Cow genome map

Conread name: rcbl0_008623.y1

Conread position: 1-123
Cow position: chr29:27042318-27042442 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 1-127
Cow position: chr29:38582014-38582140 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 13

Conread position: 1-144
Cow position: chr29:21443292-21443154 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 1-150
Cow position: chr29:22534007-22534156 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chr29:30294827-30294676 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-153
Cow position: chr29:16438733-16438576 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 1-155
Cow position: chr29:16609794-16609948 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 103

Conread position: 1-155
Cow position: chr29:23874506-23874660 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr29:38754891-38754740 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 1-155
Cow position: chr29:41094163-41094314 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 12

Conread position: 1-156
Cow position: chr29:36357172-36357327 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-157
Cow position: chr29:8163783-8163627 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 71

Conread position: 1-158
Cow position: chr29:5520439-5520283 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 1-158
Cow position: chr29:33321393-33321550 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 13

Conread position: 1-162
Cow position: chr29:17297182-17297343 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-162
Cow position: chr29:24188019-24187858 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-162
Cow position: chr29:30227235-30227075 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 1-162
Cow position: chr29:35084176-35084018 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 1-163
Cow position: chr29:15947213-15947375 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-164
Cow position: chr29:4484142-4484305 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 149, 80

Conread position: 1-164
Cow position: chr29:23735042-23734879 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-164
Cow position: chr29:38858167-38858005 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 80, 54

Conread position: 1-164
Cow position: chr29:42404993-42405156 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position: chr29:3292994-3293151 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 1-165
Cow position: chr29:11081350-11081186 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-166
Cow position: chr29:22690271-22690435 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 159, 0

Conread position: 1-167
Cow position: chr29:5046699-5046862 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 127

Conread position: 1-167
Cow position: chr29:5953813-5953647 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 160

Conread position: 1-167
Cow position: chr29:7955944-7955778 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 23

Conread position: 1-167
Cow position: chr29:17222459-17222627 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 106

Conread position: 1-167
Cow position: chr29:22019141-22018976 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 142, 61

Conread position: 1-167
Cow position: chr29:24604942-24605106 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 82, 0

Conread position: 1-167
Cow position: chr29:31489365-31489534 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 1-168
Cow position: chr29:11894744-11894909 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 156, 0

Conread position: 1-168
Cow position: chr29:20685215-20685381 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 159, 0

Conread position: 1-169
Cow position: chr29:396452-396613 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 12

Conread position: 1-169
Cow position: chr29:4441158-4440994 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 1-169
Cow position: chr29:9709741-9709905 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-169
Cow position: chr29:9800696-9800871 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 13

Conread position: 1-169
Cow position: chr29:14576905-14577070 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 152, 60

Conread position: 1-169
Cow position: chr29:18450092-18449925 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 152, 70

Conread position: 1-169
Cow position: chr29:19949353-19949517 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-169
Cow position: chr29:20626613-20626782 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 1-169
Cow position: chr29:22068694-22068529 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 1-169
Cow position: chr29:23142288-23142120 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-169
Cow position: chr29:24292914-24293083 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 71

Conread position: 1-169
Cow position: chr29:31929035-31929199 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 145, 12

Conread position: 1-170
Cow position: chr29:17110003-17110167 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 157, 69

Conread position: 1-170
Cow position: chr29:21196603-21196440 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 1-172
Cow position: chr29:32656479-32656655 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 1-173
Cow position: chr29:16200432-16200257 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 152, 0

Conread position: 1-179
Cow position: chr29:35189653-35189835 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 70

Conread position: 1-179
Cow position: chr29:35259031-35259206 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 152, 61

Conread position: 1-180
Cow position: chr29:34745612-34745438 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 29

Conread position: 1-182
Cow position: chr29:16290772-16290944 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 13

Conread position: 1-182
Cow position: chr29:41530896-41531077 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 173, 50

Conread position: 1-183
Cow position: chr29:4648163-4647986 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 1-183
Cow position: chr29:26017456-26017276 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 160, 0

Conread position: 1-183
Cow position: chr29:34675963-34675777 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 104

Conread position: 1-184
Cow position: chr29:20167470-20167651 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 118

Conread position: 1-186
Cow position: chr29:11685213-11685394 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 156, 0

Conread position: 1-186
Cow position: chr29:16735270-16735452 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 156, 0

Conread position: 1-187
Cow position: chr29:29057221-29057412 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 126, 67

Conread position: 1-189
Cow position: chr29:4120900-4121088 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 69

Conread position: 1-194
Cow position: chr29:30440983-30441175 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 34

Conread position: 1-208
Cow position: chr29:18878435-18878236 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 1-213
Cow position: chr29:35677497-35677280 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 150, 0

Conread position: 2-155
Cow position: chr29:14375834-14375681 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-155
Cow position: chr29:22577132-22576980 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 2-169
Cow position: chr29:5409094-5408930 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 2-169
Cow position: chr29:26211099-26211268 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 149, 58

Conread position: 2-169
Cow position: chr29:28420802-28420967 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 155, 0

Conread position: 2-172
Cow position: chr29:31786722-31786890 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 151, 110

Conread position: 2-173
Cow position: chr29:25907293-25907468 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 90

Conread position: 2-208
Cow position: chr29:35458725-35458515 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 3-152
Cow position: chr29:23819342-23819189 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 3-155
Cow position: chr29:37618354-37618506 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 11

Conread position: 3-158
Cow position: chr29:10994560-10994712 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 3-167
Cow position: chr29:38732201-38732364 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 154, 0

Conread position: 4-141
Cow position: chr29:24365848-24365713 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 4-168
Cow position: chr29:24119451-24119284 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 147, 0

Conread position: 4-190
Cow position: chr29:32656041-32655860 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 142, 64

Conread position: 7-159
Cow position: chr29:44901610-44901459 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 45

Conread position: 16-162
Cow position: chr29:23209386-23209535 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 21-165
Cow position: chr29:4603075-4602922 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 149

Conread position: 21-169
Cow position: chr29:20643981-20644129 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 112

Conread position: 22-132
Cow position: chr29:8669421-8669530 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 22-176
Cow position: chr29:685111-684956 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 137, 34

Conread position: 23-155
Cow position: chr29:14746848-14746976 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 23-166
Cow position: chr29:22720575-22720437 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 132, 39

Conread position: 23-167
Cow position: chr29:18577514-18577650 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 23-168
Cow position: chr29:16164368-16164221 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 23-169
Cow position: chr29:26777076-26777225 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 23-170
Cow position: chr29:8841377-8841237 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 26-159
Cow position: chr29:35281535-35281674 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 26-163
Cow position: chr29:6515503-6515639 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 26-179
Cow position: chr29:4741320-4741167 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 128, 136

Conread position: 33-167
Cow position: chr29:44937921-44937783 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 33-169
Cow position: chr29:34483549-34483410 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 35-177
Cow position: chr29:3711454-3711598 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 35-188
Cow position: chr29:6716434-6716281 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 36-179
Cow position: chr29:9924499-9924350 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 43-168
Cow position: chr29:41844164-41844039 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 44-183
Cow position: chr29:34832309-34832170 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 120

Conread position: 66-199
Cow position: chr29:7395697-7395562 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.