Cow genome map

Conread name: rcbl0_008623.y1

Conread position: 1-125
Cow position: chr25:18568171-18568047 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-143
Cow position: chr25:36535374-36535233 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 1-146
Cow position: chr25:23323536-23323685 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 1-148
Cow position: chr25:26061681-26061534 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-151
Cow position: chr25:17919020-17919170 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 110

Conread position: 1-151
Cow position: chr25:18288723-18288577 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-151
Cow position: chr25:26087565-26087711 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 71

Conread position: 1-151
Cow position: chr25:35802617-35802470 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 118

Conread position: 1-152
Cow position: chr25:7403295-7403144 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chr25:8410988-8410839 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 1-152
Cow position: chr25:33311280-33311129 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-154
Cow position: chr25:21501000-21500846 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 99

Conread position: 1-155
Cow position: chr25:1838287-1838440 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 1-155
Cow position: chr25:7311350-7311197 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 142, 0

Conread position: 1-155
Cow position: chr25:11956850-11957001 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 1-155
Cow position: chr25:14945082-14944931 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 15

Conread position: 1-155
Cow position: chr25:17474467-17474315 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 1-155
Cow position: chr25:20008179-20008332 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 145, 82

Conread position: 1-155
Cow position: chr25:28945066-28945213 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-158
Cow position: chr25:14164241-14164398 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-158
Cow position: chr25:19679401-19679552 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 1-158
Cow position: chr25:32750121-32750276 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 131, 0

Conread position: 1-161
Cow position: chr25:21893384-21893537 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 1-164
Cow position: chr25:18551288-18551127 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 1-164
Cow position: chr25:22756655-22756817 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 147, 0

Conread position: 1-164
Cow position: chr25:30319408-30319242 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 1-165
Cow position: chr25:14225408-14225574 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 13

Conread position: 1-166
Cow position: chr25:26269671-26269506 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 23, 13

Conread position: 1-167
Cow position: chr25:5846763-5846594 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 1-167
Cow position: chr25:7185230-7185064 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-167
Cow position: chr25:13380555-13380390 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 13

Conread position: 1-167
Cow position: chr25:22154070-22154239 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 163

Conread position: 1-167
Cow position: chr25:28423191-28423358 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 152, 0

Conread position: 1-168
Cow position: chr25:7673347-7673513 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 76, 148

Conread position: 1-168
Cow position: chr25:22768264-22768428 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 21, 13

Conread position: 1-168
Cow position: chr25:31705270-31705436 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 0

Conread position: 1-168
Cow position: chr25:33686639-33686473 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 151, 0

Conread position: 1-169
Cow position: chr25:433002-432837 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 126, 0

Conread position: 1-169
Cow position: chr25:1982936-1982774 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 1-169
Cow position: chr25:12305322-12305490 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-169
Cow position: chr25:14457195-14457363 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-169
Cow position: chr25:17119788-17119956 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 153, 77

Conread position: 1-169
Cow position: chr25:18760662-18760500 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 1-169
Cow position: chr25:20487392-20487223 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 156, 0

Conread position: 1-169
Cow position: chr25:21547203-21547365 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 1-169
Cow position: chr25:26989243-26989414 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 1-169
Cow position: chr25:28662156-28662319 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 152, 61

Conread position: 1-169
Cow position: chr25:33101559-33101401 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 152, 61

Conread position: 1-170
Cow position: chr25:10407368-10407199 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 74

Conread position: 1-170
Cow position: chr25:23519986-23519825 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 1-171
Cow position: chr25:7726708-7726879 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 13

Conread position: 1-171
Cow position: chr25:16921751-16921580 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 1-172
Cow position: chr25:1763133-1763298 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 1-172
Cow position: chr25:33100621-33100786 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 128, 69

Conread position: 1-177
Cow position: chr25:20085623-20085796 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 1-179
Cow position: chr25:4192050-4192228 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-180
Cow position: chr25:5807991-5808167 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 156, 0

Conread position: 1-189
Cow position: chr25:31514227-31514415 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 13

Conread position: 1-190
Cow position: chr25:35052576-35052388 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 124, 171

Conread position: 1-191
Cow position: chr25:32745384-32745567 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-191
Cow position: chr25:35384290-35384100 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 152, 126

Conread position: 1-199
Cow position: chr25:22373444-22373244 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 13

Conread position: 1-205
Cow position: chr25:36020456-36020655 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 13

Conread position: 1-215
Cow position: chr25:26072515-26072305 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 179, 70

Conread position: 2-168
Cow position: chr25:40904783-40904618 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 146, 0

Conread position: 3-155
Cow position: chr25:2662443-2662591 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 10

Conread position: 3-155
Cow position: chr25:9002720-9002866 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 11

Conread position: 3-186
Cow position: chr25:9023799-9023974 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 165, 32

Conread position: 3-189
Cow position: chr25:11405846-11406030 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 11

Conread position: 4-139
Cow position: chr25:11855501-11855366 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-153
Cow position: chr25:17658658-17658807 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 17, 90

Conread position: 4-155
Cow position: chr25:18201880-18201732 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 4-192
Cow position: chr25:36369868-36370062 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 148, 13

Conread position: 4-192
Cow position: chr25:36375559-36375753 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 148, 13

Conread position: 5-155
Cow position: chr25:17724173-17724023 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-155
Cow position: chr25:33555656-33555805 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-177
Cow position: chr25:28940090-28939924 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 7-167
Cow position: chr25:22119605-22119447 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 137, 113

Conread position: 17-174
Cow position: chr25:37648843-37649000 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 136, 50

Conread position: 21-153
Cow position: chr25:6812169-6812032 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 21-164
Cow position: chr25:33272699-33272844 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 21-170
Cow position: chr25:22642330-22642485 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 22-155
Cow position: chr25:12092681-12092816 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 22-168
Cow position: chr25:19460140-19460286 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 22-189
Cow position: chr25:17725102-17725268 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 131, 13

Conread position: 23-155
Cow position: chr25:9494773-9494906 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 23-169
Cow position: chr25:12097901-12098049 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 26-161
Cow position: chr25:24651385-24651254 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 29-169
Cow position: chr25:12817724-12817863 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 42-201
Cow position: chr25:30462236-30462073 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 114, 84

Conread position: 47-166
Cow position: chr25:11096146-11096027 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.