108 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 165-423
Cow position: chr17:1040641-1040890 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 90, 34

Conread position: 169-447
Cow position: chr17:14652881-14652608 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 97, 32

Conread position: 175-445
Cow position: chr17:23517037-23516772 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 24

Conread position: 175-452
Cow position: chr17:27203139-27202872 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 24

Conread position: 179-446
Cow position: chr17:21489715-21489456 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 77, 20

Conread position: 181-457
Cow position: chr17:25342829-25342562 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 182-405
Cow position: chr17:23798191-23798409 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 17

Conread position: 193-446
Cow position: chr17:5350198-5349954 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 49

Conread position: 193-449
Cow position: chr17:22057102-22056855 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 240, 58

Conread position: 193-455
Cow position: chr17:4683266-4683524 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 82

Conread position: 193-462
Cow position: chr17:29025987-29026258 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 11, 60

Conread position: 196-440
Cow position: chr17:1469300-1469539 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 27

Conread position: 199-460
Cow position: chr17:27730466-27730727 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 74

Conread position: 200-462
Cow position: chr17:36814287-36814548 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 73

Conread position: 203-452
Cow position: chr17:3153641-3153401 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 74

Conread position: 204-447
Cow position: chr17:40638881-40639114 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 70

Conread position: 253-446
Cow position: chr17:25584222-25584411 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 180, 25

Show alignments to all cow chromosomes.