Cow genome map

Conread name: rcbl0_009068.y1

Conread position: 2-212
Cow position: chr21:734559-734766 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 69

Conread position: 3-277
Cow position: chr21:28030252-28030533 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 232

Conread position: 4-287
Cow position: chr21:18064948-18064662 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 26

Conread position: 4-295
Cow position: chr21:12301550-12301258 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 41, 16

Conread position: 5-243
Cow position: chr21:13585090-13584852 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 9, 76

Conread position: 6-157
Cow position: chr21:10727244-10727399 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 6-239
Cow position: chr21:45473785-45473556 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 132, 40

Conread position: 6-286
Cow position: chr21:17890270-17890566 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 7-205
Cow position: chr21:28955476-28955671 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 131

Conread position: 7-231
Cow position: chr21:42841632-42841401 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 7-244
Cow position: chr21:41579724-41579965 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 38

Conread position: 7-288
Cow position: chr21:14452204-14452498 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 38

Conread position: 7-293
Cow position: chr21:20165609-20165910 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 277

Conread position: 7-301
Cow position: chr21:33580389-33580689 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 41, 122

Conread position: 7-304
Cow position: chr21:27863547-27863238 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 55, 196

Conread position: 8-213
Cow position: chr21:45262842-45262632 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 38

Conread position: 8-243
Cow position: chr21:11360008-11360232 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 73, 38

Conread position: 9-216
Cow position: chr21:7377957-7377745 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 9-220
Cow position: chr21:31662435-31662652 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 9-274
Cow position: chr21:41107790-41107525 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 78, 25

Conread position: 9-297
Cow position: chr21:47715573-47715290 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 53

Conread position: 9-301
Cow position: chr21:47007-47326 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 11-151
Cow position: chr21:33360061-33359925 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 106

Conread position: 11-212
Cow position: chr21:6758319-6758520 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 68

Conread position: 11-213
Cow position: chr21:28429415-28429622 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 51

Conread position: 11-230
Cow position: chr21:36795572-36795798 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 11-231
Cow position: chr21:18779999-18779780 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 101

Conread position: 11-244
Cow position: chr21:6624132-6624368 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 60, 40

Conread position: 11-286
Cow position: chr21:17982948-17983234 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 148

Conread position: 11-288
Cow position: chr21:42209659-42209380 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 193

Conread position: 11-290
Cow position: chr21:23586852-23587139 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 184

Conread position: 11-292
Cow position: chr21:10004915-10004614 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 34, 140

Conread position: 11-293
Cow position: chr21:10673100-10673380 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 29

Conread position: 14-227
Cow position: chr21:28989584-28989804 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 6

Conread position: 14-293
Cow position: chr21:34739815-34740096 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 216

Conread position: 16-174
Cow position: chr21:37384462-37384622 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 16-244
Cow position: chr21:36696113-36695878 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 16-298
Cow position: chr21:17511755-17512049 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 40

Conread position: 16-303
Cow position: chr21:38900755-38901044 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 38

Conread position: 17-176
Cow position: chr21:36789769-36789936 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 17-183
Cow position: chr21:34390997-34390827 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 17-183
Cow position: chr21:40432428-40432593 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 53

Conread position: 17-186
Cow position: chr21:1591530-1591705 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 17-209
Cow position: chr21:40192323-40192131 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 81

Conread position: 17-210
Cow position: chr21:10514782-10514976 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 172

Conread position: 17-211
Cow position: chr21:33562992-33563179 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 17-212
Cow position: chr21:33699-33896 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 17-212
Cow position: chr21:395848-396044 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 28, 53

Conread position: 17-212
Cow position: chr21:10001053-10001252 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 17-212
Cow position: chr21:24642498-24642689 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 152

Conread position: 17-212
Cow position: chr21:30835341-30835540 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 72

Conread position: 17-215
Cow position: chr21:45921080-45920878 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 185

Conread position: 17-221
Cow position: chr21:44861133-44860932 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 62

Conread position: 17-225
Cow position: chr21:15976611-15976822 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 152

Conread position: 17-225
Cow position: chr21:25382992-25383216 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 17-225
Cow position: chr21:41974397-41974188 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 117

Conread position: 17-229
Cow position: chr21:18790581-18790372 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 55

Conread position: 17-230
Cow position: chr21:26244898-26245109 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 122, 29

Conread position: 17-231
Cow position: chr21:10538272-10538059 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 17

Conread position: 17-231
Cow position: chr21:13365316-13365538 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 118

Conread position: 17-231
Cow position: chr21:16696347-16696569 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 66

Conread position: 17-231
Cow position: chr21:19513843-19514048 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 75

Conread position: 17-231
Cow position: chr21:28237734-28237512 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 116

Conread position: 17-231
Cow position: chr21:37345119-37344904 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 28, 55

Conread position: 17-231
Cow position: chr21:42384488-42384703 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 55

Conread position: 17-233
Cow position: chr21:30607111-30606899 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 28, 175

Conread position: 17-233
Cow position: chr21:40168649-40168426 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 17-233
Cow position: chr21:47363760-47363535 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 17-243
Cow position: chr21:10264011-10264243 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 40, 9

Conread position: 17-244
Cow position: chr21:3361035-3360807 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 88

Conread position: 17-244
Cow position: chr21:11644992-11644757 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 208

Conread position: 17-244
Cow position: chr21:19196184-19195952 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 17-244
Cow position: chr21:20152932-20153166 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 177

Conread position: 17-244
Cow position: chr21:21169514-21169284 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 116

Conread position: 17-244
Cow position: chr21:31253522-31253741 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 52

Conread position: 17-244
Cow position: chr21:41621102-41621337 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 28, 164

Conread position: 17-244
Cow position: chr21:45329968-45329745 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 12, 55

Conread position: 17-256
Cow position: chr21:5464725-5464968 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 101

Conread position: 17-271
Cow position: chr21:28810282-28810027 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 31

Conread position: 17-272
Cow position: chr21:10561606-10561336 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 237

Conread position: 17-277
Cow position: chr21:1059056-1059312 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 82

Conread position: 17-280
Cow position: chr21:29014935-29014660 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 198

Conread position: 17-280
Cow position: chr21:36910718-36910994 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 65

Conread position: 17-280
Cow position: chr21:42135642-42135362 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 17-283
Cow position: chr21:30231713-30231436 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 23

Conread position: 17-283
Cow position: chr21:47764137-47763866 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 55

Conread position: 17-285
Cow position: chr21:33414107-33413835 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 92

Conread position: 17-288
Cow position: chr21:29978782-29978511 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 200

Conread position: 17-288
Cow position: chr21:46552127-46551860 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 208

Conread position: 17-290
Cow position: chr21:11740143-11739854 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 150

Conread position: 17-291
Cow position: chr21:5426919-5427195 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 169

Conread position: 17-291
Cow position: chr21:33791388-33791129 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 66

Conread position: 17-291
Cow position: chr21:37014424-37014157 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 36

Conread position: 17-292
Cow position: chr21:32339759-32339476 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 68

Conread position: 17-292
Cow position: chr21:33727487-33727211 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 195

Conread position: 17-292
Cow position: chr21:37235363-37235632 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 36

Conread position: 17-292
Cow position: chr21:38449469-38449183 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 123

Conread position: 17-293
Cow position: chr21:641564-641854 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 17-293
Cow position: chr21:643305-643590 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 19

Conread position: 17-294
Cow position: chr21:6051485-6051776 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 121, 60

Conread position: 17-294
Cow position: chr21:11779551-11779267 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 28, 35

Conread position: 17-294
Cow position: chr21:18155589-18155293 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 17-294
Cow position: chr21:21907451-21907170 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 99

Conread position: 17-294
Cow position: chr21:45355814-45356086 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 70

Conread position: 17-295
Cow position: chr21:977167-976876 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 64

Conread position: 17-295
Cow position: chr21:7394360-7394642 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 118

Conread position: 17-295
Cow position: chr21:9940212-9939938 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 178

Conread position: 17-295
Cow position: chr21:17183901-17184190 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 61

Conread position: 17-296
Cow position: chr21:16152414-16152713 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 17-296
Cow position: chr21:27229816-27229530 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 124

Conread position: 17-297
Cow position: chr21:9416226-9416516 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 222

Conread position: 17-297
Cow position: chr21:10823545-10823814 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 21, 55

Conread position: 17-297
Cow position: chr21:12461992-12461695 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 28, 0

Conread position: 17-297
Cow position: chr21:27146011-27145720 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 44

Conread position: 17-298
Cow position: chr21:868947-868644 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 17-298
Cow position: chr21:17455364-17455658 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 102

Conread position: 17-298
Cow position: chr21:20418706-20418431 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 28, 187

Conread position: 17-298
Cow position: chr21:28244447-28244743 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 100

Conread position: 17-298
Cow position: chr21:34010419-34010120 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 86

Conread position: 17-298
Cow position: chr21:40134138-40134421 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 31, 54

Conread position: 17-298
Cow position: chr21:42501017-42501327 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 17-298
Cow position: chr21:44214102-44214386 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 28, 215

Conread position: 17-300
Cow position: chr21:6997918-6998218 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 0

Conread position: 17-301
Cow position: chr21:8206746-8207035 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 28, 156

Conread position: 17-301
Cow position: chr21:23980202-23979901 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 28, 55

Conread position: 17-301
Cow position: chr21:33982828-33982536 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 28, 120

Conread position: 17-301
Cow position: chr21:34654054-34654349 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 57, 95

Conread position: 17-301
Cow position: chr21:40589507-40589202 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 28, 0

Conread position: 17-301
Cow position: chr21:41155841-41156149 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 17-302
Cow position: chr21:957650-957948 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 115

Conread position: 17-304
Cow position: chr21:6834028-6834330 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 28, 281

Conread position: 17-305
Cow position: chr21:4281893-4281601 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 36

Conread position: 17-305
Cow position: chr21:9036277-9036585 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 201
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 17-305
Cow position: chr21:28919546-28919248 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 152

Conread position: 17-307
Cow position: chr21:6713548-6713240 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 28, 0

Conread position: 17-307
Cow position: chr21:45971193-45970897 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 31, 121

Conread position: 17-311
Cow position: chr21:27521353-27521054 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 80

Conread position: 17-318
Cow position: chr21:38720230-38720545 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 31, 73

Conread position: 17-327
Cow position: chr21:20160656-20160985 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 54

Conread position: 17-330
Cow position: chr21:15584442-15584115 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 28, 252

Conread position: 18-209
Cow position: chr21:8235575-8235388 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 111

Conread position: 18-210
Cow position: chr21:42414122-42413922 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 18-212
Cow position: chr21:3818189-3818385 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 27, 50

Conread position: 18-214
Cow position: chr21:10633661-10633462 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 123

Conread position: 18-221
Cow position: chr21:5153609-5153808 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 30

Conread position: 18-230
Cow position: chr21:36909914-36910128 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 54

Conread position: 18-231
Cow position: chr21:471656-471870 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 65

Conread position: 18-231
Cow position: chr21:43259202-43259415 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 120, 36

Conread position: 18-235
Cow position: chr21:41597800-41598011 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 53

Conread position: 18-243
Cow position: chr21:10410199-10410433 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 130

Conread position: 18-244
Cow position: chr21:10114354-10114124 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 118

Conread position: 18-244
Cow position: chr21:22210265-22210034 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 27, 64

Conread position: 18-275
Cow position: chr21:42007484-42007216 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 98

Conread position: 18-286
Cow position: chr21:23606655-23606930 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 28

Conread position: 18-291
Cow position: chr21:15911379-15911646 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 123

Conread position: 18-291
Cow position: chr21:31159381-31159654 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 115

Conread position: 18-292
Cow position: chr21:5898420-5898140 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 27

Conread position: 18-292
Cow position: chr21:30236838-30236573 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 47

Conread position: 18-297
Cow position: chr21:1511270-1511560 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 27, 123

Conread position: 18-300
Cow position: chr21:12154111-12154403 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 8, 45

Conread position: 18-300
Cow position: chr21:41140738-41140439 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 114

Conread position: 18-301
Cow position: chr21:6909900-6909611 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 64

Conread position: 18-305
Cow position: chr21:15544239-15543955 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 52

Conread position: 19-203
Cow position: chr21:12801772-12801579 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 19-212
Cow position: chr21:7581926-7581728 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 63

Conread position: 19-221
Cow position: chr21:44671731-44671930 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 26, 52

Conread position: 19-244
Cow position: chr21:9990490-9990720 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 72

Conread position: 19-244
Cow position: chr21:10118539-10118775 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 21, 83

Conread position: 19-279
Cow position: chr21:17193773-17193492 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 19-280
Cow position: chr21:31691462-31691718 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 125

Conread position: 19-294
Cow position: chr21:40266104-40266396 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 99

Conread position: 19-295
Cow position: chr21:28733934-28733640 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 26, 99

Conread position: 19-296
Cow position: chr21:3254131-3254406 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 28

Conread position: 19-313
Cow position: chr21:23801148-23800862 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 194

Conread position: 20-204
Cow position: chr21:45915729-45915549 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 50

Conread position: 20-234
Cow position: chr21:19258805-19259016 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 111

Conread position: 20-296
Cow position: chr21:37706438-37706138 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 20-301
Cow position: chr21:47714024-47713731 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 114

Conread position: 22-212
Cow position: chr21:23322095-23321901 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 25-287
Cow position: chr21:3585381-3585100 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 25-290
Cow position: chr21:37299446-37299727 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 21

Conread position: 25-291
Cow position: chr21:802321-802055 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 20, 44

Conread position: 25-294
Cow position: chr21:47760755-47761042 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 75

Conread position: 26-298
Cow position: chr21:71575-71861 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 10

Conread position: 29-215
Cow position: chr21:6387990-6388179 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 16, 50

Conread position: 29-233
Cow position: chr21:28924100-28924308 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 16, 0

Conread position: 29-245
Cow position: chr21:24858303-24858526 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 147

Conread position: 29-286
Cow position: chr21:8426438-8426706 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 17

Conread position: 29-291
Cow position: chr21:13395586-13395849 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 16, 50

Conread position: 29-301
Cow position: chr21:44565730-44565453 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 104

Conread position: 29-304
Cow position: chr21:4399793-4400072 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 72

Conread position: 29-332
Cow position: chr21:38918193-38918517 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 95

Conread position: 30-288
Cow position: chr21:13588755-13589027 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 16

Conread position: 31-204
Cow position: chr21:38121091-38121270 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 32-212
Cow position: chr21:26648018-26647839 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 91

Conread position: 32-235
Cow position: chr21:13128105-13127897 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 90

Conread position: 32-288
Cow position: chr21:7768427-7768691 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 13, 185

Conread position: 32-293
Cow position: chr21:44251850-44251570 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 13, 244

Conread position: 34-231
Cow position: chr21:30256275-30256078 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 124

Conread position: 35-217
Cow position: chr21:1764868-1764686 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 37

Conread position: 35-237
Cow position: chr21:46132571-46132777 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 35-274
Cow position: chr21:14760568-14760808 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 74

Conread position: 35-302
Cow position: chr21:16604320-16604036 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 11

Conread position: 35-304
Cow position: chr21:8431104-8430815 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 11

Conread position: 35-305
Cow position: chr21:25764630-25764897 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 10, 16

Conread position: 36-212
Cow position: chr21:5566983-5567163 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 36-285
Cow position: chr21:22718787-22718521 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 9, 117

Conread position: 38-290
Cow position: chr21:41918247-41917972 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 7, 120

Conread position: 39-275
Cow position: chr21:17642983-17642748 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 116

Conread position: 40-212
Cow position: chr21:3400832-3400655 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 14

Conread position: 40-212
Cow position: chr21:27341589-27341418 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 12

Conread position: 40-280
Cow position: chr21:23568221-23568482 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 40-286
Cow position: chr21:18568638-18568374 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 40-299
Cow position: chr21:23672752-23673022 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 72

Conread position: 40-301
Cow position: chr21:36508243-36508508 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 173, 40

Conread position: 40-304
Cow position: chr21:44724363-44724095 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 99, 40

Conread position: 41-244
Cow position: chr21:23535714-23535921 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 9, 61

Conread position: 46-201
Cow position: chr21:23460148-23460299 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 46-287
Cow position: chr21:29658287-29658538 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 92, 35

Conread position: 48-211
Cow position: chr21:7583856-7584026 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 48-230
Cow position: chr21:19360167-19359981 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 17

Conread position: 51-285
Cow position: chr21:44829743-44829494 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 26

Conread position: 53-210
Cow position: chr21:17265985-17265825 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 146

Conread position: 57-274
Cow position: chr21:41287775-41287545 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 57-301
Cow position: chr21:42144847-42145097 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 165, 55

Conread position: 59-209
Cow position: chr21:7823382-7823538 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 129
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 16, 103

Conread position: 59-231
Cow position: chr21:42463667-42463498 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 60

Conread position: 59-244
Cow position: chr21:39319388-39319198 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 59-296
Cow position: chr21:8545996-8545747 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 22, 57

Conread position: 59-298
Cow position: chr21:31279280-31279528 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 79, 21

Conread position: 60-313
Cow position: chr21:9278547-9278818 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 51, 26

Conread position: 61-291
Cow position: chr21:14464604-14464854 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 68-295
Cow position: chr21:20318544-20318785 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 68

Conread position: 69-212
Cow position: chr21:34210047-34209904 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 90

Conread position: 69-280
Cow position: chr21:24797689-24797912 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 67

Conread position: 70-200
Cow position: chr21:8231644-8231513 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 94

Conread position: 70-215
Cow position: chr21:42562666-42562806 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 70-231
Cow position: chr21:8213244-8213085 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 70-293
Cow position: chr21:15271414-15271168 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 174

Conread position: 70-309
Cow position: chr21:37838032-37837793 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 68, 137

Conread position: 71-212
Cow position: chr21:30119728-30119871 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 71-229
Cow position: chr21:46470222-46470377 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 71-230
Cow position: chr21:44592175-44592013 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 71-231
Cow position: chr21:30157770-30157610 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 67, 132

Conread position: 71-231
Cow position: chr21:41610201-41610364 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 10, 142

Conread position: 71-244
Cow position: chr21:24266531-24266352 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 27

Conread position: 71-293
Cow position: chr21:12322537-12322769 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 31

Conread position: 71-301
Cow position: chr21:46451918-46451694 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 49

Conread position: 71-305
Cow position: chr21:40475534-40475784 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 42

Conread position: 71-313
Cow position: chr21:25344895-25345158 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 259

Conread position: 72-212
Cow position: chr21:22939804-22939947 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 9

Conread position: 72-213
Cow position: chr21:40769328-40769471 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 72-231
Cow position: chr21:20213741-20213582 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 137

Conread position: 72-287
Cow position: chr21:43692852-43693081 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 72-292
Cow position: chr21:36763097-36763331 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 67, 0

Conread position: 73-298
Cow position: chr21:18135836-18135613 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 9, 39

Conread position: 73-304
Cow position: chr21:27677518-27677763 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 8, 66

Conread position: 73-304
Cow position: chr21:36682361-36682607 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 74-212
Cow position: chr21:712979-713120 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 78-204
Cow position: chr21:35647786-35647659 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 80-204
Cow position: chr21:7221296-7221171 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 80-208
Cow position: chr21:12207758-12207629 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 80-213
Cow position: chr21:6736145-6736011 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 80-213
Cow position: chr21:17062968-17063099 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 80-231
Cow position: chr21:13163903-13164057 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 80-231
Cow position: chr21:26567734-26567581 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 36

Conread position: 80-287
Cow position: chr21:13225759-13225981 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 80-290
Cow position: chr21:41040988-41041215 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 58, 126

Conread position: 80-291
Cow position: chr21:25014982-25014772 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 97, 50

Conread position: 80-294
Cow position: chr21:30938628-30938394 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 81-219
Cow position: chr21:7493222-7493089 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 81-300
Cow position: chr21:40291701-40291477 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 57, 42

Conread position: 84-280
Cow position: chr21:28907496-28907292 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 54

Conread position: 84-300
Cow position: chr21:9905801-9905584 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 150, 46

Conread position: 86-232
Cow position: chr21:14228230-14228083 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 86-306
Cow position: chr21:82117-82341 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 124

Conread position: 87-292
Cow position: chr21:37928700-37928921 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 88-244
Cow position: chr21:2537087-2536927 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 89-212
Cow position: chr21:8687090-8686966 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 92-231
Cow position: chr21:265680-265821 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 79

Conread position: 92-287
Cow position: chr21:31659091-31658890 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 122, 44

Conread position: 95-285
Cow position: chr21:48482469-48482268 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 43, 32

Conread position: 95-298
Cow position: chr21:5405875-5406087 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 95-302
Cow position: chr21:20548301-20548086 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 40

Conread position: 95-304
Cow position: chr21:40059087-40059297 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 162

Conread position: 96-209
Cow position: chr21:19927204-19927093 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 40

Conread position: 96-304
Cow position: chr21:20174378-20174593 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 97-287
Cow position: chr21:21940346-21940146 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 98-289
Cow position: chr21:26147141-26147325 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 6

Conread position: 98-297
Cow position: chr21:745238-745444 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 9

Conread position: 100-244
Cow position: chr21:29418636-29418780 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 30

Conread position: 100-301
Cow position: chr21:19458250-19458449 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 108

Conread position: 101-303
Cow position: chr21:30977192-30976988 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 51

Conread position: 101-304
Cow position: chr21:5218767-5218988 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 200

Conread position: 103-244
Cow position: chr21:7424947-7424804 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 13

Conread position: 105-283
Cow position: chr21:42017534-42017340 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 107-244
Cow position: chr21:5214419-5214561 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 108-301
Cow position: chr21:41737980-41738186 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 6

Conread position: 109-301
Cow position: chr21:37361169-37360961 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 117-228
Cow position: chr21:40305024-40305139 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 117-296
Cow position: chr21:30970016-30970208 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 117-301
Cow position: chr21:12298675-12298865 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 117-307
Cow position: chr21:27744106-27744314 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 90

Conread position: 117-311
Cow position: chr21:16796932-16797140 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 120-286
Cow position: chr21:43642621-43642781 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 96

Conread position: 121-298
Cow position: chr21:6945460-6945635 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 95

Conread position: 123-289
Cow position: chr21:438649-438822 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 123-305
Cow position: chr21:3135782-3135583 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 123-313
Cow position: chr21:13134688-13134885 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 168

Conread position: 127-298
Cow position: chr21:18495314-18495491 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 9

Conread position: 127-304
Cow position: chr21:42454952-42455138 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 85, 165

Conread position: 132-290
Cow position: chr21:30031289-30031128 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 101

Conread position: 138-293
Cow position: chr21:32536499-32536661 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 145-274
Cow position: chr21:3016076-3015943 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 154-299
Cow position: chr21:38867248-38867101 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 103

Show alignments to all cow chromosomes.