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Cow genome map

           
Conread name:
           
rcbl0_007566.y1
        

               
Conread position:
               
1-273
               

               
Cow position:
               
chr18:56168258-56167989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 50
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr18:13293168-13293442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:11618141-11618415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
134, 50
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr18:20174471-20174036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr18:12241934-12242382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr18:3180079-3180519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr18:12270152-12270603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
84, 216
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr18:22092443-22092740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr18:27388221-27388461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr18:20864650-20864925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
5-451
               

               
Cow position:
               
chr18:51756761-51757194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 50
               

               
Conread position:
               
7-252
               

               
Cow position:
               
chr18:13172860-13172610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 198
               

               
Conread position:
               
7-260
               

               
Cow position:
               
chr18:8105278-8105032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr18:26286578-26286858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
128, 42
               

               
Conread position:
               
7-331
               

               
Cow position:
               
chr18:13632286-13631972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
7-331
               

               
Cow position:
               
chr18:18562873-18562556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
7-331
               

               
Cow position:
               
chr18:35636682-35636366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
7-385
               

               
Cow position:
               
chr18:28768032-28768400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
198, 48
               

               
Conread position:
               
7-406
               

               
Cow position:
               
chr18:40758881-40759262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 48
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr18:23766757-23766350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
7-416
               

               
Cow position:
               
chr18:36512640-36513045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
7-423
               

               
Cow position:
               
chr18:47183620-47183221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
7-427
               

               
Cow position:
               
chr18:4666543-4666141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
158, 37
               

               
Conread position:
               
7-433
               

               
Cow position:
               
chr18:56172355-56171932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
7-439
               

               
Cow position:
               
chr18:47511659-47512095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr18:4749216-4748788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr18:9007814-9008219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
7-446
               

               
Cow position:
               
chr18:19193680-19193269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
246, 28
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr18:5190014-5189581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 48
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr18:39002130-39001706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr18:43284086-43283645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 30
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr18:35058010-35058293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
8-461
               

               
Cow position:
               
chr18:51826957-51827387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
8-462
               

               
Cow position:
               
chr18:22121214-22120773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr18:238676-238435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
11-462
               

               
Cow position:
               
chr18:7955817-7956260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
12-447
               

               
Cow position:
               
chr18:9089375-9089794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
237, 43
               

               
Conread position:
               
13-232
               

               
Cow position:
               
chr18:46881012-46880789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
13-236
               

               
Cow position:
               
chr18:45395664-45395896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 168
               

               
Conread position:
               
13-274
               

               
Cow position:
               
chr18:5457584-5457337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
249, 22
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr18:4315970-4316254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 199
               

               
Conread position:
               
13-341
               

               
Cow position:
               
chr18:47314627-47314290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 187
               

               
Conread position:
               
13-410
               

               
Cow position:
               
chr18:4182516-4182129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
13-445
               

               
Cow position:
               
chr18:29356967-29356533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 198
               

               
Conread position:
               
13-446
               

               
Cow position:
               
chr18:11779336-11779744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
13-452
               

               
Cow position:
               
chr18:10656118-10656542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 11
               

               
Conread position:
               
13-461
               

               
Cow position:
               
chr18:52637863-52637419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 246
               

               
Conread position:
               
13-461
               

               
Cow position:
               
chr18:55552636-55553081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
14-302
               

               
Cow position:
               
chr18:3209393-3209673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
14-332
               

               
Cow position:
               
chr18:7947047-7947371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
14-340
               

               
Cow position:
               
chr18:32121389-32121078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
193, 25
               

               
Conread position:
               
14-427
               

               
Cow position:
               
chr18:36458606-36459007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
14-461
               

               
Cow position:
               
chr18:4926746-4927178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
14-461
               

               
Cow position:
               
chr18:9029290-9029721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr18:7930470-7930241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
15-246
               

               
Cow position:
               
chr18:21721607-21721377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
15-254
               

               
Cow position:
               
chr18:9818513-9818746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
15-255
               

               
Cow position:
               
chr18:49665484-49665249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
41, 138
               

               
Conread position:
               
15-268
               

               
Cow position:
               
chr18:6290457-6290708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
15-285
               

               
Cow position:
               
chr18:16418020-16417762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
15-287
               

               
Cow position:
               
chr18:42966511-42966807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
15-288
               

               
Cow position:
               
chr18:9010405-9010666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
241, 40
               

               
Conread position:
               
15-288
               

               
Cow position:
               
chr18:41270760-41271032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
15-289
               

               
Cow position:
               
chr18:20998941-20998676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
15-289
               

               
Cow position:
               
chr18:33606303-33606577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
15-297
               

               
Cow position:
               
chr18:11831811-11832076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
15-301
               

               
Cow position:
               
chr18:29387900-29388177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
235, 40
               

               
Conread position:
               
15-316
               

               
Cow position:
               
chr18:45104773-45104476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
15-387
               

               
Cow position:
               
chr18:15881181-15880808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
15-391
               

               
Cow position:
               
chr18:46108705-46108348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
15-405
               

               
Cow position:
               
chr18:13508053-13507686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 20
               

               
Conread position:
               
15-429
               

               
Cow position:
               
chr18:7950786-7951193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
15-431
               

               
Cow position:
               
chr18:45570697-45571092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
15-440
               

               
Cow position:
               
chr18:11322262-11322686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
15-446
               

               
Cow position:
               
chr18:7359410-7359841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
15-446
               

               
Cow position:
               
chr18:52635408-52634975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 40
               

               
Conread position:
               
15-447
               

               
Cow position:
               
chr18:11867026-11867438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 25
               

               
Conread position:
               
15-447
               

               
Cow position:
               
chr18:29058819-29058404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
150, 20
               

               
Conread position:
               
15-447
               

               
Cow position:
               
chr18:44262292-44262723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 170
               

               
Conread position:
               
15-447
               

               
Cow position:
               
chr18:51406222-51405814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
15-450
               

               
Cow position:
               
chr18:38606909-38607320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
15-453
               

               
Cow position:
               
chr18:55782753-55782329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
15-454
               

               
Cow position:
               
chr18:9365585-9366027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
15-455
               

               
Cow position:
               
chr18:28658239-28657808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
15-457
               

               
Cow position:
               
chr18:7964904-7965336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
15-462
               

               
Cow position:
               
chr18:39662450-39662890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 116
               

               
Conread position:
               
16-441
               

               
Cow position:
               
chr18:1585430-1585025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
16-447
               

               
Cow position:
               
chr18:28101300-28101730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
16-453
               

               
Cow position:
               
chr18:37002305-37002735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
17-273
               

               
Cow position:
               
chr18:24342300-24342548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
17-285
               

               
Cow position:
               
chr18:33793379-33793644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
40, 135
               

               
Conread position:
               
17-290
               

               
Cow position:
               
chr18:16842391-16842116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
17-315
               

               
Cow position:
               
chr18:52382372-52382668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
17-423
               

               
Cow position:
               
chr18:45904217-45903825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 42
               

               
Conread position:
               
17-445
               

               
Cow position:
               
chr18:37023881-37023455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
17-451
               

               
Cow position:
               
chr18:19273424-19272995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
17-456
               

               
Cow position:
               
chr18:7965942-7966348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
18-286
               

               
Cow position:
               
chr18:36445108-36445380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
18-332
               

               
Cow position:
               
chr18:12118169-12117867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr18:19850068-19849698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 30
               

               
Conread position:
               
18-423
               

               
Cow position:
               
chr18:50637784-50637401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
18-446
               

               
Cow position:
               
chr18:51691792-51691367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
18-462
               

               
Cow position:
               
chr18:16227235-16227670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
66, 186
               

               
Conread position:
               
18-462
               

               
Cow position:
               
chr18:29371543-29371979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
19-449
               

               
Cow position:
               
chr18:20641808-20641401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
21-302
               

               
Cow position:
               
chr18:49161777-49161489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
21-344
               

               
Cow position:
               
chr18:44549225-44548919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
21-439
               

               
Cow position:
               
chr18:56159134-56159550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
21-440
               

               
Cow position:
               
chr18:14586797-14586380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
21-440
               

               
Cow position:
               
chr18:55505083-55505491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
21-447
               

               
Cow position:
               
chr18:6275495-6275907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
21-456
               

               
Cow position:
               
chr18:31672824-31672407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
23-274
               

               
Cow position:
               
chr18:3098631-3098387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
159, 32
               

               
Conread position:
               
23-450
               

               
Cow position:
               
chr18:17004931-17005362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
24-296
               

               
Cow position:
               
chr18:3133060-3132804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
24-447
               

               
Cow position:
               
chr18:23447401-23446965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr18:1733507-1733302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
178, 29
               

               
Conread position:
               
27-431
               

               
Cow position:
               
chr18:11377052-11377444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
29-279
               

               
Cow position:
               
chr18:45572791-45573043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 6
               

               
Conread position:
               
30-265
               

               
Cow position:
               
chr18:4624741-4624509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
174, 25
               

               
Conread position:
               
30-452
               

               
Cow position:
               
chr18:54572610-54572189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
30-461
               

               
Cow position:
               
chr18:4625589-4625999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 8
               

               
Conread position:
               
32-447
               

               
Cow position:
               
chr18:43823263-43822859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
33-340
               

               
Cow position:
               
chr18:24022075-24022377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
169, 16
               

               
Conread position:
               
33-423
               

               
Cow position:
               
chr18:20125994-20126377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
34-241
               

               
Cow position:
               
chr18:716083-716286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
36-288
               

               
Cow position:
               
chr18:10516838-10517076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
36-385
               

               
Cow position:
               
chr18:14127274-14126933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
36-447
               

               
Cow position:
               
chr18:1144502-1144089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 65
               

               
Conread position:
               
40-439
               

               
Cow position:
               
chr18:16044456-16044060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
41-444
               

               
Cow position:
               
chr18:39875561-39875166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
42-274
               

               
Cow position:
               
chr18:13359759-13359995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 68
               

               
Conread position:
               
42-332
               

               
Cow position:
               
chr18:11166677-11166962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
40, 162
               

               
Conread position:
               
42-444
               

               
Cow position:
               
chr18:46048459-46048846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
42-447
               

               
Cow position:
               
chr18:3115156-3115550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 216
               

               
Conread position:
               
43-432
               

               
Cow position:
               
chr18:55789293-55788915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 125
               

               
Conread position:
               
44-332
               

               
Cow position:
               
chr18:4858209-4857912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 160
               

               
Conread position:
               
44-462
               

               
Cow position:
               
chr18:26998564-26998998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 260
               

               
Conread position:
               
45-274
               

               
Cow position:
               
chr18:23808172-23807942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
46-451
               

               
Cow position:
               
chr18:22214188-22214591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
47-284
               

               
Cow position:
               
chr18:268108-267876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
49-284
               

               
Cow position:
               
chr18:9557686-9557919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
49-288
               

               
Cow position:
               
chr18:6610153-6609914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
49-420
               

               
Cow position:
               
chr18:39115439-39115049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
49-426
               

               
Cow position:
               
chr18:12113662-12113290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
49-435
               

               
Cow position:
               
chr18:56183643-56184020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 154
               

               
Conread position:
               
49-444
               

               
Cow position:
               
chr18:18919248-18918866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
49-445
               

               
Cow position:
               
chr18:42455315-42454927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
50-446
               

               
Cow position:
               
chr18:21266214-21266602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
51-243
               

               
Cow position:
               
chr18:4649028-4648844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
51-253
               

               
Cow position:
               
chr18:47868162-47868367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
26, 153
               

               
Conread position:
               
51-254
               

               
Cow position:
               
chr18:4529227-4529418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
51-257
               

               
Cow position:
               
chr18:5646957-5647158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
51-274
               

               
Cow position:
               
chr18:30341456-30341243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
51-278
               

               
Cow position:
               
chr18:47931153-47930929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
51-329
               

               
Cow position:
               
chr18:11680427-11680702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 153
               

               
Conread position:
               
51-341
               

               
Cow position:
               
chr18:52632698-52632417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 155
               

               
Conread position:
               
51-452
               

               
Cow position:
               
chr18:25647542-25647149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
197, 101
               

               
Conread position:
               
51-452
               

               
Cow position:
               
chr18:42747303-42747687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 67
               

               
Conread position:
               
52-279
               

               
Cow position:
               
chr18:47517500-47517281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
52-462
               

               
Cow position:
               
chr18:20271312-20270902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
54-288
               

               
Cow position:
               
chr18:16847408-16847637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
54-430
               

               
Cow position:
               
chr18:38985397-38985778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
28, 150
               

               
Conread position:
               
54-434
               

               
Cow position:
               
chr18:31586654-31586293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
56-457
               

               
Cow position:
               
chr18:21192698-21192308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
57-375
               

               
Cow position:
               
chr18:33407324-33407641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 147
               

               
Conread position:
               
57-422
               

               
Cow position:
               
chr18:43806164-43806522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
28, 146
               

               
Conread position:
               
57-443
               

               
Cow position:
               
chr18:25282842-25282462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
57-456
               

               
Cow position:
               
chr18:55498779-55499177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
147, 25
               

               
Conread position:
               
62-245
               

               
Cow position:
               
chr18:18976802-18976988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 175
               

               
Conread position:
               
62-316
               

               
Cow position:
               
chr18:5247801-5247546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 188
               

               
Conread position:
               
62-427
               

               
Cow position:
               
chr18:51656335-51655966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 230
               

               
Conread position:
               
62-438
               

               
Cow position:
               
chr18:47525124-47525495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
62-445
               

               
Cow position:
               
chr18:28924114-28923754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
63-415
               

               
Cow position:
               
chr18:33523950-33524299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
65-462
               

               
Cow position:
               
chr18:11691689-11691297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
70-447
               

               
Cow position:
               
chr18:2592447-2592071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
74-410
               

               
Cow position:
               
chr18:29796694-29796369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 83
               

               
Conread position:
               
74-441
               

               
Cow position:
               
chr18:10322532-10322896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
78-274
               

               
Cow position:
               
chr18:21768362-21768562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
67, 98
               

               
Conread position:
               
78-285
               

               
Cow position:
               
chr18:2480377-2480596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr18:5711932-5711578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
170, 80
               

               
Conread position:
               
78-429
               

               
Cow position:
               
chr18:7952381-7952716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
78-461
               

               
Cow position:
               
chr18:35452677-35453037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
355, 64
               

               
Conread position:
               
79-284
               

               
Cow position:
               
chr18:48453429-48453629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
83-332
               

               
Cow position:
               
chr18:35582362-35582116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
84, 117
               

               
Conread position:
               
83-432
               

               
Cow position:
               
chr18:12023893-12023557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
196, 76
               

               
Conread position:
               
83-447
               

               
Cow position:
               
chr18:37382358-37381991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
83-460
               

               
Cow position:
               
chr18:17649997-17649632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
84-306
               

               
Cow position:
               
chr18:56192849-56192630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
90-254
               

               
Cow position:
               
chr18:21773236-21773405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
91-285
               

               
Cow position:
               
chr18:28823220-28823025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
163, 13
               

               
Conread position:
               
92-447
               

               
Cow position:
               
chr18:4496139-4495789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
341, 113
               

               
Conread position:
               
93-288
               

               
Cow position:
               
chr18:21205116-21205306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
157, 58
               

               
Conread position:
               
95-444
               

               
Cow position:
               
chr18:33007808-33008158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 108
               

               
Conread position:
               
95-445
               

               
Cow position:
               
chr18:32883053-32883396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 109
               

               
Conread position:
               
99-447
               

               
Cow position:
               
chr18:18592228-18592568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
100-296
               

               
Cow position:
               
chr18:12809616-12809811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
154, 67
               

               
Conread position:
               
101-331
               

               
Cow position:
               
chr18:24946055-24945825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 102
               

               
Conread position:
               
101-447
               

               
Cow position:
               
chr18:42432330-42431992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
152, 31
               

               
Conread position:
               
104-316
               

               
Cow position:
               
chr18:55397066-55397275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
104-445
               

               
Cow position:
               
chr18:48713314-48713642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
149, 40
               

               
Conread position:
               
106-263
               

               
Cow position:
               
chr18:35908386-35908543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
147, 29
               

               
Conread position:
               
106-386
               

               
Cow position:
               
chr18:4628795-4629077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
167, 145
               

               
Conread position:
               
107-446
               

               
Cow position:
               
chr18:42479828-42479489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
46, 96
               

               
Conread position:
               
108-276
               

               
Cow position:
               
chr18:25984808-25984637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 94
               

               
Conread position:
               
109-339
               

               
Cow position:
               
chr18:15340674-15340456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 48
               

               
Conread position:
               
109-443
               

               
Cow position:
               
chr18:48829021-48828686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
110-446
               

               
Cow position:
               
chr18:33896656-33896324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
146, 59
               

               
Conread position:
               
111-334
               

               
Cow position:
               
chr18:1582515-1582287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 126
               

               
Conread position:
               
114-285
               

               
Cow position:
               
chr18:55716077-55715906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
147, 136
               

               
Conread position:
               
116-408
               

               
Cow position:
               
chr18:36184127-36183849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
120-235
               

               
Cow position:
               
chr18:2619420-2619303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
120-331
               

               
Cow position:
               
chr18:14085238-14085444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
136, 79
               

               
Conread position:
               
120-434
               

               
Cow position:
               
chr18:2864222-2863906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
87, 173
               

               
Conread position:
               
122-270
               

               
Cow position:
               
chr18:18815894-18815746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
122-457
               

               
Cow position:
               
chr18:39434602-39434927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
124-288
               

               
Cow position:
               
chr18:29188790-29188959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
134-441
               

               
Cow position:
               
chr18:7415239-7414938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
135-370
               

               
Cow position:
               
chr18:32430788-32430569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
135-446
               

               
Cow position:
               
chr18:39623590-39623899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
121, 83
               

               
Conread position:
               
135-452
               

               
Cow position:
               
chr18:1954797-1954491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
135-452
               

               
Cow position:
               
chr18:51392849-51392541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
135-461
               

               
Cow position:
               
chr18:179234-178929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
298, 7
               

               
Conread position:
               
135-462
               

               
Cow position:
               
chr18:3211665-3211989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 7
               

               
Conread position:
               
135-462
               

               
Cow position:
               
chr18:16545669-16545353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
298, 7
               

               
Conread position:
               
137-454
               

               
Cow position:
               
chr18:48451847-48452171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
67, 6
               

               
Conread position:
               
140-369
               

               
Cow position:
               
chr18:6103298-6103079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
116, 24
               

               
Conread position:
               
140-428
               

               
Cow position:
               
chr18:18369566-18369285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
114, 59
               

               
Conread position:
               
140-431
               

               
Cow position:
               
chr18:7108922-7109208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
141-461
               

               
Cow position:
               
chr18:3387325-3387004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 84
               

               
Conread position:
               
142-440
               

               
Cow position:
               
chr18:55806833-55806544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
148-395
               

               
Cow position:
               
chr18:52704048-52703802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
142, 69
               

               
Conread position:
               
148-454
               

               
Cow position:
               
chr18:27109492-27109185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
149-447
               

               
Cow position:
               
chr18:19896650-19896358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
110, 50
               

               
Conread position:
               
149-462
               

               
Cow position:
               
chr18:50974491-50974176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
152-446
               

               
Cow position:
               
chr18:858618-858920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
153-388
               

               
Cow position:
               
chr18:47812279-47812506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
154-441
               

               
Cow position:
               
chr18:36746444-36746168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
273, 66
               

               
Conread position:
               
154-457
               

               
Cow position:
               
chr18:46276498-46276195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
155-451
               

               
Cow position:
               
chr18:16686525-16686236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 44
               

               
Conread position:
               
163-461
               

               
Cow position:
               
chr18:346682-346387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
90, 63
               

               
Conread position:
               
165-440
               

               
Cow position:
               
chr18:43555703-43555436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
166-340
               

               
Cow position:
               
chr18:10861615-10861440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
166-462
               

               
Cow position:
               
chr18:55747508-55747797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
88, 8
               

               
Conread position:
               
169-395
               

               
Cow position:
               
chr18:4330780-4331005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
86, 100
               

               
Conread position:
               
172-447
               

               
Cow position:
               
chr18:12273481-12273755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
176-386
               

               
Cow position:
               
chr18:43950656-43950861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
182-443
               

               
Cow position:
               
chr18:51850721-51850473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
182-447
               

               
Cow position:
               
chr18:4556330-4556073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 67
               

               
Conread position:
               
182-456
               

               
Cow position:
               
chr18:35873913-35874184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
69, 109
               

               
Conread position:
               
182-462
               

               
Cow position:
               
chr18:24266574-24266294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 87
               

               
Conread position:
               
185-447
               

               
Cow position:
               
chr18:51643528-51643269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
187-433
               

               
Cow position:
               
chr18:52854893-52855137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
187-447
               

               
Cow position:
               
chr18:30225701-30225433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
188-461
               

               
Cow position:
               
chr18:19687864-19688136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
188-461
               

               
Cow position:
               
chr18:35663738-35664002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
245, 29
               

               
Conread position:
               
193-423
               

               
Cow position:
               
chr18:380779-381004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
193-446
               

               
Cow position:
               
chr18:16997099-16997350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
193-447
               

               
Cow position:
               
chr18:5632112-5632365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
196-457
               

               
Cow position:
               
chr18:47835676-47835931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
229-446
               

               
Cow position:
               
chr18:19883412-19883629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 50
               
Show alignments to all cow chromosomes.