Cow genome map

Conread name: rcbl0_008623.y1

Conread position: 1-123
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 1-129
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-145
Cow position:
Alignm length: 146
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 21, 13

Conread position: 1-149
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 120

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 1-151
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 68, 41

Conread position: 1-152
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 13

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 1-155
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 69, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 1-159
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 21

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 1-162
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 1-165
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 164

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 1-166
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 161, 103

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 6, 0

Conread position: 1-166
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 1-166
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 13

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 1-167
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 13

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 133, 0

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 154, 0

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 152, 65

Conread position: 1-167
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 153, 37

Conread position: 1-167
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 151, 54

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 142, 16

Conread position: 1-168
Cow position:
Alignm length: 169
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 152, 125

Conread position: 1-168
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 151, 16

Conread position: 1-168
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 62

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 70, 0

Conread position: 1-168
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 13

Conread position: 1-168
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 124, 13

Conread position: 1-168
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 12

Conread position: 1-168
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 20, 57

Conread position: 1-168
Cow position:
Alignm length: 170
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 65, 58

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 54

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 1-169
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 33

Conread position: 1-169
Cow position:
Alignm length: 171
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 152, 0

Conread position: 1-169
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 1-169
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 37

Conread position: 1-169
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-169
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 152, 60

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-169
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 1-169
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 152, 0

Conread position: 1-169
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 128

Conread position: 1-169
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 65, 152

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 21, 13

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 13

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 131, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-171
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 154, 115

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-172
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 153, 0

Conread position: 1-174
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 63, 124

Conread position: 1-175
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1-176
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 171, 70

Conread position: 1-178
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 82

Conread position: 1-179
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 157, 43

Conread position: 1-179
Cow position:
Alignm length: 179
Alignm identity: 124
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 131, 0

Conread position: 1-179
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 68, 0

Conread position: 1-179
Cow position:
Alignm length: 181
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 11

Conread position: 1-180
Cow position:
Alignm length: 182
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 153, 126

Conread position: 1-181
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 128

Conread position: 1-182
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-182
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 1-188
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-189
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 65, 83

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 186, 67

Conread position: 1-196
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 151, 21

Conread position: 1-200
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 68, 160

Conread position: 1-206
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 154

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 41

Conread position: 1-210
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 1-213
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 11

Conread position: 2-162
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 99

Conread position: 2-167
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 132, 69

Conread position: 2-167
Cow position:
Alignm length: 168
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 2-169
Cow position:
Alignm length: 171
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 149, 0

Conread position: 2-169
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 151, 112

Conread position: 2-172
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 20, 12

Conread position: 2-232
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 101

Conread position: 3-156
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 147, 53

Conread position: 3-162
Cow position:
Alignm length: 160
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-169
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 3-169
Cow position:
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 150, 80

Conread position: 3-171
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 150, 11

Conread position: 4-144
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 4-155
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 66, 125

Conread position: 4-155
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 4-167
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 5-149
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 142, 57

Conread position: 5-169
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 17, 9

Conread position: 6-167
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 147, 0

Conread position: 7-172
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 17

Conread position: 12-167
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 60

Conread position: 21-165
Cow position:
Alignm length: 146
Alignm identity: 119
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 132, 41

Conread position: 21-168
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 47

Conread position: 21-169
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 21-209
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 193

Conread position: 22-147
Cow position:
Alignm length: 126
Alignm identity: 94
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 22-169
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 131, 0

Conread position: 22-169
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 59, 0

Conread position: 22-174
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 132, 11

Conread position: 23-150
Cow position:
Alignm length: 128
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 54, 0

Conread position: 23-182
Cow position:
Alignm length: 160
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 26-168
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 28-154
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 56

Conread position: 28-167
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 60, 51

Conread position: 30-158
Cow position:
Alignm length: 129
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 33-166
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 38-183
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 119, 82

Conread position: 40-168
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 43-169
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 43-189
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 25

Conread position: 46-169
Cow position:
Alignm length: 125
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 62-167
Cow position:
Alignm length: 106
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Show alignments to all cow chromosomes.