Cow genome map

Conread name: rcbl0_007566.y1

Conread position: 2-267
Cow position:
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 54

Conread position: 5-300
Cow position:
Alignm length: 305
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 50

Conread position: 5-445
Cow position:
Alignm length: 443
Alignm identity: 298
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 82, 44

Conread position: 5-462
Cow position:
Alignm length: 462
Alignm identity: 298
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 77, 50

Conread position: 6-462
Cow position:
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 49

Conread position: 7-246
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 78, 28

Conread position: 7-285
Cow position:
Alignm length: 283
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 48

Conread position: 7-286
Cow position:
Alignm length: 285
Alignm identity: 212
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 11, 41

Conread position: 7-301
Cow position:
Alignm length: 303
Alignm identity: 204
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 103, 48

Conread position: 7-329
Cow position:
Alignm length: 325
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 70, 23

Conread position: 7-386
Cow position:
Alignm length: 390
Alignm identity: 251
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 218

Conread position: 7-409
Cow position:
Alignm length: 406
Alignm identity: 260
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 102, 48

Conread position: 7-423
Cow position:
Alignm length: 419
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 33

Conread position: 7-437
Cow position:
Alignm length: 441
Alignm identity: 298
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 79, 20

Conread position: 7-444
Cow position:
Alignm length: 448
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 49

Conread position: 7-447
Cow position:
Alignm length: 452
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 48

Conread position: 7-447
Cow position:
Alignm length: 443
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 28

Conread position: 7-447
Cow position:
Alignm length: 451
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 48

Conread position: 7-461
Cow position:
Alignm length: 469
Alignm identity: 312
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 15

Conread position: 8-437
Cow position:
Alignm length: 444
Alignm identity: 296
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 69, 47

Conread position: 8-462
Cow position:
Alignm length: 468
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 27

Conread position: 10-427
Cow position:
Alignm length: 431
Alignm identity: 293
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 75, 45

Conread position: 13-423
Cow position:
Alignm length: 414
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 22

Conread position: 14-245
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 37

Conread position: 14-414
Cow position:
Alignm length: 404
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 41

Conread position: 14-460
Cow position:
Alignm length: 450
Alignm identity: 297
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 254, 35

Conread position: 15-222
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 20

Conread position: 15-254
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 31, 148

Conread position: 15-258
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 138, 25

Conread position: 15-264
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 174, 43

Conread position: 15-268
Cow position:
Alignm length: 258
Alignm identity: 170
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 36

Conread position: 15-275
Cow position:
Alignm length: 269
Alignm identity: 207
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 70, 34

Conread position: 15-288
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 67, 21

Conread position: 15-293
Cow position:
Alignm length: 285
Alignm identity: 207
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 67, 34

Conread position: 15-298
Cow position:
Alignm length: 288
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 232, 17

Conread position: 15-331
Cow position:
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 40

Conread position: 15-340
Cow position:
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 38

Conread position: 15-394
Cow position:
Alignm length: 385
Alignm identity: 264
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 62, 34

Conread position: 15-409
Cow position:
Alignm length: 402
Alignm identity: 256
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 62, 34

Conread position: 15-427
Cow position:
Alignm length: 424
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 27

Conread position: 15-446
Cow position:
Alignm length: 439
Alignm identity: 292
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 75, 18

Conread position: 15-447
Cow position:
Alignm length: 437
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 40

Conread position: 15-447
Cow position:
Alignm length: 448
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 40

Conread position: 15-449
Cow position:
Alignm length: 454
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 15-452
Cow position:
Alignm length: 446
Alignm identity: 297
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 33

Conread position: 15-461
Cow position:
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 41

Conread position: 15-461
Cow position:
Alignm length: 459
Alignm identity: 302
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 211

Conread position: 15-462
Cow position:
Alignm length: 450
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 34

Conread position: 16-246
Cow position:
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39

Conread position: 16-287
Cow position:
Alignm length: 275
Alignm identity: 198
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 65, 33

Conread position: 16-330
Cow position:
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 16-447
Cow position:
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 19

Conread position: 17-233
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 38

Conread position: 17-254
Cow position:
Alignm length: 251
Alignm identity: 186
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 29, 10

Conread position: 18-452
Cow position:
Alignm length: 443
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 37

Conread position: 21-274
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 17, 35

Conread position: 21-452
Cow position:
Alignm length: 440
Alignm identity: 299
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 56, 37

Conread position: 21-461
Cow position:
Alignm length: 447
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 54

Conread position: 23-427
Cow position:
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 24

Conread position: 24-350
Cow position:
Alignm length: 329
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 31

Conread position: 26-426
Cow position:
Alignm length: 401
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 29-316
Cow position:
Alignm length: 289
Alignm identity: 208
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 26

Conread position: 31-462
Cow position:
Alignm length: 437
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 34-274
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 96, 13

Conread position: 41-382
Cow position:
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 14

Conread position: 42-283
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 211, 110

Conread position: 42-295
Cow position:
Alignm length: 263
Alignm identity: 188
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 17, 55

Conread position: 42-447
Cow position:
Alignm length: 410
Alignm identity: 273
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 35, 123

Conread position: 42-449
Cow position:
Alignm length: 413
Alignm identity: 288
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 40, 15

Conread position: 43-461
Cow position:
Alignm length: 423
Alignm identity: 282
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 74

Conread position: 43-462
Cow position:
Alignm length: 430
Alignm identity: 287
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 102, 9

Conread position: 44-254
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 9

Conread position: 45-285
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 80

Conread position: 45-288
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 12, 161

Conread position: 45-446
Cow position:
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 119

Conread position: 45-454
Cow position:
Alignm length: 420
Alignm identity: 281
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 34, 10

Conread position: 49-331
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 156

Conread position: 50-329
Cow position:
Alignm length: 289
Alignm identity: 205
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 32, 148

Conread position: 50-344
Cow position:
Alignm length: 299
Alignm identity: 207
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 206, 33

Conread position: 50-447
Cow position:
Alignm length: 412
Alignm identity: 276
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 93, 165

Conread position: 51-286
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 163

Conread position: 51-293
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 98

Conread position: 51-395
Cow position:
Alignm length: 349
Alignm identity: 239
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 26, 172

Conread position: 53-276
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 194, 38

Conread position: 54-461
Cow position:
Alignm length: 416
Alignm identity: 276
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 24, 224

Conread position: 55-254
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 22, 116

Conread position: 55-288
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 83, 146

Conread position: 57-254
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 114

Conread position: 57-344
Cow position:
Alignm length: 292
Alignm identity: 203
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 20, 69

Conread position: 57-344
Cow position:
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 74

Conread position: 58-447
Cow position:
Alignm length: 393
Alignm identity: 262
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 292, 24

Conread position: 59-446
Cow position:
Alignm length: 396
Alignm identity: 265
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 146

Conread position: 62-445
Cow position:
Alignm length: 391
Alignm identity: 269
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 78, 104

Conread position: 62-453
Cow position:
Alignm length: 396
Alignm identity: 265
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 55

Conread position: 62-462
Cow position:
Alignm length: 415
Alignm identity: 276
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 196

Conread position: 65-440
Cow position:
Alignm length: 379
Alignm identity: 259
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 191, 105

Conread position: 67-453
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 108

Conread position: 68-452
Cow position:
Alignm length: 390
Alignm identity: 264
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 7, 17

Conread position: 70-388
Cow position:
Alignm length: 323
Alignm identity: 224
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 73

Conread position: 71-266
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 82

Conread position: 72-426
Cow position:
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 70

Conread position: 76-434
Cow position:
Alignm length: 363
Alignm identity: 240
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 71, 127

Conread position: 78-260
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 79-323
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 94

Conread position: 84-248
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 86-447
Cow position:
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 89

Conread position: 87-423
Cow position:
Alignm length: 340
Alignm identity: 236
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 169, 40

Conread position: 91-444
Cow position:
Alignm length: 358
Alignm identity: 231
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 251, 25

Conread position: 100-274
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 100-461
Cow position:
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 333, 5

Conread position: 102-451
Cow position:
Alignm length: 358
Alignm identity: 237
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 101

Conread position: 102-462
Cow position:
Alignm length: 367
Alignm identity: 240
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 94, 67

Conread position: 108-440
Cow position:
Alignm length: 337
Alignm identity: 220
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 147, 37

Conread position: 111-444
Cow position:
Alignm length: 343
Alignm identity: 215
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 102

Conread position: 114-288
Cow position:
Alignm length: 175
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 85, 0

Conread position: 116-254
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 118-421
Cow position:
Alignm length: 308
Alignm identity: 211
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 138, 24

Conread position: 118-451
Cow position:
Alignm length: 338
Alignm identity: 233
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 138, 81

Conread position: 118-457
Cow position:
Alignm length: 347
Alignm identity: 242
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 43

Conread position: 118-462
Cow position:
Alignm length: 361
Alignm identity: 244
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 18, 34

Conread position: 118-462
Cow position:
Alignm length: 350
Alignm identity: 232
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 24

Conread position: 120-393
Cow position:
Alignm length: 280
Alignm identity: 190
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 13, 28

Conread position: 135-390
Cow position:
Alignm length: 257
Alignm identity: 169
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 128, 7

Conread position: 135-461
Cow position:
Alignm length: 337
Alignm identity: 218
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 7

Conread position: 140-445
Cow position:
Alignm length: 311
Alignm identity: 208
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 59

Conread position: 145-462
Cow position:
Alignm length: 321
Alignm identity: 218
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 108, 59

Conread position: 146-268
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 147-442
Cow position:
Alignm length: 302
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 99

Conread position: 149-439
Cow position:
Alignm length: 292
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 284, 50

Conread position: 149-454
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 16

Conread position: 152-452
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 101, 47

Conread position: 153-438
Cow position:
Alignm length: 290
Alignm identity: 194
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 101, 122

Conread position: 163-395
Cow position:
Alignm length: 237
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 130

Conread position: 163-462
Cow position:
Alignm length: 301
Alignm identity: 201
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 91, 36

Conread position: 163-462
Cow position:
Alignm length: 304
Alignm identity: 202
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 111, 36

Conread position: 170-440
Cow position:
Alignm length: 275
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 29

Conread position: 170-454
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 98, 29

Conread position: 173-447
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 258, 26

Conread position: 188-462
Cow position:
Alignm length: 276
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 245, 63

Conread position: 206-452
Cow position:
Alignm length: 254
Alignm identity: 169
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 160

Show alignments to all cow chromosomes.