Cow genome map
| Conread name: | rcbl0_008623.y1 |
| Conread position: | 1-143 |
| Cow position: | chr26:7085696-7085557 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-143 |
| Cow position: | chr26:9501773-9501913 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 1-145 |
| Cow position: | chr26:16801045-16801191 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 1-151 |
| Cow position: | chr26:12893362-12893218 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-152 |
| Cow position: | chr26:9662167-9662016 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 1-152 |
| Cow position: | chr26:31173334-31173485 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:4807619-4807773 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:5407044-5407195 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:6714237-6714083 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 1-155 |
| Cow position: | chr26:10974195-10974344 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 1-155 |
| Cow position: | chr26:16797902-16797751 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:21822980-21822832 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:25029598-25029752 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:25526314-25526462 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:27482501-27482347 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:31712003-31711849 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:33253251-33253101 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:34026972-34026818 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-157 |
| Cow position: | chr26:32981409-32981253 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 1-158 |
| Cow position: | chr26:10764277-10764433 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-158 |
| Cow position: | chr26:28444830-28444673 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-159 |
| Cow position: | chr26:16166630-16166473 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 153, 127 |
| Conread position: | 1-159 |
| Cow position: | chr26:25663487-25663329 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-166 |
| Cow position: | chr26:2930194-2930027 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-166 |
| Cow position: | chr26:12807235-12807078 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 152, 50 |
| Conread position: | 1-166 |
| Cow position: | chr26:23112099-23112267 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 1-167 |
| Cow position: | chr26:3930469-3930303 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-167 |
| Cow position: | chr26:11538597-11538763 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-167 |
| Cow position: | chr26:11968071-11967899 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 134, 88 |
| Conread position: | 1-167 |
| Cow position: | chr26:20260646-20260807 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-167 |
| Cow position: | chr26:25504525-25504691 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 59 |
| Conread position: | 1-167 |
| Cow position: | chr26:32834514-32834346 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-168 |
| Cow position: | chr26:8811192-8811363 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 1-168 |
| Cow position: | chr26:17212257-17212427 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-168 |
| Cow position: | chr26:18872674-18872842 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 1-168 |
| Cow position: | chr26:32830146-32830312 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-169 |
| Cow position: | chr26:4854610-4854773 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-169 |
| Cow position: | chr26:12992409-12992578 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-169 |
| Cow position: | chr26:19145964-19146133 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-169 |
| Cow position: | chr26:19459758-19459926 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 120, 61 |
| Conread position: | 1-169 |
| Cow position: | chr26:28243894-28244059 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-169 |
| Cow position: | chr26:34114327-34114494 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-170 |
| Cow position: | chr26:12028172-12028004 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 1-171 |
| Cow position: | chr26:35686458-35686627 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 126 |
| Conread position: | 1-173 |
| Cow position: | chr26:28202694-28202519 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 1-181 |
| Cow position: | chr26:7148240-7148060 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 54 |
| Conread position: | 1-182 |
| Cow position: | chr26:25737516-25737688 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 1-184 |
| Cow position: | chr26:10220163-10219979 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 1-189 |
| Cow position: | chr26:11672362-11672552 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 1-189 |
| Cow position: | chr26:23623979-23623796 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-189 |
| Cow position: | chr26:33202005-33201823 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-191 |
| Cow position: | chr26:1041064-1041253 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 1-191 |
| Cow position: | chr26:5749873-5749687 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 2-152 |
| Cow position: | chr26:4167287-4167137 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 2-155 |
| Cow position: | chr26:2701921-2701769 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 2-155 |
| Cow position: | chr26:33475760-33475915 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 2-166 |
| Cow position: | chr26:27768333-27768493 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 2-177 |
| Cow position: | chr26:8811537-8811712 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-157 |
| Cow position: | chr26:31633795-31633949 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-155 |
| Cow position: | chr26:4585145-4584996 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 4-168 |
| Cow position: | chr26:16550056-16550217 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 151, 114 |
| Conread position: | 4-169 |
| Cow position: | chr26:18679318-18679476 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 4-171 |
| Cow position: | chr26:1894312-1894151 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 97, 56 |
| Conread position: | 5-155 |
| Cow position: | chr26:35677910-35678064 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-159 |
| Cow position: | chr26:35530315-35530469 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 149, 36 |
| Conread position: | 5-168 |
| Cow position: | chr26:32842718-32842556 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 7-151 |
| Cow position: | chr26:19671547-19671689 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 13-163 |
| Cow position: | chr26:23097118-23096967 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 21-169 |
| Cow position: | chr26:586795-586644 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 143 |
| Conread position: | 22-176 |
| Cow position: | chr26:21418371-21418215 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 25-169 |
| Cow position: | chr26:26919622-26919768 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 26-186 |
| Cow position: | chr26:10740162-10739991 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 29-169 |
| Cow position: | chr26:31145466-31145601 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 30-155 |
| Cow position: | chr26:16423686-16423809 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 38-155 |
| Cow position: | chr26:15908662-15908545 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-167 |
| Cow position: | chr26:6741643-6741519 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-179 |
| Cow position: | chr26:31205199-31205327 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.