Cow genome map
| Conread name: | rcbl0_008623.y1 |
| Conread position: | 1-141 |
| Cow position: | chr9:33542036-33541896 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-144 |
| Cow position: | chr9:14357396-14357253 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-144 |
| Cow position: | chr9:37955190-37955333 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 1-147 |
| Cow position: | chr9:9753410-9753564 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 50 |
| Conread position: | 1-147 |
| Cow position: | chr9:54986174-54986323 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-149 |
| Cow position: | chr9:5110839-5110692 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1-150 |
| Cow position: | chr9:9723895-9724044 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 1-150 |
| Cow position: | chr9:63784933-63785074 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-151 |
| Cow position: | chr9:5772696-5772846 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-151 |
| Cow position: | chr9:41282996-41282846 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 73 |
| Conread position: | 1-152 |
| Cow position: | chr9:13993746-13993596 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-152 |
| Cow position: | chr9:63185714-63185864 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1-154 |
| Cow position: | chr9:5342266-5342415 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-155 |
| Cow position: | chr9:2397788-2397640 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-155 |
| Cow position: | chr9:5068822-5068667 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-155 |
| Cow position: | chr9:9311839-9311689 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-155 |
| Cow position: | chr9:11447827-11447977 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-155 |
| Cow position: | chr9:15805942-15806096 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr9:27261409-27261563 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 74 |
| Conread position: | 1-155 |
| Cow position: | chr9:27279290-27279136 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr9:31359585-31359434 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 142, 78 |
| Conread position: | 1-155 |
| Cow position: | chr9:41644769-41644923 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr9:53323803-53323958 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 1-155 |
| Cow position: | chr9:53631942-53632096 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-157 |
| Cow position: | chr9:15215706-15215862 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-157 |
| Cow position: | chr9:17769299-17769149 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-157 |
| Cow position: | chr9:34423602-34423446 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-158 |
| Cow position: | chr9:27345603-27345762 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 84, 54 |
| Conread position: | 1-160 |
| Cow position: | chr9:20942635-20942794 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-160 |
| Cow position: | chr9:47214564-47214725 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 72 |
| Conread position: | 1-162 |
| Cow position: | chr9:40603649-40603490 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-164 |
| Cow position: | chr9:1729693-1729865 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 106, 161 |
| Conread position: | 1-164 |
| Cow position: | chr9:35932833-35932993 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 1-165 |
| Cow position: | chr9:25583811-25583651 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-165 |
| Cow position: | chr9:39709838-39709673 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-165 |
| Cow position: | chr9:44396643-44396479 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-166 |
| Cow position: | chr9:1984499-1984665 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 1-167 |
| Cow position: | chr9:19656995-19657156 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-167 |
| Cow position: | chr9:20406633-20406473 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-167 |
| Cow position: | chr9:32348833-32349006 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-167 |
| Cow position: | chr9:34286780-34286616 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-168 |
| Cow position: | chr9:1403553-1403718 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 1-168 |
| Cow position: | chr9:6397803-6397969 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-168 |
| Cow position: | chr9:9432044-9431877 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 158, 105 |
| Conread position: | 1-168 |
| Cow position: | chr9:20017379-20017212 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 152, 81 |
| Conread position: | 1-168 |
| Cow position: | chr9:34760383-34760552 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 159, 74 |
| Conread position: | 1-168 |
| Cow position: | chr9:37950916-37951083 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 1-168 |
| Cow position: | chr9:46981246-46981404 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1-168 |
| Cow position: | chr9:47517180-47517014 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 1-168 |
| Cow position: | chr9:53061643-53061470 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:8645247-8645081 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:12786492-12786660 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:16811673-16811845 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 126, 97 |
| Conread position: | 1-169 |
| Cow position: | chr9:19034338-19034170 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:28315410-28315240 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:28747539-28747702 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:30665007-30665185 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:32669966-32670130 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:34410415-34410578 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 152, 71 |
| Conread position: | 1-169 |
| Cow position: | chr9:35028184-35028349 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:35295671-35295509 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 150, 77 |
| Conread position: | 1-169 |
| Cow position: | chr9:36410367-36410533 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:37934255-37934424 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:43680101-43679937 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:47510589-47510755 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 152, 29 |
| Conread position: | 1-169 |
| Cow position: | chr9:51566514-51566682 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:53139151-53139320 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:61019381-61019549 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-170 |
| Cow position: | chr9:26477197-26477027 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-171 |
| Cow position: | chr9:14738230-14738068 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-172 |
| Cow position: | chr9:52511100-52510927 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-176 |
| Cow position: | chr9:14974938-14975120 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 1-179 |
| Cow position: | chr9:20828887-20828712 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1-179 |
| Cow position: | chr9:25375755-25375928 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 150, 6 |
| Conread position: | 1-179 |
| Cow position: | chr9:26715236-26715057 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 75, 16 |
| Conread position: | 1-179 |
| Cow position: | chr9:34697318-34697497 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 1-179 |
| Cow position: | chr9:35832638-35832810 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 152, 55 |
| Conread position: | 1-185 |
| Cow position: | chr9:17785585-17785772 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 1-186 |
| Cow position: | chr9:27495218-27495031 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 1-189 |
| Cow position: | chr9:18817729-18817920 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 1-190 |
| Cow position: | chr9:52754869-52755054 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-193 |
| Cow position: | chr9:8573374-8573177 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 42, 126 |
| Conread position: | 1-195 |
| Cow position: | chr9:35466541-35466739 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 152 |
| Conread position: | 1-196 |
| Cow position: | chr9:18425893-18425693 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 1-198 |
| Cow position: | chr9:45711019-45711219 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 1-204 |
| Cow position: | chr9:26279188-26279387 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 120, 157 |
| Conread position: | 1-205 |
| Cow position: | chr9:30402444-30402645 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 149 |
| Conread position: | 1-236 |
| Cow position: | chr9:9091124-9091358 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 149, 172 |
| Conread position: | 1-239 |
| Cow position: | chr9:13670614-13670379 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 164, 58 |
| Conread position: | 2-141 |
| Cow position: | chr9:31513952-31514091 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-143 |
| Cow position: | chr9:28342671-28342813 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 2-155 |
| Cow position: | chr9:8468037-8467889 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-155 |
| Cow position: | chr9:12280951-12280803 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 2-157 |
| Cow position: | chr9:8537288-8537134 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-159 |
| Cow position: | chr9:44822344-44822497 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 152, 76 |
| Conread position: | 2-165 |
| Cow position: | chr9:24000777-24000934 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 2-166 |
| Cow position: | chr9:54598653-54598492 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 2-167 |
| Cow position: | chr9:34196174-34196012 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 2-167 |
| Cow position: | chr9:44758950-44759109 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 2-167 |
| Cow position: | chr9:48046519-48046352 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-167 |
| Cow position: | chr9:50648047-50647889 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 114, 79 |
| Conread position: | 2-168 |
| Cow position: | chr9:62136134-62136300 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-169 |
| Cow position: | chr9:13743950-13744117 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 159 |
| Conread position: | 2-171 |
| Cow position: | chr9:34276230-34276400 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 2-192 |
| Cow position: | chr9:22408737-22408545 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 149, 69 |
| Conread position: | 3-146 |
| Cow position: | chr9:18215931-18216073 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 3-155 |
| Cow position: | chr9:3573445-3573294 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-155 |
| Cow position: | chr9:36457978-36457826 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 69, 73 |
| Conread position: | 3-169 |
| Cow position: | chr9:41470119-41470284 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 3-169 |
| Cow position: | chr9:44527097-44526922 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 3-171 |
| Cow position: | chr9:31344628-31344797 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 3-185 |
| Cow position: | chr9:6954270-6954451 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 159 |
| Conread position: | 4-129 |
| Cow position: | chr9:46930437-46930315 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 4-139 |
| Cow position: | chr9:58440397-58440533 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 105 |
| Conread position: | 4-153 |
| Cow position: | chr9:63169950-63169801 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 4-155 |
| Cow position: | chr9:20355845-20355698 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 4-155 |
| Cow position: | chr9:50977275-50977426 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-159 |
| Cow position: | chr9:151847-151691 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 4-165 |
| Cow position: | chr9:16826217-16826384 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 4-167 |
| Cow position: | chr9:11506275-11506117 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 4-169 |
| Cow position: | chr9:8613234-8613397 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 4-191 |
| Cow position: | chr9:16216957-16216777 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 5-162 |
| Cow position: | chr9:13722161-13722318 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-168 |
| Cow position: | chr9:44709806-44709650 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 5-169 |
| Cow position: | chr9:42062076-42061904 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 6-155 |
| Cow position: | chr9:35049456-35049310 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 113, 54 |
| Conread position: | 6-177 |
| Cow position: | chr9:31626110-31625938 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 7-165 |
| Cow position: | chr9:61286737-61286581 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 8-189 |
| Cow position: | chr9:26057456-26057632 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 11-157 |
| Cow position: | chr9:29091745-29091598 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 12-155 |
| Cow position: | chr9:20755784-20755929 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 16-170 |
| Cow position: | chr9:34399637-34399485 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 17-169 |
| Cow position: | chr9:59172975-59173126 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 17-177 |
| Cow position: | chr9:26578236-26578402 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 17-210 |
| Cow position: | chr9:31216045-31215861 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 19-162 |
| Cow position: | chr9:14956983-14956840 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 127, 92 |
| Conread position: | 21-122 |
| Cow position: | chr9:35360328-35360429 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-142 |
| Cow position: | chr9:53124050-53123929 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-162 |
| Cow position: | chr9:43345699-43345558 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-164 |
| Cow position: | chr9:34355816-34355955 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 21-166 |
| Cow position: | chr9:48367565-48367711 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 21-168 |
| Cow position: | chr9:2985032-2984883 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 21-210 |
| Cow position: | chr9:45170420-45170606 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 22-143 |
| Cow position: | chr9:10010775-10010654 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-162 |
| Cow position: | chr9:48343935-48344075 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-172 |
| Cow position: | chr9:52130975-52130827 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 23-164 |
| Cow position: | chr9:12495176-12495033 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 23-181 |
| Cow position: | chr9:35905041-35905193 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 24-174 |
| Cow position: | chr9:48017806-48017956 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-162 |
| Cow position: | chr9:17906584-17906719 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 26-155 |
| Cow position: | chr9:34279099-34279229 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 26-169 |
| Cow position: | chr9:32019368-32019513 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 28-169 |
| Cow position: | chr9:6727004-6726864 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 115 |
| Conread position: | 30-169 |
| Cow position: | chr9:62859635-62859497 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 33-169 |
| Cow position: | chr9:63711110-63710972 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 33-179 |
| Cow position: | chr9:5399415-5399267 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 43-151 |
| Cow position: | chr9:38370416-38370310 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 43-162 |
| Cow position: | chr9:58232382-58232501 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-165 |
| Cow position: | chr9:34964796-34964915 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 110, 39 |
| Conread position: | 43-168 |
| Cow position: | chr9:28866151-28866276 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-169 |
| Cow position: | chr9:52651550-52651677 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 43-178 |
| Cow position: | chr9:9582767-9582632 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-170 |
| Cow position: | chr9:28156637-28156515 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-164 |
| Cow position: | chr9:35491365-35491251 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 62-191 |
| Cow position: | chr9:48809069-48808942 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 123, 40 |
Show alignments to all cow chromosomes.