Cow genome map

Conread name: rcbl0_007566.y1

Conread position: 1-286
Cow position: chr21:28617357-28617628 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 253, 34

Conread position: 1-446
Cow position: chr21:33729188-33729623 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 48

Conread position: 1-447
Cow position: chr21:13089724-13089280 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 314
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 81, 34

Conread position: 1-461
Cow position: chr21:11706995-11706560 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 31

Conread position: 5-283
Cow position: chr21:7132703-7132432 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 135, 50

Conread position: 5-288
Cow position: chr21:5455227-5454948 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 79

Conread position: 5-457
Cow position: chr21:18568889-18568436 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 316
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 30

Conread position: 7-218
Cow position: chr21:30626422-30626211 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 133, 48

Conread position: 7-237
Cow position: chr21:26241589-26241815 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 70, 17

Conread position: 7-252
Cow position: chr21:13751149-13751389 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 29

Conread position: 7-254
Cow position: chr21:32535739-32535979 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 16

Conread position: 7-254
Cow position: chr21:34738359-34738614 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 75, 48

Conread position: 7-274
Cow position: chr21:48484679-48484420 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 197, 35

Conread position: 7-276
Cow position: chr21:34658795-34659063 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 48

Conread position: 7-283
Cow position: chr21:5636960-5636682 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 48

Conread position: 7-283
Cow position: chr21:39401361-39401629 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 48

Conread position: 7-286
Cow position: chr21:39888983-39888711 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 78, 48

Conread position: 7-288
Cow position: chr21:2495410-2495133 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 75, 23

Conread position: 7-297
Cow position: chr21:5021229-5021519 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 42

Conread position: 7-298
Cow position: chr21:42023896-42024170 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 42

Conread position: 7-299
Cow position: chr21:41957413-41957126 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 75, 37

Conread position: 7-309
Cow position: chr21:12616903-12617195 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 70, 28

Conread position: 7-316
Cow position: chr21:20925745-20925441 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 41

Conread position: 7-327
Cow position: chr21:28881910-28882210 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 75, 34

Conread position: 7-328
Cow position: chr21:40244195-40244519 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 70, 48

Conread position: 7-329
Cow position: chr21:43357500-43357181 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 71

Conread position: 7-331
Cow position: chr21:23192757-23192435 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 42

Conread position: 7-338
Cow position: chr21:5344422-5344750 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 41

Conread position: 7-340
Cow position: chr21:13897954-13898274 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 247, 42

Conread position: 7-437
Cow position: chr21:5153378-5153804 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 48

Conread position: 7-444
Cow position: chr21:29069567-29069139 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 7-445
Cow position: chr21:81831-82259 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 42

Conread position: 7-446
Cow position: chr21:13128333-13127906 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 296
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 76

Conread position: 7-446
Cow position: chr21:44252067-44251648 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 154

Conread position: 7-447
Cow position: chr21:25127371-25127798 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 22

Conread position: 7-450
Cow position: chr21:28734151-28733718 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 7-451
Cow position: chr21:26648243-26647818 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 41

Conread position: 7-454
Cow position: chr21:395639-396064 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 42

Conread position: 7-457
Cow position: chr21:2420266-2420700 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 283
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 41

Conread position: 7-457
Cow position: chr21:46912305-46912749 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 48

Conread position: 7-461
Cow position: chr21:12366148-12366578 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 48

Conread position: 8-331
Cow position: chr21:47802500-47802182 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 197

Conread position: 9-462
Cow position: chr21:33983047-33982608 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 46

Conread position: 10-286
Cow position: chr21:17434555-17434280 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 70, 27

Conread position: 10-440
Cow position: chr21:5238154-5238580 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 285
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 34

Conread position: 13-251
Cow position: chr21:7717021-7716783 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 24

Conread position: 13-289
Cow position: chr21:1464000-1464273 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 234, 42

Conread position: 13-323
Cow position: chr21:42913979-42913674 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 42

Conread position: 13-330
Cow position: chr21:35897854-35897563 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 12, 20

Conread position: 13-332
Cow position: chr21:27743508-27743827 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 30

Conread position: 13-340
Cow position: chr21:16612396-16612711 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 42

Conread position: 13-443
Cow position: chr21:34653851-34654263 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 36

Conread position: 13-447
Cow position: chr21:937819-938211 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 285
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 13-447
Cow position: chr21:4905200-4904773 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 288
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 42

Conread position: 13-457
Cow position: chr21:30231933-30231495 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 22

Conread position: 13-462
Cow position: chr21:36762820-36763268 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 314
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 64, 36

Conread position: 14-246
Cow position: chr21:13763393-13763617 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 14-254
Cow position: chr21:13703919-13703680 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 66, 26

Conread position: 14-283
Cow position: chr21:42190399-42190140 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 240, 68

Conread position: 14-284
Cow position: chr21:17714081-17714353 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 35

Conread position: 14-299
Cow position: chr21:18932260-18932536 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 245, 34

Conread position: 14-370
Cow position: chr21:24607153-24607502 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 35

Conread position: 14-395
Cow position: chr21:1483260-1483621 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 62, 17

Conread position: 14-461
Cow position: chr21:40899104-40899547 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 41

Conread position: 15-237
Cow position: chr21:31159023-31159250 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 27

Conread position: 15-251
Cow position: chr21:42348909-42348673 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 62, 40

Conread position: 15-254
Cow position: chr21:363424-363654 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 67, 40

Conread position: 15-254
Cow position: chr21:33419946-33419719 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 40

Conread position: 15-274
Cow position: chr21:18494744-18494996 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 132, 36

Conread position: 15-285
Cow position: chr21:33209968-33210240 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 18

Conread position: 15-287
Cow position: chr21:21480410-21480143 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 125, 44

Conread position: 15-288
Cow position: chr21:33997456-33997188 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 35, 136

Conread position: 15-290
Cow position: chr21:36793651-36793935 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 68, 40

Conread position: 15-300
Cow position: chr21:30990499-30990227 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 15-303
Cow position: chr21:15445310-15445018 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 67, 40

Conread position: 15-330
Cow position: chr21:43240627-43240941 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 27

Conread position: 15-332
Cow position: chr21:17475590-17475901 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 20

Conread position: 15-340
Cow position: chr21:3236301-3236612 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 239, 36

Conread position: 15-340
Cow position: chr21:10727050-10727363 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 239, 40

Conread position: 15-375
Cow position: chr21:13489412-13489767 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 244
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 40

Conread position: 15-381
Cow position: chr21:36163194-36162832 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 40

Conread position: 15-386
Cow position: chr21:7564553-7564175 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 40

Conread position: 15-387
Cow position: chr21:725121-724752 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 34

Conread position: 15-394
Cow position: chr21:27124359-27123981 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 40

Conread position: 15-404
Cow position: chr21:16188027-16187657 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 265
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 233, 39

Conread position: 15-409
Cow position: chr21:41878245-41878624 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 62, 40

Conread position: 15-422
Cow position: chr21:38900542-38900941 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 40

Conread position: 15-439
Cow position: chr21:13048427-13048007 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 40

Conread position: 15-439
Cow position: chr21:25344647-25345047 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 292
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 234, 40

Conread position: 15-439
Cow position: chr21:27230023-27229611 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 15-440
Cow position: chr21:10151564-10151992 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 40

Conread position: 15-440
Cow position: chr21:33562783-33563190 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 293
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 24, 36

Conread position: 15-442
Cow position: chr21:31691250-31691669 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 34

Conread position: 15-443
Cow position: chr21:5971067-5970648 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 286
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 144, 40

Conread position: 15-444
Cow position: chr21:5392769-5392344 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 27

Conread position: 15-444
Cow position: chr21:7582136-7581714 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 41

Conread position: 15-444
Cow position: chr21:11740363-11739933 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 303
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 62, 40

Conread position: 15-444
Cow position: chr21:46263946-46264359 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 13

Conread position: 15-445
Cow position: chr21:27863750-27863322 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 40

Conread position: 15-445
Cow position: chr21:45971389-45970982 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 40

Conread position: 15-447
Cow position: chr21:641353-641781 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 43

Conread position: 15-447
Cow position: chr21:4282094-4281686 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 295
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 67, 16

Conread position: 15-447
Cow position: chr21:42384277-42384701 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 20

Conread position: 15-449
Cow position: chr21:4080123-4080543 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 40

Conread position: 15-451
Cow position: chr21:42414330-42413896 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 137, 20

Conread position: 15-452
Cow position: chr21:34010621-34010199 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 294
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 240, 34

Conread position: 15-452
Cow position: chr21:41974610-41974181 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 40

Conread position: 15-454
Cow position: chr21:39403769-39403326 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 40

Conread position: 15-457
Cow position: chr21:19196399-19195960 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 34

Conread position: 15-457
Cow position: chr21:49700267-49699836 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 40

Conread position: 15-461
Cow position: chr21:47760546-47760977 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 40

Conread position: 15-462
Cow position: chr21:20160453-20160885 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 34

Conread position: 16-254
Cow position: chr21:17416992-17416757 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 33

Conread position: 16-254
Cow position: chr21:23683320-23683552 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 61, 39

Conread position: 16-328
Cow position: chr21:45866706-45867008 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 67, 33

Conread position: 16-332
Cow position: chr21:6764932-6764622 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 33

Conread position: 16-403
Cow position: chr21:34391200-34390826 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 41

Conread position: 16-415
Cow position: chr21:4998715-4998334 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 39

Conread position: 16-433
Cow position: chr21:28429220-28429623 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 281
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 66, 12

Conread position: 16-447
Cow position: chr21:3585586-3585175 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 32

Conread position: 17-248
Cow position: chr21:5566762-5566998 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 68, 38

Conread position: 17-445
Cow position: chr21:14760355-14760757 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 294
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 65, 32

Conread position: 17-446
Cow position: chr21:9416013-9416442 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 34

Conread position: 17-447
Cow position: chr21:36795371-36795797 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 64

Conread position: 17-448
Cow position: chr21:4399571-4400000 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 17-462
Cow position: chr21:8351530-8351088 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 301
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 60, 29

Conread position: 18-332
Cow position: chr21:4189606-4189919 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 64, 37

Conread position: 18-449
Cow position: chr21:27341822-27341399 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 304
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 64, 17

Conread position: 20-445
Cow position: chr21:5898624-5898211 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 288
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 35

Conread position: 20-461
Cow position: chr21:19407813-19407367 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 292
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 45

Conread position: 21-229
Cow position: chr21:34254507-34254300 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 34

Conread position: 21-445
Cow position: chr21:45473984-45473567 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 280
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 12, 27

Conread position: 21-447
Cow position: chr21:6833827-6834241 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 34

Conread position: 22-254
Cow position: chr21:28512309-28512533 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 14, 32

Conread position: 22-434
Cow position: chr21:28626017-28626418 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 287
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 27

Conread position: 22-445
Cow position: chr21:41597588-41598003 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 290
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 13

Conread position: 22-446
Cow position: chr21:44826100-44825697 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 27

Conread position: 23-324
Cow position: chr21:912191-911896 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 68, 28

Conread position: 24-237
Cow position: chr21:24797473-24797674 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 0

Conread position: 27-290
Cow position: chr21:33791591-33791324 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 125

Conread position: 27-422
Cow position: chr21:8126015-8125637 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 259
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 103, 28

Conread position: 29-331
Cow position: chr21:2679335-2679634 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 20

Conread position: 33-246
Cow position: chr21:13303606-13303815 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 44, 22

Conread position: 33-451
Cow position: chr21:6623928-6624354 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 284
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 93, 189

Conread position: 33-462
Cow position: chr21:23535500-23535918 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 37-447
Cow position: chr21:30849151-30848751 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 270
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 5, 72

Conread position: 37-447
Cow position: chr21:41579539-41579950 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 47

Conread position: 41-462
Cow position: chr21:41620912-41621334 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 164

Conread position: 42-301
Cow position: chr21:37361680-37361422 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 110

Conread position: 42-302
Cow position: chr21:2927409-2927148 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 106, 40

Conread position: 42-340
Cow position: chr21:12961105-12960813 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 103, 43

Conread position: 42-439
Cow position: chr21:40133949-40134343 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 277
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 49, 156

Conread position: 42-442
Cow position: chr21:23586670-23587070 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 162

Conread position: 42-444
Cow position: chr21:33515-33910 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 129

Conread position: 42-453
Cow position: chr21:29484778-29485174 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 110

Conread position: 42-454
Cow position: chr21:27521531-27521139 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 40

Conread position: 42-461
Cow position: chr21:24094950-24094555 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 279
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 88

Conread position: 43-440
Cow position: chr21:15584608-15584232 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 213, 39

Conread position: 43-447
Cow position: chr21:28923923-28924302 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 281
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 34, 8

Conread position: 43-450
Cow position: chr21:1058872-1059272 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 127

Conread position: 43-462
Cow position: chr21:6051301-6051710 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 281
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 43, 158

Conread position: 44-446
Cow position: chr21:3498294-3498686 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 270
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 106

Conread position: 45-290
Cow position: chr21:3381284-3381037 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 141, 117

Conread position: 45-427
Cow position: chr21:25382806-25383199 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 262
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 32, 75

Conread position: 46-254
Cow position: chr21:32237095-32237299 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 47, 124

Conread position: 46-382
Cow position: chr21:44515072-44515392 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 106

Conread position: 49-443
Cow position: chr21:22860803-22861189 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 204, 106

Conread position: 50-447
Cow position: chr21:3361212-3360821 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 275
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 90, 130

Conread position: 51-270
Cow position: chr21:24765087-24765313 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 60, 128

Conread position: 51-287
Cow position: chr21:48176629-48176865 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 121

Conread position: 51-288
Cow position: chr21:2785973-2785737 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 89, 12

Conread position: 51-405
Cow position: chr21:45330805-45330456 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 229

Conread position: 51-407
Cow position: chr21:18828506-18828149 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 101, 152

Conread position: 51-435
Cow position: chr21:45355639-45356013 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 154

Conread position: 51-451
Cow position: chr21:29002359-29001959 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 267
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 153

Conread position: 51-460
Cow position: chr21:18780167-18779771 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 274
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 73, 32

Conread position: 51-462
Cow position: chr21:11645166-11644760 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 116

Conread position: 51-462
Cow position: chr21:14464380-14464792 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 284
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 116

Conread position: 52-431
Cow position: chr21:21077133-21077486 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 261
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 22, 69

Conread position: 52-447
Cow position: chr21:42135820-42135424 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 152

Conread position: 53-334
Cow position: chr21:31676303-31676579 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 24, 77

Conread position: 53-446
Cow position: chr21:23568013-23568421 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 136

Conread position: 53-462
Cow position: chr21:7709970-7710370 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 255
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 95

Conread position: 54-273
Cow position: chr21:31277627-31277846 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 51

Conread position: 54-406
Cow position: chr21:1591357-1591706 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 228
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 81, 28

Conread position: 54-452
Cow position: chr21:42841785-42841400 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 208, 27

Conread position: 56-251
Cow position: chr21:40065507-40065313 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 76

Conread position: 56-340
Cow position: chr21:3813675-3813397 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 30, 194

Conread position: 57-249
Cow position: chr21:13163702-13163890 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 126, 25

Conread position: 57-274
Cow position: chr21:13850262-13850038 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 20, 60

Conread position: 57-316
Cow position: chr21:28443570-28443311 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 153

Conread position: 57-435
Cow position: chr21:10118362-10118747 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 256
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 147

Conread position: 57-445
Cow position: chr21:3763928-3763553 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 25, 14

Conread position: 57-447
Cow position: chr21:38449643-38449255 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 117

Conread position: 59-452
Cow position: chr21:47764301-47763923 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 251
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 59-462
Cow position: chr21:14452041-14452443 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 278
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 71

Conread position: 59-462
Cow position: chr21:17193949-17193542 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 221

Conread position: 62-251
Cow position: chr21:4268687-4268877 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 62-429
Cow position: chr21:40589669-40589307 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 143

Conread position: 62-447
Cow position: chr21:37706593-37706221 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 20, 81

Conread position: 63-396
Cow position: chr21:30607273-30606944 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 19, 100

Conread position: 64-274
Cow position: chr21:17174956-17175175 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 197

Conread position: 64-427
Cow position: chr21:37345286-37344928 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 220

Conread position: 65-457
Cow position: chr21:39664572-39664194 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 12, 162

Conread position: 66-386
Cow position: chr21:13488337-13488659 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 16, 106

Conread position: 66-423
Cow position: chr21:15911218-15911569 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 16, 82

Conread position: 66-461
Cow position: chr21:28027621-28028004 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 263
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 198

Conread position: 67-277
Cow position: chr21:9998901-9998687 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 78

Conread position: 67-331
Cow position: chr21:39450349-39450084 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 73, 143

Conread position: 68-273
Cow position: chr21:26829425-26829232 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 187, 62

Conread position: 70-268
Cow position: chr21:29979934-29979737 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 7, 87

Conread position: 70-285
Cow position: chr21:45375438-45375660 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 138

Conread position: 70-443
Cow position: chr21:8235722-8235374 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 186, 100

Conread position: 71-288
Cow position: chr21:18790733-18790518 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 10, 79

Conread position: 73-440
Cow position: chr21:24642344-24642697 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 70

Conread position: 76-456
Cow position: chr21:32339908-32339537 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 66

Conread position: 76-462
Cow position: chr21:21169666-21169287 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 75, 66

Conread position: 78-288
Cow position: chr21:46829437-46829235 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 78-433
Cow position: chr21:13365175-13365521 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 175, 84

Conread position: 78-433
Cow position: chr21:27146161-27145814 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 83, 122

Conread position: 78-438
Cow position: chr21:10007811-10007455 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 146

Conread position: 78-446
Cow position: chr21:22194280-22193904 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 250
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 175, 71

Conread position: 78-447
Cow position: chr21:17183753-17184111 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 172, 24

Conread position: 79-427
Cow position: chr21:10000912-10001248 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 43

Conread position: 83-254
Cow position: chr21:6765716-6765884 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 83-456
Cow position: chr21:10114493-10114133 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 251
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 152, 88

Conread position: 85-444
Cow position: chr21:712772-713134 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 169, 60

Conread position: 86-323
Cow position: chr21:45439412-45439167 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 198

Conread position: 86-439
Cow position: chr21:27624551-27624884 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 231
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 342, 22

Conread position: 87-285
Cow position: chr21:31511132-31511327 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 29

Conread position: 87-447
Cow position: chr21:28244315-28244664 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 167, 64

Conread position: 88-444
Cow position: chr21:18800688-18800343 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 243, 111

Conread position: 90-332
Cow position: chr21:5137647-5137409 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 114, 186

Conread position: 90-457
Cow position: chr21:13840165-13840529 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 76, 37

Conread position: 91-447
Cow position: chr21:45921215-45920867 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 93, 108

Conread position: 92-446
Cow position: chr21:10633796-10633448 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 164, 107

Conread position: 93-293
Cow position: chr21:10608609-10608408 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 159, 179

Conread position: 93-453
Cow position: chr21:26244777-26245110 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 95-456
Cow position: chr21:11456962-11456600 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 244
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 141, 58

Conread position: 99-448
Cow position: chr21:9301060-9301417 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 226
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 113

Conread position: 101-362
Cow position: chr21:18041989-18041738 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 155, 32

Conread position: 101-423
Cow position: chr21:47009386-47009069 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 96, 61

Conread position: 101-447
Cow position: chr21:10005032-10004692 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 66, 85

Conread position: 104-462
Cow position: chr21:42007603-42007253 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 152, 47

Conread position: 106-427
Cow position: chr21:29978903-29978587 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 6

Conread position: 107-272
Cow position: chr21:11250725-11250904 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 109-286
Cow position: chr21:11359899-11360074 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 69

Conread position: 109-447
Cow position: chr21:12462109-12461773 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 33, 91

Conread position: 110-462
Cow position: chr21:20152810-20153163 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 90, 169

Conread position: 111-452
Cow position: chr21:17875332-17874994 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 227
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 29, 92

Conread position: 116-447
Cow position: chr21:20260452-20260126 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 83

Conread position: 118-425
Cow position: chr21:34151451-34151752 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 135

Conread position: 120-452
Cow position: chr21:46911-47239 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 220
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 127, 46

Conread position: 122-280
Cow position: chr21:949794-949646 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 124-445
Cow position: chr21:30222218-30222539 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 47

Conread position: 125-391
Cow position: chr21:36789671-36789932 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 82

Conread position: 132-288
Cow position: chr21:5985433-5985275 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 132-438
Cow position: chr21:9698197-9697896 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 124, 10

Conread position: 135-340
Cow position: chr21:10561692-10561497 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 115, 25

Conread position: 135-416
Cow position: chr21:11131472-11131742 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 135-434
Cow position: chr21:25629019-25628732 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 195
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 135-460
Cow position: chr21:18155681-18155359 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 118, 7

Conread position: 135-462
Cow position: chr21:10979054-10978740 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 32, 10

Conread position: 137-462
Cow position: chr21:23980292-23979973 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 119, 62

Conread position: 141-393
Cow position: chr21:20418791-20418543 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 130, 57

Conread position: 148-446
Cow position: chr21:37790101-37789806 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 105, 37

Conread position: 150-457
Cow position: chr21:40266024-40266325 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 104, 125

Conread position: 152-446
Cow position: chr21:17008886-17009173 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 101, 65

Conread position: 155-444
Cow position: chr21:30835270-30835554 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 107, 44

Conread position: 155-459
Cow position: chr21:6997846-6998152 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 37

Conread position: 163-462
Cow position: chr21:9036211-9036508 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 110

Conread position: 166-462
Cow position: chr21:16152350-16152646 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 32, 111

Conread position: 169-452
Cow position: chr21:10410140-10410423 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 85, 30

Conread position: 170-433
Cow position: chr21:45262889-45262631 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 29

Conread position: 171-452
Cow position: chr21:36909858-36910126 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 28

Conread position: 173-453
Cow position: chr21:21633376-21633105 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 74

Conread position: 179-426
Cow position: chr21:44214056-44214298 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 20

Conread position: 182-423
Cow position: chr21:41140783-41140549 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 74, 11

Conread position: 182-447
Cow position: chr21:7394316-7394569 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 15

Conread position: 185-428
Cow position: chr21:47363806-47363560 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 93

Conread position: 186-447
Cow position: chr21:8349267-8349522 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 77, 13

Conread position: 188-462
Cow position: chr21:18060016-18059753 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 246, 11

Conread position: 193-447
Cow position: chr21:17890246-17890494 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 196-453
Cow position: chr21:868979-868726 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 78

Conread position: 199-456
Cow position: chr21:28919575-28919323 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 76

Conread position: 203-457
Cow position: chr21:19060134-19059890 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 87

Conread position: 203-461
Cow position: chr21:9707319-9707064 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 170
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 152, 49

Conread position: 204-405
Cow position: chr21:22014141-22014341 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 87

Conread position: 206-447
Cow position: chr21:29014957-29014720 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 75

Conread position: 253-447
Cow position: chr21:8431096-8430906 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 180, 17

Show alignments to all cow chromosomes.