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Cow genome map

           
Conread name:
           
rcbl0_009068.y1
        

               
Conread position:
               
7-163
               

               
Cow position:
               
chr13:13954310-13954472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
7-183
               

               
Cow position:
               
chr13:18243942-18243763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
7-206
               

               
Cow position:
               
chr13:8524535-8524745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
7-231
               

               
Cow position:
               
chr13:24230290-24230068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr13:25547505-25547781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
7-292
               

               
Cow position:
               
chr13:24715324-24715030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 244
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr13:28689549-28689257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 240
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr13:29831356-29831648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr13:43595028-43595331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr13:867208-866900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
8-244
               

               
Cow position:
               
chr13:19778769-19779014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
8-244
               

               
Cow position:
               
chr13:28552672-28552427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
41, 188
               

               
Conread position:
               
8-290
               

               
Cow position:
               
chr13:1569003-1568717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
8-310
               

               
Cow position:
               
chr13:14063439-14063757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 232
               

               
Conread position:
               
9-291
               

               
Cow position:
               
chr13:34995247-34995530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
10-231
               

               
Cow position:
               
chr13:2774205-2773980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
10-299
               

               
Cow position:
               
chr13:19240513-19240213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
42, 171
               

               
Conread position:
               
10-313
               

               
Cow position:
               
chr13:13501544-13501851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
11-212
               

               
Cow position:
               
chr13:28683439-28683234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr13:4420421-4420183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
11-283
               

               
Cow position:
               
chr13:59687804-59688073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
11-290
               

               
Cow position:
               
chr13:18058169-18058464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 193
               

               
Conread position:
               
11-291
               

               
Cow position:
               
chr13:6079342-6079621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
11-293
               

               
Cow position:
               
chr13:8374695-8374981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 142
               

               
Conread position:
               
11-298
               

               
Cow position:
               
chr13:23512443-23512156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
11-304
               

               
Cow position:
               
chr13:32283201-32282895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
12-298
               

               
Cow position:
               
chr13:25496081-25495784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
13-243
               

               
Cow position:
               
chr13:15991157-15991389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
16-293
               

               
Cow position:
               
chr13:44278423-44278126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 167
               

               
Conread position:
               
16-325
               

               
Cow position:
               
chr13:20271156-20271481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
17-150
               

               
Cow position:
               
chr13:20128735-20128600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
17-179
               

               
Cow position:
               
chr13:16187826-16187991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
17-200
               

               
Cow position:
               
chr13:17622352-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
17-203
               

               
Cow position:
               
chr13:6060939-6061127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr13:20563066-20562873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr13:56678086-56677895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 137
               

               
Conread position:
               
17-206
               

               
Cow position:
               
chr13:18989785-18989601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
17-208
               

               
Cow position:
               
chr13:8652368-8652567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-210
               

               
Cow position:
               
chr13:11061056-11060861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
17-210
               

               
Cow position:
               
chr13:55727971-55727776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr13:12546840-12547036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr13:12614326-12614125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr13:17110291-17110099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr13:23270141-23270333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr13:26369596-26369396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr13:40722637-40722835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr13:45725966-45725758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr13:51901663-51901456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr13:60430004-60430206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr13:60974153-60973952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 123
               

               
Conread position:
               
17-213
               

               
Cow position:
               
chr13:49520751-49520951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
17-214
               

               
Cow position:
               
chr13:7663353-7663551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
17-215
               

               
Cow position:
               
chr13:9593579-9593375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 180
               

               
Conread position:
               
17-221
               

               
Cow position:
               
chr13:59170722-59170517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
17-222
               

               
Cow position:
               
chr13:46736283-46736077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
17-228
               

               
Cow position:
               
chr13:2414099-2413887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
28, 148
               

               
Conread position:
               
17-229
               

               
Cow position:
               
chr13:61990266-61990469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr13:7076328-7076111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr13:5006063-5005853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr13:9900219-9900010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr13:14771526-14771305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr13:17439699-17439915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr13:38872881-38873091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr13:43869042-43869259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 189
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr13:53330342-53330123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
17-242
               

               
Cow position:
               
chr13:18929598-18929368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
17-243
               

               
Cow position:
               
chr13:20137895-20137659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-258
               

               
Cow position:
               
chr13:827313-827070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
17-260
               

               
Cow position:
               
chr13:1042895-1043137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 175
               

               
Conread position:
               
17-275
               

               
Cow position:
               
chr13:12207114-12206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
17-280
               

               
Cow position:
               
chr13:19279167-19278888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
17-283
               

               
Cow position:
               
chr13:4664795-4665060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
17-286
               

               
Cow position:
               
chr13:5758270-5758545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 233
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr13:10989005-10989288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr13:9975005-9975283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 229
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr13:11321545-11321815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 205
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr13:15192819-15193103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr13:16038222-16038498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
17-289
               

               
Cow position:
               
chr13:20839634-20839364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
17-289
               

               
Cow position:
               
chr13:37981674-37981944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
17-289
               

               
Cow position:
               
chr13:46516131-46515843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
17-290
               

               
Cow position:
               
chr13:15195139-15195418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
17-290
               

               
Cow position:
               
chr13:25695700-25695984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
17-291
               

               
Cow position:
               
chr13:41806846-41806558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
17-292
               

               
Cow position:
               
chr13:6974231-6973943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 177
               

               
Conread position:
               
17-293
               

               
Cow position:
               
chr13:14576277-14575994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr13:17158804-17159103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr13:18166804-18166511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
17-296
               

               
Cow position:
               
chr13:52055523-52055816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
17-297
               

               
Cow position:
               
chr13:21235615-21235892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr13:12448924-12449206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr13:12875902-12876202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr13:20473611-20473900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
28, 232
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr13:34281747-34281456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr13:52894212-52893923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
17-301
               

               
Cow position:
               
chr13:17498288-17497989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
17-301
               

               
Cow position:
               
chr13:19882965-19883262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
17-301
               

               
Cow position:
               
chr13:26480142-26480431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
17-301
               

               
Cow position:
               
chr13:54094884-54094599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
40, 179
               

               
Conread position:
               
17-303
               

               
Cow position:
               
chr13:15869193-15868879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-303
               

               
Cow position:
               
chr13:25537697-25537407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
28, 224
               

               
Conread position:
               
17-304
               

               
Cow position:
               
chr13:311501-311202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
17-304
               

               
Cow position:
               
chr13:49796087-49795807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
17-304
               

               
Cow position:
               
chr13:52749408-52749694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
17-304
               

               
Cow position:
               
chr13:56034788-56035088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
17-305
               

               
Cow position:
               
chr13:9587518-9587815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
17-308
               

               
Cow position:
               
chr13:51940807-51940508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
28, 241
               

               
Conread position:
               
17-313
               

               
Cow position:
               
chr13:55583264-55582954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
31, 159
               

               
Conread position:
               
18-194
               

               
Cow position:
               
chr13:9643818-9643997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
18-212
               

               
Cow position:
               
chr13:43762239-43762041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
18-228
               

               
Cow position:
               
chr13:185601-185386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
18-231
               

               
Cow position:
               
chr13:36771350-36771568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
18-233
               

               
Cow position:
               
chr13:3989273-3989055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 150
               

               
Conread position:
               
18-241
               

               
Cow position:
               
chr13:46181861-46181640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 182
               

               
Conread position:
               
18-243
               

               
Cow position:
               
chr13:43184802-43185042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
27, 193
               

               
Conread position:
               
18-244
               

               
Cow position:
               
chr13:9265763-9265986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
18-244
               

               
Cow position:
               
chr13:18995197-18994963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 126
               

               
Conread position:
               
18-244
               

               
Cow position:
               
chr13:37069419-37069182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
18-244
               

               
Cow position:
               
chr13:46112036-46111809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
18-274
               

               
Cow position:
               
chr13:50750984-50751253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
18-280
               

               
Cow position:
               
chr13:46044229-46043967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 183
               

               
Conread position:
               
18-287
               

               
Cow position:
               
chr13:21288016-21288299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
18-289
               

               
Cow position:
               
chr13:25435050-25435322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 207
               

               
Conread position:
               
18-292
               

               
Cow position:
               
chr13:42672352-42672650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
18-295
               

               
Cow position:
               
chr13:25926860-25926566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
18-296
               

               
Cow position:
               
chr13:21275927-21275633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
18-301
               

               
Cow position:
               
chr13:6616682-6616992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
18-304
               

               
Cow position:
               
chr13:22085674-22085962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 193
               

               
Conread position:
               
18-304
               

               
Cow position:
               
chr13:24753950-24753661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 28
               

               
Conread position:
               
18-312
               

               
Cow position:
               
chr13:15194662-15194961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 210
               

               
Conread position:
               
18-313
               

               
Cow position:
               
chr13:19188370-19188076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
27, 193
               

               
Conread position:
               
18-316
               

               
Cow position:
               
chr13:4158733-4158415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 257
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr13:51115953-51116171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
19-286
               

               
Cow position:
               
chr13:20174817-20174524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr13:17745314-17745040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
19-292
               

               
Cow position:
               
chr13:42114087-42113795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
19-293
               

               
Cow position:
               
chr13:10924844-10925144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
19-293
               

               
Cow position:
               
chr13:55162280-55161989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr13:34261299-34261013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
19-296
               

               
Cow position:
               
chr13:13320863-13320574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
19-304
               

               
Cow position:
               
chr13:10845664-10845387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
19-305
               

               
Cow position:
               
chr13:19582018-19582314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
20-211
               

               
Cow position:
               
chr13:13765853-13765663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
20-226
               

               
Cow position:
               
chr13:17563804-17563598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
20-229
               

               
Cow position:
               
chr13:3211619-3211405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
25, 210
               

               
Conread position:
               
20-232
               

               
Cow position:
               
chr13:39368027-39367806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
20-234
               

               
Cow position:
               
chr13:15281872-15282086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
20-244
               

               
Cow position:
               
chr13:11260338-11260118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
20-245
               

               
Cow position:
               
chr13:37521676-37521906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
20-280
               

               
Cow position:
               
chr13:20784662-20784387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
20-289
               

               
Cow position:
               
chr13:42200687-42200404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
20-292
               

               
Cow position:
               
chr13:9800579-9800301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 101
               

               
Conread position:
               
20-294
               

               
Cow position:
               
chr13:10221019-10220735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
20-304
               

               
Cow position:
               
chr13:49022800-49023096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
20-307
               

               
Cow position:
               
chr13:20879759-20880060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
20-308
               

               
Cow position:
               
chr13:20360344-20360040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
21-231
               

               
Cow position:
               
chr13:21283635-21283851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
21-244
               

               
Cow position:
               
chr13:15288856-15289078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
25-212
               

               
Cow position:
               
chr13:20649921-20650110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 175
               

               
Conread position:
               
25-243
               

               
Cow position:
               
chr13:34728779-34729001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
25-292
               

               
Cow position:
               
chr13:62008175-62007888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
25-295
               

               
Cow position:
               
chr13:17822888-17823171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
25-298
               

               
Cow position:
               
chr13:54128530-54128824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
15, 174
               

               
Conread position:
               
25-304
               

               
Cow position:
               
chr13:25579125-25579422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
26-212
               

               
Cow position:
               
chr13:56148585-56148393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
26-212
               

               
Cow position:
               
chr13:56160382-56160574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
26-222
               

               
Cow position:
               
chr13:8609487-8609685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr13:17838011-17837806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
26-244
               

               
Cow position:
               
chr13:18999602-18999372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
26-292
               

               
Cow position:
               
chr13:2803534-2803267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 206
               

               
Conread position:
               
27-293
               

               
Cow position:
               
chr13:12673238-12673508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
28-293
               

               
Cow position:
               
chr13:52459423-52459694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
29-212
               

               
Cow position:
               
chr13:25428169-25428351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
29-245
               

               
Cow position:
               
chr13:37503522-37503746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
29-293
               

               
Cow position:
               
chr13:3315619-3315906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
29-293
               

               
Cow position:
               
chr13:44202059-44201789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
29-296
               

               
Cow position:
               
chr13:21170588-21170305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
32-168
               

               
Cow position:
               
chr13:61166395-61166534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
32-193
               

               
Cow position:
               
chr13:8369213-8369053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
32-212
               

               
Cow position:
               
chr13:11643997-11643811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
32-231
               

               
Cow position:
               
chr13:37640639-37640443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
32-231
               

               
Cow position:
               
chr13:41157457-41157258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
32-244
               

               
Cow position:
               
chr13:152016-151806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr13:12925829-12925583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
32-288
               

               
Cow position:
               
chr13:45073862-45074118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
35-211
               

               
Cow position:
               
chr13:37946897-37947078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
35-212
               

               
Cow position:
               
chr13:9142337-9142153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
17, 131
               

               
Conread position:
               
35-243
               

               
Cow position:
               
chr13:1147098-1147309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
35-244
               

               
Cow position:
               
chr13:23479084-23478869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
35-293
               

               
Cow position:
               
chr13:19393347-19393076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 203
               

               
Conread position:
               
35-296
               

               
Cow position:
               
chr13:25561656-25561407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
35-298
               

               
Cow position:
               
chr13:17089470-17089738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
35-305
               

               
Cow position:
               
chr13:15162599-15162871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
36-192
               

               
Cow position:
               
chr13:8201431-8201591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
36-243
               

               
Cow position:
               
chr13:17350405-17350196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
36-307
               

               
Cow position:
               
chr13:16020904-16020625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
37-212
               

               
Cow position:
               
chr13:20231144-20231318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
37-212
               

               
Cow position:
               
chr13:23856263-23856083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
37-323
               

               
Cow position:
               
chr13:21866580-21866879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
38-287
               

               
Cow position:
               
chr13:52640900-52641165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
38-306
               

               
Cow position:
               
chr13:15349205-15349479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
40-213
               

               
Cow position:
               
chr13:43829291-43829115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
40-216
               

               
Cow position:
               
chr13:53788059-53788240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
40-231
               

               
Cow position:
               
chr13:37381848-37381656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 172
               

               
Conread position:
               
40-231
               

               
Cow position:
               
chr13:43893277-43893469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
40-231
               

               
Cow position:
               
chr13:43919215-43919407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
35, 177
               

               
Conread position:
               
40-245
               

               
Cow position:
               
chr13:59461282-59461086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
40-286
               

               
Cow position:
               
chr13:37592897-37593159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
40-289
               

               
Cow position:
               
chr13:7149466-7149715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
40-297
               

               
Cow position:
               
chr13:8362701-8362972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
41-212
               

               
Cow position:
               
chr13:16014859-16014683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
41-244
               

               
Cow position:
               
chr13:60509074-60509283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
41-287
               

               
Cow position:
               
chr13:8233041-8232804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
42-225
               

               
Cow position:
               
chr13:38278103-38278290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
6, 104
               

               
Conread position:
               
46-221
               

               
Cow position:
               
chr13:51856845-51857024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
46-222
               

               
Cow position:
               
chr13:6342047-6342226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
46-244
               

               
Cow position:
               
chr13:20288695-20288489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 171
               

               
Conread position:
               
46-291
               

               
Cow position:
               
chr13:43139173-43139418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 163
               

               
Conread position:
               
46-298
               

               
Cow position:
               
chr13:584831-585100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
46-298
               

               
Cow position:
               
chr13:5263244-5263504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
46-298
               

               
Cow position:
               
chr13:8660088-8659849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
49-298
               

               
Cow position:
               
chr13:28439446-28439191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
51-226
               

               
Cow position:
               
chr13:9117534-9117707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
51-306
               

               
Cow position:
               
chr13:38035872-38035606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
51-307
               

               
Cow position:
               
chr13:34873627-34873351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
53-210
               

               
Cow position:
               
chr13:4588902-4588739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
53-244
               

               
Cow position:
               
chr13:55081175-55080980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
31, 141
               

               
Conread position:
               
53-301
               

               
Cow position:
               
chr13:40491251-40490989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
54-244
               

               
Cow position:
               
chr13:8667652-8667456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
6, 77
               

               
Conread position:
               
54-292
               

               
Cow position:
               
chr13:40541073-40541329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
55-204
               

               
Cow position:
               
chr13:3125826-3125681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
55-301
               

               
Cow position:
               
chr13:33601198-33601457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
56-231
               

               
Cow position:
               
chr13:51821849-51822021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
59-207
               

               
Cow position:
               
chr13:32657771-32657923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
59-231
               

               
Cow position:
               
chr13:17977375-17977207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
59-296
               

               
Cow position:
               
chr13:15069982-15069748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
218, 21
               

               
Conread position:
               
59-311
               

               
Cow position:
               
chr13:37775179-37775445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
60-305
               

               
Cow position:
               
chr13:28071896-28071645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
61-289
               

               
Cow position:
               
chr13:52536589-52536354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 186
               

               
Conread position:
               
62-305
               

               
Cow position:
               
chr13:57985915-57986161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
63-204
               

               
Cow position:
               
chr13:18517068-18516926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
63-239
               

               
Cow position:
               
chr13:2404774-2404601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
66-294
               

               
Cow position:
               
chr13:17813489-17813250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
67-192
               

               
Cow position:
               
chr13:15739707-15739585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
67-243
               

               
Cow position:
               
chr13:18340551-18340373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
69-213
               

               
Cow position:
               
chr13:36666259-36666403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
69-280
               

               
Cow position:
               
chr13:2776305-2776077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
69-291
               

               
Cow position:
               
chr13:52934445-52934208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 131
               

               
Conread position:
               
70-208
               

               
Cow position:
               
chr13:51227722-51227865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
70-231
               

               
Cow position:
               
chr13:42640398-42640239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
70-272
               

               
Cow position:
               
chr13:6465674-6465882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
70-286
               

               
Cow position:
               
chr13:50457874-50457638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
70-292
               

               
Cow position:
               
chr13:55765162-55765395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 128
               

               
Conread position:
               
71-231
               

               
Cow position:
               
chr13:37621345-37621506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
71-233
               

               
Cow position:
               
chr13:24110494-24110331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
71-240
               

               
Cow position:
               
chr13:51813921-51814087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
71-244
               

               
Cow position:
               
chr13:6663739-6663915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
71-293
               

               
Cow position:
               
chr13:7046884-7046660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
71-293
               

               
Cow position:
               
chr13:9161937-9161714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
67, 166
               

               
Conread position:
               
71-293
               

               
Cow position:
               
chr13:15997049-15996815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 163
               

               
Conread position:
               
71-301
               

               
Cow position:
               
chr13:47675920-47676164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 225
               

               
Conread position:
               
71-304
               

               
Cow position:
               
chr13:21980961-21981200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
71-305
               

               
Cow position:
               
chr13:45353045-45352794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
72-231
               

               
Cow position:
               
chr13:13775230-13775390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
72-244
               

               
Cow position:
               
chr13:15083673-15083502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
72-287
               

               
Cow position:
               
chr13:25941250-25941476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 127
               

               
Conread position:
               
72-292
               

               
Cow position:
               
chr13:50646621-50646848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
72-299
               

               
Cow position:
               
chr13:47193394-47193182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
185, 43
               

               
Conread position:
               
72-304
               

               
Cow position:
               
chr13:15060639-15060422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
72-311
               

               
Cow position:
               
chr13:54286716-54286960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
73-244
               

               
Cow position:
               
chr13:6926529-6926353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
73-294
               

               
Cow position:
               
chr13:6183407-6183652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 211
               

               
Conread position:
               
73-297
               

               
Cow position:
               
chr13:20520073-20519847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
65, 167
               

               
Conread position:
               
73-304
               

               
Cow position:
               
chr13:33974745-33974515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
65, 98
               

               
Conread position:
               
80-212
               

               
Cow position:
               
chr13:19750720-19750587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
80-212
               

               
Cow position:
               
chr13:42229314-42229185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
80-212
               

               
Cow position:
               
chr13:48554370-48554238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 88
               

               
Conread position:
               
80-244
               

               
Cow position:
               
chr13:16908222-16908054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
80-249
               

               
Cow position:
               
chr13:39398658-39398481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
80-280
               

               
Cow position:
               
chr13:44003704-44003492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
80-286
               

               
Cow position:
               
chr13:6980924-6980712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
149, 115
               

               
Conread position:
               
80-287
               

               
Cow position:
               
chr13:7104659-7104444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 200
               

               
Conread position:
               
80-289
               

               
Cow position:
               
chr13:47243550-47243768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
80-297
               

               
Cow position:
               
chr13:6486246-6486477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
139, 56
               

               
Conread position:
               
80-301
               

               
Cow position:
               
chr13:9707744-9707975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
80-304
               

               
Cow position:
               
chr13:15143838-15144064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
128, 162
               

               
Conread position:
               
80-307
               

               
Cow position:
               
chr13:32017507-32017754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
80-311
               

               
Cow position:
               
chr13:49356044-49356288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 155
               

               
Conread position:
               
80-321
               

               
Cow position:
               
chr13:50768601-50768342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
81-214
               

               
Cow position:
               
chr13:19117745-19117614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
81-272
               

               
Cow position:
               
chr13:52568999-52569185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
52, 137
               

               
Conread position:
               
81-285
               

               
Cow position:
               
chr13:8699733-8699955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
81-290
               

               
Cow position:
               
chr13:54652325-54652526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
81-293
               

               
Cow position:
               
chr13:10522937-10522719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
132, 6
               

               
Conread position:
               
81-293
               

               
Cow position:
               
chr13:49457685-49457482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
83-231
               

               
Cow position:
               
chr13:23167099-23167248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
83-243
               

               
Cow position:
               
chr13:18615386-18615220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
84-243
               

               
Cow position:
               
chr13:7190968-7190807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
84-288
               

               
Cow position:
               
chr13:50582819-50583033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
85-295
               

               
Cow position:
               
chr13:14796205-14795983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
86-233
               

               
Cow position:
               
chr13:37751068-37751214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
86-293
               

               
Cow position:
               
chr13:48222549-48222770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
88-285
               

               
Cow position:
               
chr13:42849136-42849342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
89-234
               

               
Cow position:
               
chr13:21295071-21294927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 121
               

               
Conread position:
               
91-275
               

               
Cow position:
               
chr13:4404525-4404332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
93-244
               

               
Cow position:
               
chr13:37980766-37980918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
93-295
               

               
Cow position:
               
chr13:9687697-9687891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
94-230
               

               
Cow position:
               
chr13:9884526-9884388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
94-234
               

               
Cow position:
               
chr13:43787846-43787986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
94-234
               

               
Cow position:
               
chr13:43839685-43839825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
95-231
               

               
Cow position:
               
chr13:47227369-47227506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 122
               

               
Conread position:
               
96-306
               

               
Cow position:
               
chr13:30148574-30148788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
100-290
               

               
Cow position:
               
chr13:8392912-8393099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
100-291
               

               
Cow position:
               
chr13:53865621-53865416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
102-287
               

               
Cow position:
               
chr13:8637681-8637480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
102-301
               

               
Cow position:
               
chr13:3153733-3153519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
102-304
               

               
Cow position:
               
chr13:28520444-28520639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
102-313
               

               
Cow position:
               
chr13:11942196-11942415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 131
               

               
Conread position:
               
102-318
               

               
Cow position:
               
chr13:9124907-9124681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
106-332
               

               
Cow position:
               
chr13:45499208-45498973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 216
               

               
Conread position:
               
108-298
               

               
Cow position:
               
chr13:22046031-22046236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
118-291
               

               
Cow position:
               
chr13:41979180-41979355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 10
               

               
Conread position:
               
120-309
               

               
Cow position:
               
chr13:8240628-8240442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 114
               

               
Conread position:
               
121-233
               

               
Cow position:
               
chr13:15808730-15808619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
123-294
               

               
Cow position:
               
chr13:8367677-8367497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
127-298
               

               
Cow position:
               
chr13:7097541-7097361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
138-274
               

               
Cow position:
               
chr13:57446173-57446314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
138-312
               

               
Cow position:
               
chr13:34299913-34300087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
74, 100
               

               
Conread position:
               
141-301
               

               
Cow position:
               
chr13:53847178-53847349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
145-300
               

               
Cow position:
               
chr13:42614023-42613864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
155-294
               

               
Cow position:
               
chr13:3003404-3003264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
59, 42
               
Show alignments to all cow chromosomes.