Cow genome map
| Conread name: | rcbl0_007566.y1 | 
| Conread position: | 1-268 | 
| Cow position: | chr3:16547344-16547610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 54 | 
| Conread position: | 1-306 | 
| Cow position: | chr3:75727921-75727612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 87, 54 | 
| Conread position: | 1-435 | 
| Cow position: | chr3:42423663-42423234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 54 | 
| Conread position: | 1-439 | 
| Cow position: | chr3:59451263-59451702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 197, 53 | 
| Conread position: | 1-461 | 
| Cow position: | chr3:31298489-31298040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 76, 40 | 
| Conread position: | 4-332 | 
| Cow position: | chr3:81939925-81940248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 81, 39 | 
| Conread position: | 4-447 | 
| Cow position: | chr3:15052271-15051851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 250, 64 | 
| Conread position: | 5-298 | 
| Cow position: | chr3:59691576-59691858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 72, 50 | 
| Conread position: | 5-427 | 
| Cow position: | chr3:48252569-48252970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 243, 50 | 
| Conread position: | 5-447 | 
| Cow position: | chr3:79592216-79591785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 30 | 
| Conread position: | 5-453 | 
| Cow position: | chr3:82056437-82056005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 189, 23 | 
| Conread position: | 5-462 | 
| Cow position: | chr3:70566066-70565616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 50 | 
| Conread position: | 6-445 | 
| Cow position: | chr3:80053861-80053440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 49 | 
| Conread position: | 7-204 | 
| Cow position: | chr3:66978517-66978713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 70, 48 | 
| Conread position: | 7-218 | 
| Cow position: | chr3:27553225-27553438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 133, 53 | 
| Conread position: | 7-245 | 
| Cow position: | chr3:62999324-62999089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 70, 22 | 
| Conread position: | 7-248 | 
| Cow position: | chr3:65020006-65020247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 75, 194 | 
| Conread position: | 7-254 | 
| Cow position: | chr3:2483130-2483363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 74, 28 | 
| Conread position: | 7-254 | 
| Cow position: | chr3:7678350-7678585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 7-254 | 
| Cow position: | chr3:16004310-16004073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 78, 13 | 
| Conread position: | 7-254 | 
| Cow position: | chr3:55117295-55117048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 70, 36 | 
| Conread position: | 7-254 | 
| Cow position: | chr3:61361091-61361323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 7-254 | 
| Cow position: | chr3:83920875-83921114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 75, 28 | 
| Conread position: | 7-274 | 
| Cow position: | chr3:22872378-22872107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 48 | 
| Conread position: | 7-274 | 
| Cow position: | chr3:49218633-49218374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 167, 48 | 
| Conread position: | 7-286 | 
| Cow position: | chr3:26894345-26894614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 144, 28 | 
| Conread position: | 7-287 | 
| Cow position: | chr3:8159629-8159904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 103, 48 | 
| Conread position: | 7-288 | 
| Cow position: | chr3:17952330-17952609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 48 | 
| Conread position: | 7-288 | 
| Cow position: | chr3:48296385-48296663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 242, 48 | 
| Conread position: | 7-290 | 
| Cow position: | chr3:42177834-42178112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 247, 48 | 
| Conread position: | 7-330 | 
| Cow position: | chr3:9843252-9843575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 44, 197 | 
| Conread position: | 7-330 | 
| Cow position: | chr3:72018797-72019107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 48 | 
| Conread position: | 7-364 | 
| Cow position: | chr3:13899779-13899425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 48 | 
| Conread position: | 7-378 | 
| Cow position: | chr3:45523939-45524302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 29 | 
| Conread position: | 7-394 | 
| Cow position: | chr3:61857170-61857558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 48 | 
| Conread position: | 7-398 | 
| Cow position: | chr3:22089608-22089220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 78, 52 | 
| Conread position: | 7-405 | 
| Cow position: | chr3:13353034-13353424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 45 | 
| Conread position: | 7-409 | 
| Cow position: | chr3:68042771-68042376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 79, 48 | 
| Conread position: | 7-425 | 
| Cow position: | chr3:5365359-5365760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 37 | 
| Conread position: | 7-427 | 
| Cow position: | chr3:53150000-53150416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 37 | 
| Conread position: | 7-427 | 
| Cow position: | chr3:83490750-83491170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 75, 51 | 
| Conread position: | 7-435 | 
| Cow position: | chr3:55272366-55271951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 249, 40 | 
| Conread position: | 7-440 | 
| Cow position: | chr3:49327620-49328041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 133, 46 | 
| Conread position: | 7-442 | 
| Cow position: | chr3:17935253-17934838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 36, 140 | 
| Conread position: | 7-445 | 
| Cow position: | chr3:59001071-59000654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 249, 34 | 
| Conread position: | 7-446 | 
| Cow position: | chr3:3032075-3032513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 26 | 
| Conread position: | 7-446 | 
| Cow position: | chr3:52017434-52017876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 48 | 
| Conread position: | 7-447 | 
| Cow position: | chr3:7566742-7566312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 23 | 
| Conread position: | 7-447 | 
| Cow position: | chr3:14263069-14263498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 70, 31 | 
| Conread position: | 7-447 | 
| Cow position: | chr3:18066808-18067238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 42 | 
| Conread position: | 7-447 | 
| Cow position: | chr3:30179758-30180192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 42 | 
| Conread position: | 7-447 | 
| Cow position: | chr3:48241295-48241719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 49 | 
| Conread position: | 7-452 | 
| Cow position: | chr3:80071791-80072236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 48 | 
| Conread position: | 7-457 | 
| Cow position: | chr3:17695329-17694889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 28 | 
| Conread position: | 7-457 | 
| Cow position: | chr3:49678796-49679247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 77, 42 | 
| Conread position: | 7-461 | 
| Cow position: | chr3:18184742-18185194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 48 | 
| Conread position: | 7-461 | 
| Cow position: | chr3:53593025-53592569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 26 | 
| Conread position: | 7-461 | 
| Cow position: | chr3:79220523-79220978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 47 | 
| Conread position: | 7-461 | 
| Cow position: | chr3:79902177-79902614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 48 | 
| Conread position: | 7-462 | 
| Cow position: | chr3:209996-210440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 48 | 
| Conread position: | 7-462 | 
| Cow position: | chr3:9663513-9663051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 69, 42 | 
| Conread position: | 7-462 | 
| Cow position: | chr3:14724971-14725434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 77, 44 | 
| Conread position: | 8-289 | 
| Cow position: | chr3:31047267-31046997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 73, 47 | 
| Conread position: | 8-373 | 
| Cow position: | chr3:6078660-6078299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 88, 47 | 
| Conread position: | 8-447 | 
| Cow position: | chr3:14466029-14465601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 34 | 
| Conread position: | 11-462 | 
| Cow position: | chr3:11254474-11254047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 63, 36 | 
| Conread position: | 11-462 | 
| Cow position: | chr3:31309684-31309233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 193 | 
| Conread position: | 13-255 | 
| Cow position: | chr3:48530318-48530565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 72, 42 | 
| Conread position: | 13-285 | 
| Cow position: | chr3:66610158-66609892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 45 | 
| Conread position: | 13-288 | 
| Cow position: | chr3:82657405-82657133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 64, 43 | 
| Conread position: | 13-293 | 
| Cow position: | chr3:7858032-7858326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 64, 35 | 
| Conread position: | 13-331 | 
| Cow position: | chr3:79208311-79207997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 68, 35 | 
| Conread position: | 13-332 | 
| Cow position: | chr3:41367303-41366990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 241, 36 | 
| Conread position: | 13-449 | 
| Cow position: | chr3:71246715-71247123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 236, 117 | 
| Conread position: | 13-460 | 
| Cow position: | chr3:49461257-49460807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 42 | 
| Conread position: | 13-461 | 
| Cow position: | chr3:31419376-31419812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 147 | 
| Conread position: | 13-462 | 
| Cow position: | chr3:2506799-2506358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 35 | 
| Conread position: | 13-462 | 
| Cow position: | chr3:29891737-29891288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 42 | 
| Conread position: | 14-243 | 
| Cow position: | chr3:53222967-53222733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 14-287 | 
| Cow position: | chr3:6853822-6853553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 28, 42 | 
| Conread position: | 14-332 | 
| Cow position: | chr3:59271240-59271533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 240, 35 | 
| Conread position: | 14-344 | 
| Cow position: | chr3:39328093-39328400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 240, 40 | 
| Conread position: | 14-358 | 
| Cow position: | chr3:59514795-59515120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 68, 21 | 
| Conread position: | 14-373 | 
| Cow position: | chr3:33698406-33698762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 19 | 
| Conread position: | 14-382 | 
| Cow position: | chr3:61171821-61171467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 193, 41 | 
| Conread position: | 15-254 | 
| Cow position: | chr3:12323750-12323991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 62, 34 | 
| Conread position: | 15-254 | 
| Cow position: | chr3:18393702-18393471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 66, 42 | 
| Conread position: | 15-260 | 
| Cow position: | chr3:23277860-23277621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 62, 20 | 
| Conread position: | 15-268 | 
| Cow position: | chr3:8716929-8717186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 140, 40 | 
| Conread position: | 15-274 | 
| Cow position: | chr3:15662016-15661760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 65, 20 | 
| Conread position: | 15-276 | 
| Cow position: | chr3:69751019-69750760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 67, 33 | 
| Conread position: | 15-286 | 
| Cow position: | chr3:27544652-27544381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 43, 17 | 
| Conread position: | 15-286 | 
| Cow position: | chr3:29807145-29807416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 66, 28 | 
| Conread position: | 15-321 | 
| Cow position: | chr3:13118029-13118321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 61, 53 | 
| Conread position: | 15-321 | 
| Cow position: | chr3:21341281-21340979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 63, 34 | 
| Conread position: | 15-324 | 
| Cow position: | chr3:54782329-54782027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 66, 27 | 
| Conread position: | 15-329 | 
| Cow position: | chr3:45312734-45313037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 151, 0 | 
| Conread position: | 15-329 | 
| Cow position: | chr3:61678373-61678692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 40 | 
| Conread position: | 15-330 | 
| Cow position: | chr3:50614327-50614629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 235, 34 | 
| Conread position: | 15-331 | 
| Cow position: | chr3:80082135-80081824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 62, 40 | 
| Conread position: | 15-332 | 
| Cow position: | chr3:3164811-3164505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 64, 20 | 
| Conread position: | 15-333 | 
| Cow position: | chr3:49230697-49231008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 130, 33 | 
| Conread position: | 15-395 | 
| Cow position: | chr3:2035980-2036358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 81, 40 | 
| Conread position: | 15-395 | 
| Cow position: | chr3:61539479-61539854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 17 | 
| Conread position: | 15-416 | 
| Cow position: | chr3:62541996-62542385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 70, 40 | 
| Conread position: | 15-421 | 
| Cow position: | chr3:58969211-58968824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 27 | 
| Conread position: | 15-423 | 
| Cow position: | chr3:29887742-29887339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 40 | 
| Conread position: | 15-423 | 
| Cow position: | chr3:36672323-36671914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 62, 40 | 
| Conread position: | 15-427 | 
| Cow position: | chr3:49650062-49650473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 40 | 
| Conread position: | 15-427 | 
| Cow position: | chr3:59101517-59101912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 74, 40 | 
| Conread position: | 15-429 | 
| Cow position: | chr3:10347029-10347442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 20, 191 | 
| Conread position: | 15-430 | 
| Cow position: | chr3:79884804-79884398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 40 | 
| Conread position: | 15-432 | 
| Cow position: | chr3:18459838-18459438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 40 | 
| Conread position: | 15-433 | 
| Cow position: | chr3:37599734-37599337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 76, 40 | 
| Conread position: | 15-433 | 
| Cow position: | chr3:55970189-55970597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 27 | 
| Conread position: | 15-435 | 
| Cow position: | chr3:55085508-55085077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 272 | 
| Conread position: | 15-436 | 
| Cow position: | chr3:83816119-83815694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 184 | 
| Conread position: | 15-437 | 
| Cow position: | chr3:72675769-72676188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 40 | 
| Conread position: | 15-440 | 
| Cow position: | chr3:26920577-26921007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 76 | 
| Conread position: | 15-441 | 
| Cow position: | chr3:4049885-4050291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 29, 75 | 
| Conread position: | 15-442 | 
| Cow position: | chr3:58766974-58767360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 15-444 | 
| Cow position: | chr3:49382634-49383051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 40 | 
| Conread position: | 15-446 | 
| Cow position: | chr3:12712241-12711810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 43 | 
| Conread position: | 15-446 | 
| Cow position: | chr3:26903799-26904215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 34 | 
| Conread position: | 15-446 | 
| Cow position: | chr3:71231088-71231498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 40 | 
| Conread position: | 15-446 | 
| Cow position: | chr3:81471415-81470993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 20 | 
| Conread position: | 15-447 | 
| Cow position: | chr3:67704218-67704648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 151 | 
| Conread position: | 15-447 | 
| Cow position: | chr3:68586723-68587127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 70, 20 | 
| Conread position: | 15-447 | 
| Cow position: | chr3:74088479-74088074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 125, 34 | 
| Conread position: | 15-451 | 
| Cow position: | chr3:67929584-67929148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 40 | 
| Conread position: | 15-452 | 
| Cow position: | chr3:59630818-59630404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 62, 40 | 
| Conread position: | 15-452 | 
| Cow position: | chr3:64011134-64010706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 62, 22 | 
| Conread position: | 15-453 | 
| Cow position: | chr3:2024866-2025308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 40 | 
| Conread position: | 15-454 | 
| Cow position: | chr3:11987013-11987442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 70, 27 | 
| Conread position: | 15-454 | 
| Cow position: | chr3:59473798-59474234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 69, 40 | 
| Conread position: | 15-454 | 
| Cow position: | chr3:65236701-65237137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 34, 128 | 
| Conread position: | 15-454 | 
| Cow position: | chr3:80564640-80565078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 42 | 
| Conread position: | 15-456 | 
| Cow position: | chr3:2674711-2675144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 39 | 
| Conread position: | 15-457 | 
| Cow position: | chr3:31206554-31206992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 40 | 
| Conread position: | 15-457 | 
| Cow position: | chr3:53573068-53572636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 40 | 
| Conread position: | 15-460 | 
| Cow position: | chr3:54903255-54903683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 125, 40 | 
| Conread position: | 15-461 | 
| Cow position: | chr3:31056320-31055893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 62, 40 | 
| Conread position: | 15-461 | 
| Cow position: | chr3:57754798-57754358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 40 | 
| Conread position: | 15-462 | 
| Cow position: | chr3:57577381-57577815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 40 | 
| Conread position: | 15-462 | 
| Cow position: | chr3:68303010-68303436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 74, 34 | 
| Conread position: | 15-462 | 
| Cow position: | chr3:72390765-72391206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 55 | 
| Conread position: | 15-462 | 
| Cow position: | chr3:77271596-77271160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 30, 147 | 
| Conread position: | 16-254 | 
| Cow position: | chr3:8147979-8147751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 75, 12 | 
| Conread position: | 16-422 | 
| Cow position: | chr3:61839974-61840355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 61, 33 | 
| Conread position: | 16-427 | 
| Cow position: | chr3:53112851-53113260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 39 | 
| Conread position: | 16-440 | 
| Cow position: | chr3:75479700-75480099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 73, 14 | 
| Conread position: | 16-444 | 
| Cow position: | chr3:74600803-74601215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 76, 15 | 
| Conread position: | 16-447 | 
| Cow position: | chr3:68146144-68145742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 28, 70 | 
| Conread position: | 16-457 | 
| Cow position: | chr3:68647843-68648290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 69, 39 | 
| Conread position: | 16-461 | 
| Cow position: | chr3:24549149-24548717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 61, 33 | 
| Conread position: | 17-427 | 
| Cow position: | chr3:34270618-34270999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 239, 18 | 
| Conread position: | 17-448 | 
| Cow position: | chr3:73961995-73961590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 60, 34 | 
| Conread position: | 18-340 | 
| Cow position: | chr3:69849817-69849509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 61, 37 | 
| Conread position: | 20-460 | 
| Cow position: | chr3:20129628-20130053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 35 | 
| Conread position: | 21-288 | 
| Cow position: | chr3:19708409-19708151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 235, 11 | 
| Conread position: | 21-405 | 
| Cow position: | chr3:70895734-70896111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 34 | 
| Conread position: | 21-405 | 
| Cow position: | chr3:75711001-75711369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 23, 109 | 
| Conread position: | 21-427 | 
| Cow position: | chr3:38346891-38347275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 56, 21 | 
| Conread position: | 21-439 | 
| Cow position: | chr3:14626462-14626052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 232, 28 | 
| Conread position: | 21-447 | 
| Cow position: | chr3:53790856-53790430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 34 | 
| Conread position: | 21-451 | 
| Cow position: | chr3:46900883-46901306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 34 | 
| Conread position: | 21-454 | 
| Cow position: | chr3:2393284-2392855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 150 | 
| Conread position: | 22-254 | 
| Cow position: | chr3:29812929-29813161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 13, 180 | 
| Conread position: | 22-285 | 
| Cow position: | chr3:57554157-57553901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 58, 6 | 
| Conread position: | 22-293 | 
| Cow position: | chr3:67161621-67161899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 114, 33 | 
| Conread position: | 22-327 | 
| Cow position: | chr3:46350341-46350659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 30, 264 | 
| Conread position: | 22-445 | 
| Cow position: | chr3:53270514-53270934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 37 | 
| Conread position: | 23-447 | 
| Cow position: | chr3:37041118-37041524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 27 | 
| Conread position: | 23-454 | 
| Cow position: | chr3:82460873-82461290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 26 | 
| Conread position: | 23-458 | 
| Cow position: | chr3:25690479-25690910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 10 | 
| Conread position: | 23-462 | 
| Cow position: | chr3:65968845-65969292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 26 | 
| Conread position: | 24-287 | 
| Cow position: | chr3:27285916-27286183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 25 | 
| Conread position: | 24-340 | 
| Cow position: | chr3:65800286-65800590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 25 | 
| Conread position: | 25-257 | 
| Cow position: | chr3:35975413-35975188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 63, 24 | 
| Conread position: | 25-332 | 
| Cow position: | chr3:77227010-77227315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 56, 24 | 
| Conread position: | 26-231 | 
| Cow position: | chr3:58158771-58158569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 114, 29 | 
| Conread position: | 26-440 | 
| Cow position: | chr3:61278594-61279007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 23, 146 | 
| Conread position: | 27-254 | 
| Cow position: | chr3:56704845-56704627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 19, 6 | 
| Conread position: | 27-456 | 
| Cow position: | chr3:53739499-53739074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 178 | 
| Conread position: | 28-288 | 
| Cow position: | chr3:18763589-18763847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 52, 27 | 
| Conread position: | 28-427 | 
| Cow position: | chr3:2216055-2216453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 27 | 
| Conread position: | 28-449 | 
| Cow position: | chr3:70401598-70402000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 29-282 | 
| Cow position: | chr3:44535064-44534813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 120, 17 | 
| Conread position: | 30-446 | 
| Cow position: | chr3:53909811-53910213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 72, 25 | 
| Conread position: | 32-452 | 
| Cow position: | chr3:72473606-72474030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 57, 23 | 
| Conread position: | 33-436 | 
| Cow position: | chr3:62826923-62826522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 49, 22 | 
| Conread position: | 33-456 | 
| Cow position: | chr3:6689691-6690115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 22 | 
| Conread position: | 33-461 | 
| Cow position: | chr3:48852266-48851850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 22 | 
| Conread position: | 35-285 | 
| Cow position: | chr3:11019820-11020072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 50, 20 | 
| Conread position: | 36-253 | 
| Cow position: | chr3:34392398-34392181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 22, 134 | 
| Conread position: | 36-324 | 
| Cow position: | chr3:80740281-80740549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 220, 13 | 
| Conread position: | 36-462 | 
| Cow position: | chr3:23876699-23877121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 46, 110 | 
| Conread position: | 37-265 | 
| Cow position: | chr3:36100529-36100762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 5, 218 | 
| Conread position: | 37-274 | 
| Cow position: | chr3:70333771-70333541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 167, 46 | 
| Conread position: | 37-285 | 
| Cow position: | chr3:25691450-25691704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 5, 141 | 
| Conread position: | 37-315 | 
| Cow position: | chr3:35074386-35074663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 10, 28 | 
| Conread position: | 39-248 | 
| Cow position: | chr3:59208518-59208725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 37, 160 | 
| Conread position: | 39-419 | 
| Cow position: | chr3:71430507-71430127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 43, 18 | 
| Conread position: | 41-254 | 
| Cow position: | chr3:18854799-18855012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 102 | 
| Conread position: | 41-446 | 
| Cow position: | chr3:3985036-3985426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 35, 122 | 
| Conread position: | 42-245 | 
| Cow position: | chr3:51609523-51609729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 38, 162 | 
| Conread position: | 42-276 | 
| Cow position: | chr3:33253171-33252935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 152, 31 | 
| Conread position: | 42-378 | 
| Cow position: | chr3:76138195-76138507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 13, 111 | 
| Conread position: | 42-457 | 
| Cow position: | chr3:18497732-18498131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 382, 40 | 
| Conread position: | 42-462 | 
| Cow position: | chr3:14602006-14601585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 92, 102 | 
| Conread position: | 42-462 | 
| Cow position: | chr3:65413568-65413156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 393, 81 | 
| Conread position: | 43-274 | 
| Cow position: | chr3:19006375-19006599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 39, 110 | 
| Conread position: | 43-387 | 
| Cow position: | chr3:73759811-73759472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 34, 67 | 
| Conread position: | 43-427 | 
| Cow position: | chr3:66292471-66292091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 7, 159 | 
| Conread position: | 43-434 | 
| Cow position: | chr3:15229111-15228731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 39, 120 | 
| Conread position: | 43-444 | 
| Cow position: | chr3:73443379-73442993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 155 | 
| Conread position: | 43-452 | 
| Cow position: | chr3:66901034-66900622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 205 | 
| Conread position: | 45-332 | 
| Cow position: | chr3:364509-364222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 31, 219 | 
| Conread position: | 45-462 | 
| Cow position: | chr3:39970162-39969745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 32, 159 | 
| Conread position: | 46-294 | 
| Cow position: | chr3:42588061-42588316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 35, 11 | 
| Conread position: | 47-415 | 
| Cow position: | chr3:68583290-68582927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 299, 152 | 
| Conread position: | 49-234 | 
| Cow position: | chr3:59392393-59392207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 90, 33 | 
| Conread position: | 49-260 | 
| Cow position: | chr3:79148562-79148347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 27, 204 | 
| Conread position: | 49-294 | 
| Cow position: | chr3:19198395-19198635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 35, 151 | 
| Conread position: | 49-394 | 
| Cow position: | chr3:71161508-71161851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 44, 151 | 
| Conread position: | 49-432 | 
| Cow position: | chr3:8393060-8393434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 155 | 
| Conread position: | 50-287 | 
| Cow position: | chr3:38691689-38691455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 132, 7 | 
| Conread position: | 51-286 | 
| Cow position: | chr3:17895570-17895795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 31, 80 | 
| Conread position: | 51-288 | 
| Cow position: | chr3:63179584-63179812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 31, 102 | 
| Conread position: | 51-321 | 
| Cow position: | chr3:78946123-78945852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 31, 62 | 
| Conread position: | 51-330 | 
| Cow position: | chr3:78894598-78894337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 31, 92 | 
| Conread position: | 51-421 | 
| Cow position: | chr3:56653-56298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 82, 30 | 
| Conread position: | 51-423 | 
| Cow position: | chr3:5096919-5097288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 107 | 
| Conread position: | 51-447 | 
| Cow position: | chr3:52863467-52863077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 41 | 
| Conread position: | 51-452 | 
| Cow position: | chr3:80581387-80581764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 102 | 
| Conread position: | 51-457 | 
| Cow position: | chr3:23471752-23471342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 153 | 
| Conread position: | 51-461 | 
| Cow position: | chr3:17957183-17957578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 50 | 
| Conread position: | 52-448 | 
| Cow position: | chr3:20675162-20674771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 33, 63 | 
| Conread position: | 53-316 | 
| Cow position: | chr3:39171766-39171506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 20, 142 | 
| Conread position: | 53-405 | 
| Cow position: | chr3:68881391-68881058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 81, 24 | 
| Conread position: | 54-440 | 
| Cow position: | chr3:6873526-6873155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 23, 150 | 
| Conread position: | 54-455 | 
| Cow position: | chr3:77365575-77365176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 78 | 
| Conread position: | 55-423 | 
| Cow position: | chr3:5374055-5374409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 85, 23 | 
| Conread position: | 57-272 | 
| Cow position: | chr3:57763945-57764165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 25, 147 | 
| Conread position: | 57-281 | 
| Cow position: | chr3:42367767-42367555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 25, 44 | 
| Conread position: | 57-288 | 
| Cow position: | chr3:75570719-75570497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 143, 59 | 
| Conread position: | 57-290 | 
| Cow position: | chr3:75158087-75158315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 28, 84 | 
| Conread position: | 57-332 | 
| Cow position: | chr3:63861179-63860899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 25, 222 | 
| Conread position: | 57-333 | 
| Cow position: | chr3:49731915-49731648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 199, 105 | 
| Conread position: | 57-344 | 
| Cow position: | chr3:5416509-5416218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 25, 114 | 
| Conread position: | 57-423 | 
| Cow position: | chr3:26065723-26066082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 19, 118 | 
| Conread position: | 57-445 | 
| Cow position: | chr3:70334980-70334591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 25, 5 | 
| Conread position: | 57-446 | 
| Cow position: | chr3:44101703-44102071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 18, 71 | 
| Conread position: | 57-447 | 
| Cow position: | chr3:55836105-55835716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 32, 6 | 
| Conread position: | 57-452 | 
| Cow position: | chr3:53046935-53046556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 114 | 
| Conread position: | 57-462 | 
| Cow position: | chr3:49482982-49482594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 148, 26 | 
| Conread position: | 59-368 | 
| Cow position: | chr3:74499948-74500269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 23, 249 | 
| Conread position: | 59-426 | 
| Cow position: | chr3:73764469-73764116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 200, 31 | 
| Conread position: | 59-445 | 
| Cow position: | chr3:69417066-69416677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 5, 147 | 
| Conread position: | 59-447 | 
| Cow position: | chr3:38863837-38864229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 22, 98 | 
| Conread position: | 59-451 | 
| Cow position: | chr3:57624187-57624570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 23, 106 | 
| Conread position: | 61-423 | 
| Cow position: | chr3:525080-525427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 89 | 
| Conread position: | 62-445 | 
| Cow position: | chr3:54945852-54946235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 78, 141 | 
| Conread position: | 63-290 | 
| Cow position: | chr3:5899554-5899779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 185, 42 | 
| Conread position: | 63-439 | 
| Cow position: | chr3:60933143-60933513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 14, 177 | 
| Conread position: | 63-447 | 
| Cow position: | chr3:45279185-45279572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 14, 194 | 
| Conread position: | 63-452 | 
| Cow position: | chr3:29596121-29596497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 19, 101 | 
| Conread position: | 64-344 | 
| Cow position: | chr3:84000341-84000615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 18, 138 | 
| Conread position: | 65-445 | 
| Cow position: | chr3:13302126-13301747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 12, 107 | 
| Conread position: | 65-447 | 
| Cow position: | chr3:51578591-51578220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 17, 140 | 
| Conread position: | 67-254 | 
| Cow position: | chr3:52650797-52650614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 88, 11 | 
| Conread position: | 68-444 | 
| Cow position: | chr3:73394849-73395217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 17, 136 | 
| Conread position: | 70-254 | 
| Cow position: | chr3:23269838-23270015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 70-254 | 
| Cow position: | chr3:55970960-55971143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 10, 101 | 
| Conread position: | 72-316 | 
| Cow position: | chr3:48578579-48578815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 184, 48 | 
| Conread position: | 73-254 | 
| Cow position: | chr3:8604275-8604097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 73-289 | 
| Cow position: | chr3:28692691-28692478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 181, 76 | 
| Conread position: | 73-460 | 
| Cow position: | chr3:2680250-2680632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 67, 131 | 
| Conread position: | 74-447 | 
| Cow position: | chr3:13507202-13507574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 5, 102 | 
| Conread position: | 74-447 | 
| Cow position: | chr3:43233243-43233612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 66, 129 | 
| Conread position: | 75-436 | 
| Cow position: | chr3:23448390-23448042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 178, 86 | 
| Conread position: | 78-273 | 
| Cow position: | chr3:61143837-61144038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 78-293 | 
| Cow position: | chr3:22820313-22820527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 176, 64 | 
| Conread position: | 78-325 | 
| Cow position: | chr3:4087422-4087176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 116, 82 | 
| Conread position: | 78-438 | 
| Cow position: | chr3:51234352-51234000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 177, 78 | 
| Conread position: | 78-439 | 
| Cow position: | chr3:56476426-56476780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 176, 74 | 
| Conread position: | 78-447 | 
| Cow position: | chr3:18686660-18687010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 78-447 | 
| Cow position: | chr3:71237901-71238259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 355, 34 | 
| Conread position: | 78-456 | 
| Cow position: | chr3:3556288-3556660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 55, 16 | 
| Conread position: | 79-286 | 
| Cow position: | chr3:26970570-26970778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 61, 122 | 
| Conread position: | 80-274 | 
| Cow position: | chr3:41328201-41328386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 176, 78 | 
| Conread position: | 80-341 | 
| Cow position: | chr3:73590252-73589996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 174, 20 | 
| Conread position: | 81-403 | 
| Cow position: | chr3:11711700-11712026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 64, 31 | 
| Conread position: | 82-462 | 
| Cow position: | chr3:52652326-52651962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 174, 83 | 
| Conread position: | 83-461 | 
| Cow position: | chr3:5045061-5044693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 53, 180 | 
| Conread position: | 84-331 | 
| Cow position: | chr3:15752878-15752642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 14, 18 | 
| Conread position: | 84-437 | 
| Cow position: | chr3:15192313-15192676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 17, 12 | 
| Conread position: | 86-444 | 
| Cow position: | chr3:44932260-44932616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 54, 117 | 
| Conread position: | 86-461 | 
| Cow position: | chr3:55947327-55947716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 54, 190 | 
| Conread position: | 90-410 | 
| Cow position: | chr3:23445134-23444820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 188, 61 | 
| Conread position: | 90-461 | 
| Cow position: | chr3:30055690-30055332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 300, 66 | 
| Conread position: | 94-283 | 
| Cow position: | chr3:83201768-83201578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 51, 109 | 
| Conread position: | 94-461 | 
| Cow position: | chr3:39661690-39661337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 339, 62 | 
| Conread position: | 95-248 | 
| Cow position: | chr3:80922329-80922480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 95-419 | 
| Cow position: | chr3:22232882-22232577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 151, 38 | 
| Conread position: | 95-454 | 
| Cow position: | chr3:8060893-8061238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 158, 38 | 
| Conread position: | 97-461 | 
| Cow position: | chr3:188622-188992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 66, 258 | 
| Conread position: | 98-451 | 
| Cow position: | chr3:21547339-21546990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 6, 141 | 
| Conread position: | 99-260 | 
| Cow position: | chr3:23215819-23215650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 46, 161 | 
| Conread position: | 100-254 | 
| Cow position: | chr3:29334748-29334594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 55, 101 | 
| Conread position: | 100-274 | 
| Cow position: | chr3:4861455-4861623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 100-396 | 
| Cow position: | chr3:34937606-34937898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 48, 102 | 
| Conread position: | 100-452 | 
| Cow position: | chr3:17447842-17447506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 101-340 | 
| Cow position: | chr3:55106676-55106441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 52, 109 | 
| Conread position: | 101-450 | 
| Cow position: | chr3:67930411-67930080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 7, 38 | 
| Conread position: | 105-412 | 
| Cow position: | chr3:76015070-76015362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 148, 42 | 
| Conread position: | 106-297 | 
| Cow position: | chr3:53836913-53836727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 175, 76 | 
| Conread position: | 106-461 | 
| Cow position: | chr3:63507492-63507140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 164, 53 | 
| Conread position: | 107-444 | 
| Cow position: | chr3:15506220-15506552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 38, 96 | 
| Conread position: | 108-437 | 
| Cow position: | chr3:26960821-26960492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 26, 39 | 
| Conread position: | 109-274 | 
| Cow position: | chr3:56301573-56301405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 35, 92 | 
| Conread position: | 109-332 | 
| Cow position: | chr3:21051063-21050847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 145, 30 | 
| Conread position: | 115-446 | 
| Cow position: | chr3:76268201-76267872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 12, 23 | 
| Conread position: | 117-462 | 
| Cow position: | chr3:23105583-23105247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 118-452 | 
| Cow position: | chr3:4319494-4319819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 22, 85 | 
| Conread position: | 118-452 | 
| Cow position: | chr3:46006247-46005911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 27, 89 | 
| Conread position: | 118-461 | 
| Cow position: | chr3:25944861-25945213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 42, 134 | 
| Conread position: | 118-462 | 
| Cow position: | chr3:45211079-45211422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 35, 110 | 
| Conread position: | 119-387 | 
| Cow position: | chr3:76713537-76713280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 135, 40 | 
| Conread position: | 119-425 | 
| Cow position: | chr3:78896433-78896729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 22, 65 | 
| Conread position: | 120-286 | 
| Cow position: | chr3:25059859-25060029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 33, 83 | 
| Conread position: | 120-329 | 
| Cow position: | chr3:3062348-3062555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 79, 40 | 
| Conread position: | 120-391 | 
| Cow position: | chr3:74878804-74878540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 136, 50 | 
| Conread position: | 122-446 | 
| Cow position: | chr3:36375760-36375435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 18, 80 | 
| Conread position: | 128-452 | 
| Cow position: | chr3:15751929-15751604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 19, 72 | 
| Conread position: | 129-444 | 
| Cow position: | chr3:57760293-57760601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 130, 70 | 
| Conread position: | 134-332 | 
| Cow position: | chr3:59885184-59885383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 122, 148 | 
| Conread position: | 134-340 | 
| Cow position: | chr3:7940756-7940555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 116, 65 | 
| Conread position: | 134-424 | 
| Cow position: | chr3:67520376-67520084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 135-274 | 
| Cow position: | chr3:3637988-3638127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 119, 7 | 
| Conread position: | 135-433 | 
| Cow position: | chr3:27697177-27696887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 121, 7 | 
| Conread position: | 135-445 | 
| Cow position: | chr3:55712231-55712544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 119, 7 | 
| Conread position: | 135-448 | 
| Cow position: | chr3:38828568-38828863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 40, 7 | 
| Conread position: | 135-453 | 
| Cow position: | chr3:49791007-49790702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 138-391 | 
| Cow position: | chr3:81359311-81359058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 14, 9 | 
| Conread position: | 140-291 | 
| Cow position: | chr3:21693751-21693902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 130, 112 | 
| Conread position: | 140-331 | 
| Cow position: | chr3:70631824-70632007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 140-445 | 
| Cow position: | chr3:66884135-66883841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 113, 59 | 
| Conread position: | 140-445 | 
| Cow position: | chr3:67698085-67698380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 113, 61 | 
| Conread position: | 140-447 | 
| Cow position: | chr3:74079833-74079529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 122, 59 | 
| Conread position: | 141-460 | 
| Cow position: | chr3:83727440-83727133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 112, 79 | 
| Conread position: | 141-462 | 
| Cow position: | chr3:13890274-13890598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 67, 136 | 
| Conread position: | 143-451 | 
| Cow position: | chr3:63269034-63269329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 143-461 | 
| Cow position: | chr3:83798030-83797706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 61, 129 | 
| Conread position: | 143-462 | 
| Cow position: | chr3:54374052-54373739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 31, 57 | 
| Conread position: | 145-316 | 
| Cow position: | chr3:27212173-27212338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 109, 20 | 
| Conread position: | 145-427 | 
| Cow position: | chr3:34669917-34669648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 114, 54 | 
| Conread position: | 148-446 | 
| Cow position: | chr3:19198801-19199090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 118, 51 | 
| Conread position: | 148-458 | 
| Cow position: | chr3:75687625-75687321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 106, 54 | 
| Conread position: | 148-461 | 
| Cow position: | chr3:1453308-1453006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 108, 69 | 
| Conread position: | 149-425 | 
| Cow position: | chr3:74502507-74502242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 238, 50 | 
| Conread position: | 149-427 | 
| Cow position: | chr3:54506522-54506792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 10, 52 | 
| Conread position: | 149-452 | 
| Cow position: | chr3:53318218-53318512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 105, 50 | 
| Conread position: | 152-388 | 
| Cow position: | chr3:79092577-79092346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 104, 121 | 
| Conread position: | 153-288 | 
| Cow position: | chr3:26981883-26982019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 103, 46 | 
| Conread position: | 155-454 | 
| Cow position: | chr3:70762302-70762009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 95, 44 | 
| Conread position: | 157-391 | 
| Cow position: | chr3:44837558-44837327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 76, 93 | 
| Conread position: | 163-384 | 
| Cow position: | chr3:55819576-55819800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 87, 118 | 
| Conread position: | 163-454 | 
| Cow position: | chr3:19792721-19793014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 93, 39 | 
| Conread position: | 163-456 | 
| Cow position: | chr3:23920601-23920314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 91, 40 | 
| Conread position: | 163-458 | 
| Cow position: | chr3:32787289-32787577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 90, 62 | 
| Conread position: | 165-440 | 
| Cow position: | chr3:76922832-76922568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 91, 34 | 
| Conread position: | 165-452 | 
| Cow position: | chr3:26874421-26874700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 46, 14 | 
| Conread position: | 166-462 | 
| Cow position: | chr3:2648684-2648390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 15, 77 | 
| Conread position: | 169-423 | 
| Cow position: | chr3:55109780-55109532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 87, 13 | 
| Conread position: | 169-425 | 
| Cow position: | chr3:30222020-30222274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 176, 35 | 
| Conread position: | 169-445 | 
| Cow position: | chr3:68616490-68616226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 78, 30 | 
| Conread position: | 169-447 | 
| Cow position: | chr3:3913616-3913336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 54, 106 | 
| Conread position: | 169-460 | 
| Cow position: | chr3:81507277-81506991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 264, 70 | 
| Conread position: | 169-461 | 
| Cow position: | chr3:26739585-26739307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 85, 114 | 
| Conread position: | 170-447 | 
| Cow position: | chr3:59884237-59883964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 86, 29 | 
| Conread position: | 175-457 | 
| Cow position: | chr3:59034874-59035156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 24, 98 | 
| Conread position: | 179-462 | 
| Cow position: | chr3:19585706-19585982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 74, 20 | 
| Conread position: | 182-445 | 
| Cow position: | chr3:55177905-55177642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 71, 16 | 
| Conread position: | 182-462 | 
| Cow position: | chr3:19793745-19793472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 57, 17 | 
| Conread position: | 183-462 | 
| Cow position: | chr3:24468530-24468264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 250, 9 | 
| Conread position: | 185-462 | 
| Cow position: | chr3:79196610-79196881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 270, 14 | 
| Conread position: | 187-462 | 
| Cow position: | chr3:21015113-21014835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 9, 87 | 
| Conread position: | 193-462 | 
| Cow position: | chr3:73820514-73820244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 61, 81 | 
| Conread position: | 194-457 | 
| Cow position: | chr3:59040424-59040683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 56, 88 | 
| Conread position: | 195-462 | 
| Cow position: | chr3:48900480-48900212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 68, 34 | 
| Conread position: | 203-457 | 
| Cow position: | chr3:15443864-15443613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 53, 78 | 
| Conread position: | 206-447 | 
| Cow position: | chr3:22509895-22510129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 48, 68 | 
| Conread position: | 206-452 | 
| Cow position: | chr3:84175957-84175713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 48, 75 | 
| Conread position: | 206-462 | 
| Cow position: | chr3:72342113-72342366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 56, 46 | 
| Conread position: | 208-457 | 
| Cow position: | chr3:18144251-18144000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 45, 92 | 
| Conread position: | 231-462 | 
| Cow position: | chr3:3656407-3656636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 25, 52 | 
Show alignments to all cow chromosomes.
