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Cow genome map

           
Conread name:
           
rcbl0_007566.y1
        

               
Conread position:
               
1-253
               

               
Cow position:
               
chr20:41119657-41119894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr20:32636830-32636563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr20:6423699-6423993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr20:33435428-33434987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
109, 34
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr20:12441953-12441666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
5-456
               

               
Cow position:
               
chr20:19328140-19328570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 15
               

               
Conread position:
               
7-260
               

               
Cow position:
               
chr20:12048148-12048382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
7-280
               

               
Cow position:
               
chr20:13269365-13269636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 42
               

               
Conread position:
               
7-284
               

               
Cow position:
               
chr20:12334122-12334391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
7-299
               

               
Cow position:
               
chr20:10235592-10235881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr20:3781691-3781374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
7-332
               

               
Cow position:
               
chr20:19146610-19146934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
7-340
               

               
Cow position:
               
chr20:6258323-6257996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
7-370
               

               
Cow position:
               
chr20:10884626-10884262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr20:31740472-31740103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr20:22313420-22313038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr20:27641876-27642265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
7-409
               

               
Cow position:
               
chr20:35797346-35797743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
7-427
               

               
Cow position:
               
chr20:9433342-9433739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
7-441
               

               
Cow position:
               
chr20:14806625-14807051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr20:23871075-23870649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
7-447
               

               
Cow position:
               
chr20:28982442-28982874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
7-447
               

               
Cow position:
               
chr20:29844785-29845225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 178
               

               
Conread position:
               
7-451
               

               
Cow position:
               
chr20:39418152-39417726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
7-452
               

               
Cow position:
               
chr20:12996269-12995827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr20:2819303-2819733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
264, 14
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr20:6240789-6240335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 48
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr20:8429488-8429928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 34
               

               
Conread position:
               
8-280
               

               
Cow position:
               
chr20:22445895-22445626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 188
               

               
Conread position:
               
8-353
               

               
Cow position:
               
chr20:38817757-38818087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 27
               

               
Conread position:
               
8-423
               

               
Cow position:
               
chr20:40423349-40422955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
8-462
               

               
Cow position:
               
chr20:17251452-17251904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 47
               

               
Conread position:
               
13-275
               

               
Cow position:
               
chr20:5104688-5104433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
240, 36
               

               
Conread position:
               
13-284
               

               
Cow position:
               
chr20:17903905-17904176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
13-439
               

               
Cow position:
               
chr20:19363616-19363198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
13-444
               

               
Cow position:
               
chr20:42469513-42469929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
420, 25
               

               
Conread position:
               
13-461
               

               
Cow position:
               
chr20:24398886-24398459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
14-447
               

               
Cow position:
               
chr20:398546-398136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
15-254
               

               
Cow position:
               
chr20:15582287-15582054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
15-272
               

               
Cow position:
               
chr20:6501547-6501809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
15-280
               

               
Cow position:
               
chr20:18185327-18185580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
15-281
               

               
Cow position:
               
chr20:23679399-23679134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 41
               

               
Conread position:
               
15-288
               

               
Cow position:
               
chr20:19313317-19313042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
15-308
               

               
Cow position:
               
chr20:19410617-19410328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
118, 31
               

               
Conread position:
               
15-331
               

               
Cow position:
               
chr20:9473866-9473556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
15-332
               

               
Cow position:
               
chr20:3034845-3035163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
15-416
               

               
Cow position:
               
chr20:5958156-5957762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
15-425
               

               
Cow position:
               
chr20:33144805-33144403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
15-432
               

               
Cow position:
               
chr20:18321046-18320637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
15-446
               

               
Cow position:
               
chr20:39415501-39415922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
15-447
               

               
Cow position:
               
chr20:9536885-9537305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
15-447
               

               
Cow position:
               
chr20:19236838-19237247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
240, 40
               

               
Conread position:
               
15-447
               

               
Cow position:
               
chr20:23065089-23064662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 191
               

               
Conread position:
               
15-452
               

               
Cow position:
               
chr20:36779982-36779554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
152, 40
               

               
Conread position:
               
15-461
               

               
Cow position:
               
chr20:7806814-7806382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
15-461
               

               
Cow position:
               
chr20:9014600-9014160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
15-461
               

               
Cow position:
               
chr20:20353166-20352726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
15-462
               

               
Cow position:
               
chr20:4945497-4945065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
16-286
               

               
Cow position:
               
chr20:7659460-7659200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
238, 39
               

               
Conread position:
               
16-381
               

               
Cow position:
               
chr20:35958398-35958754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 39
               

               
Conread position:
               
16-444
               

               
Cow position:
               
chr20:39398229-39398651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 160
               

               
Conread position:
               
16-451
               

               
Cow position:
               
chr20:581179-580745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 189
               

               
Conread position:
               
16-454
               

               
Cow position:
               
chr20:25009891-25009452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
16-462
               

               
Cow position:
               
chr20:40177001-40177429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
145, 33
               

               
Conread position:
               
17-340
               

               
Cow position:
               
chr20:13967509-13967191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
17-434
               

               
Cow position:
               
chr20:13751996-13752384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 27
               

               
Conread position:
               
18-451
               

               
Cow position:
               
chr20:4621590-4621176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 135
               

               
Conread position:
               
21-280
               

               
Cow position:
               
chr20:5077950-5078211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
178, 34
               

               
Conread position:
               
21-442
               

               
Cow position:
               
chr20:20202970-20203387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
21-447
               

               
Cow position:
               
chr20:21714506-21714939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
22-384
               

               
Cow position:
               
chr20:34001641-34001280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
23-462
               

               
Cow position:
               
chr20:40127580-40127156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
25-344
               

               
Cow position:
               
chr20:30817289-30817607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
26, 135
               

               
Conread position:
               
26-453
               

               
Cow position:
               
chr20:39517772-39518185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
27-254
               

               
Cow position:
               
chr20:17734013-17733791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
27-254
               

               
Cow position:
               
chr20:20312977-20312763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
27-289
               

               
Cow position:
               
chr20:17584175-17584437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
28-462
               

               
Cow position:
               
chr20:10200102-10200534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
29-461
               

               
Cow position:
               
chr20:32512745-32513189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
29-461
               

               
Cow position:
               
chr20:41028250-41028676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
29-462
               

               
Cow position:
               
chr20:6054750-6054321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 26
               

               
Conread position:
               
31-427
               

               
Cow position:
               
chr20:36207570-36207966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
109, 6
               

               
Conread position:
               
32-288
               

               
Cow position:
               
chr20:40256734-40256990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
33-427
               

               
Cow position:
               
chr20:40781740-40782113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
35-297
               

               
Cow position:
               
chr20:41703922-41704194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
35-461
               

               
Cow position:
               
chr20:11341037-11340619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
36-288
               

               
Cow position:
               
chr20:24391756-24391997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
36-446
               

               
Cow position:
               
chr20:8556504-8556099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
36-460
               

               
Cow position:
               
chr20:35177004-35176591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
42-422
               

               
Cow position:
               
chr20:40185900-40185527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
213, 40
               

               
Conread position:
               
42-426
               

               
Cow position:
               
chr20:14759891-14759514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
42-427
               

               
Cow position:
               
chr20:34597335-34596946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 130
               

               
Conread position:
               
42-446
               

               
Cow position:
               
chr20:5826710-5827112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
40, 162
               

               
Conread position:
               
43-288
               

               
Cow position:
               
chr20:14572580-14572343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
43-387
               

               
Cow position:
               
chr20:4205737-4206084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
39, 162
               

               
Conread position:
               
44-254
               

               
Cow position:
               
chr20:11741528-11741317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
101, 160
               

               
Conread position:
               
45-286
               

               
Cow position:
               
chr20:11923463-11923225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
45-340
               

               
Cow position:
               
chr20:22704064-22704360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
34, 159
               

               
Conread position:
               
47-427
               

               
Cow position:
               
chr20:41627566-41627189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
48-457
               

               
Cow position:
               
chr20:38578977-38578587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
49-332
               

               
Cow position:
               
chr20:23936634-23936347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
49-434
               

               
Cow position:
               
chr20:40511977-40511597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
122, 154
               

               
Conread position:
               
49-462
               

               
Cow position:
               
chr20:13829047-13829448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
50-224
               

               
Cow position:
               
chr20:12783978-12784149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 161
               

               
Conread position:
               
50-449
               

               
Cow position:
               
chr20:38873230-38872827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
51-253
               

               
Cow position:
               
chr20:5025520-5025322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 119
               

               
Conread position:
               
51-276
               

               
Cow position:
               
chr20:22007286-22007507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
51-283
               

               
Cow position:
               
chr20:14735459-14735690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 148
               

               
Conread position:
               
51-426
               

               
Cow position:
               
chr20:42459069-42458705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
51-440
               

               
Cow position:
               
chr20:38768671-38768299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
51-446
               

               
Cow position:
               
chr20:34776968-34777350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
51-461
               

               
Cow position:
               
chr20:18551145-18551549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
51-462
               

               
Cow position:
               
chr20:7442342-7441954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
52-254
               

               
Cow position:
               
chr20:35907262-35907068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
52-288
               

               
Cow position:
               
chr20:26679907-26680146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
53-225
               

               
Cow position:
               
chr20:13023694-13023520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
53-280
               

               
Cow position:
               
chr20:15235548-15235781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
54-236
               

               
Cow position:
               
chr20:24902687-24902497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 158
               

               
Conread position:
               
55-316
               

               
Cow position:
               
chr20:6848408-6848672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
57-316
               

               
Cow position:
               
chr20:26469275-26469021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
113, 19
               

               
Conread position:
               
57-427
               

               
Cow position:
               
chr20:11482351-11481983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
25, 147
               

               
Conread position:
               
57-427
               

               
Cow position:
               
chr20:28296078-28296447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
57-447
               

               
Cow position:
               
chr20:14879574-14879962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
25, 146
               

               
Conread position:
               
59-288
               

               
Cow position:
               
chr20:8020685-8020919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 144
               

               
Conread position:
               
59-443
               

               
Cow position:
               
chr20:34251888-34251503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
59-453
               

               
Cow position:
               
chr20:20983797-20984169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
62-284
               

               
Cow position:
               
chr20:9379202-9379426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
62-297
               

               
Cow position:
               
chr20:33176975-33177216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
62-447
               

               
Cow position:
               
chr20:38551167-38551537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
63-257
               

               
Cow position:
               
chr20:32069063-32068867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 141
               

               
Conread position:
               
63-447
               

               
Cow position:
               
chr20:28067631-28067255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 136
               

               
Conread position:
               
64-254
               

               
Cow position:
               
chr20:38486753-38486564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 119
               

               
Conread position:
               
64-457
               

               
Cow position:
               
chr20:39325180-39325574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 154
               

               
Conread position:
               
66-455
               

               
Cow position:
               
chr20:15566034-15565652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
14, 147
               

               
Conread position:
               
69-406
               

               
Cow position:
               
chr20:24000978-24000665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
187, 61
               

               
Conread position:
               
78-251
               

               
Cow position:
               
chr20:11043686-11043522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
78-289
               

               
Cow position:
               
chr20:13994619-13994833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 125
               

               
Conread position:
               
78-423
               

               
Cow position:
               
chr20:11542473-11542139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
78-440
               

               
Cow position:
               
chr20:6602851-6603206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
178, 71
               

               
Conread position:
               
78-447
               

               
Cow position:
               
chr20:20967150-20967494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
355, 49
               

               
Conread position:
               
78-447
               

               
Cow position:
               
chr20:23846862-23846489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
78-447
               

               
Cow position:
               
chr20:34098148-34097780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 121
               

               
Conread position:
               
80-332
               

               
Cow position:
               
chr20:11864324-11864076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
73, 215
               

               
Conread position:
               
83-235
               

               
Cow position:
               
chr20:37165541-37165690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
84-447
               

               
Cow position:
               
chr20:35741569-35741941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 78
               

               
Conread position:
               
84-454
               

               
Cow position:
               
chr20:14980698-14980326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 6
               

               
Conread position:
               
85-457
               

               
Cow position:
               
chr20:11045495-11045854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
86-252
               

               
Cow position:
               
chr20:35760489-35760651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
86-288
               

               
Cow position:
               
chr20:37200171-37200380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
89-273
               

               
Cow position:
               
chr20:3569240-3569061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
90-247
               

               
Cow position:
               
chr20:27408056-27407898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
90-332
               

               
Cow position:
               
chr20:37272538-37272772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
91-332
               

               
Cow position:
               
chr20:283105-282868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
95-433
               

               
Cow position:
               
chr20:7439022-7438693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
158, 30
               

               
Conread position:
               
100-340
               

               
Cow position:
               
chr20:28831795-28832036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
100-395
               

               
Cow position:
               
chr20:3740168-3739884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
100-424
               

               
Cow position:
               
chr20:7210867-7211183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
100-453
               

               
Cow position:
               
chr20:3321306-3320965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
156, 65
               

               
Conread position:
               
100-457
               

               
Cow position:
               
chr20:21928736-21929087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
156, 99
               

               
Conread position:
               
101-450
               

               
Cow position:
               
chr20:14100605-14100257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
101-462
               

               
Cow position:
               
chr20:5814401-5814754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
7, 104
               

               
Conread position:
               
102-287
               

               
Cow position:
               
chr20:9988421-9988600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
119, 102
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr20:41403405-41403597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
104-433
               

               
Cow position:
               
chr20:13652521-13652209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
104-436
               

               
Cow position:
               
chr20:31323634-31323946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
105-344
               

               
Cow position:
               
chr20:15312496-15312737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
105-461
               

               
Cow position:
               
chr20:271586-271236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
124, 65
               

               
Conread position:
               
108-316
               

               
Cow position:
               
chr20:9701735-9701527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
144, 19
               

               
Conread position:
               
109-452
               

               
Cow position:
               
chr20:34221314-34221655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
111-344
               

               
Cow position:
               
chr20:10348593-10348818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
141, 40
               

               
Conread position:
               
111-427
               

               
Cow position:
               
chr20:13025765-13025458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
233, 23
               

               
Conread position:
               
114-419
               

               
Cow position:
               
chr20:21761622-21761919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
218, 135
               

               
Conread position:
               
114-427
               

               
Cow position:
               
chr20:5636326-5636633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
116-462
               

               
Cow position:
               
chr20:14433580-14433235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
150, 83
               

               
Conread position:
               
118-446
               

               
Cow position:
               
chr20:36010639-36010967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
22, 160
               

               
Conread position:
               
121-440
               

               
Cow position:
               
chr20:4334667-4334363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
289, 39
               

               
Conread position:
               
122-241
               

               
Cow position:
               
chr20:9729939-9730056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
124-440
               

               
Cow position:
               
chr20:14917156-14917451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 126
               

               
Conread position:
               
133-461
               

               
Cow position:
               
chr20:4892957-4892636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
118, 139
               

               
Conread position:
               
134-427
               

               
Cow position:
               
chr20:4332004-4332286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
134-427
               

               
Cow position:
               
chr20:22484726-22485011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
120, 141
               

               
Conread position:
               
134-447
               

               
Cow position:
               
chr20:40446195-40446503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
135-246
               

               
Cow position:
               
chr20:30710778-30710669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
135-345
               

               
Cow position:
               
chr20:39247781-39247983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
118, 7
               

               
Conread position:
               
135-393
               

               
Cow position:
               
chr20:8098148-8098404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 139
               

               
Conread position:
               
135-462
               

               
Cow position:
               
chr20:38847367-38847042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
136-461
               

               
Cow position:
               
chr20:32523333-32523647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
136-462
               

               
Cow position:
               
chr20:32583178-32583506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
139-452
               

               
Cow position:
               
chr20:20099723-20099423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
140-445
               

               
Cow position:
               
chr20:15569074-15568778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
116, 59
               

               
Conread position:
               
141-460
               

               
Cow position:
               
chr20:32674337-32674636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
206, 79
               

               
Conread position:
               
142-447
               

               
Cow position:
               
chr20:25162254-25161954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
143-340
               

               
Cow position:
               
chr20:27003854-27003659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
143-450
               

               
Cow position:
               
chr20:36633692-36633988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
285, 56
               

               
Conread position:
               
148-245
               

               
Cow position:
               
chr20:5633478-5633382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
149-447
               

               
Cow position:
               
chr20:7362850-7363136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
284, 50
               

               
Conread position:
               
153-457
               

               
Cow position:
               
chr20:31289383-31289687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
163-426
               

               
Cow position:
               
chr20:36040366-36040626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
163-439
               

               
Cow position:
               
chr20:19616381-19616657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 130
               

               
Conread position:
               
165-462
               

               
Cow position:
               
chr20:24711732-24712029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
169-461
               

               
Cow position:
               
chr20:15118177-15118462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 123
               

               
Conread position:
               
171-387
               

               
Cow position:
               
chr20:23103123-23103335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
171-426
               

               
Cow position:
               
chr20:7738323-7738080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
179-462
               

               
Cow position:
               
chr20:28594194-28594479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
187-395
               

               
Cow position:
               
chr20:33819136-33819342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 86
               

               
Conread position:
               
188-429
               

               
Cow position:
               
chr20:11548803-11548570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
193-457
               

               
Cow position:
               
chr20:11008093-11008353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 86
               

               
Conread position:
               
195-445
               

               
Cow position:
               
chr20:16491997-16492245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
203-447
               

               
Cow position:
               
chr20:6248663-6248428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
230, 44
               

               
Conread position:
               
206-462
               

               
Cow position:
               
chr20:354961-354713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
212-461
               

               
Cow position:
               
chr20:16818357-16818605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
235-460
               

               
Cow position:
               
chr20:7709821-7709596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
282-454
               

               
Cow position:
               
chr20:3148692-3148864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
151, 10
               
Show alignments to all cow chromosomes.