Cow genome map
| Conread name: | rcbl0_009068.y1 | 
| Conread position: | 4-220 | 
| Cow position: | chr3:37599549-37599331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 41, 58 | 
| Conread position: | 5-183 | 
| Cow position: | chr3:45897482-45897669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 5-183 | 
| Cow position: | chr3:45972574-45972387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 5-288 | 
| Cow position: | chr3:15443851-15443549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 40, 119 | 
| Conread position: | 7-212 | 
| Cow position: | chr3:42423452-42423239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 40, 148 | 
| Conread position: | 7-212 | 
| Cow position: | chr3:80581545-80581744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 38, 64 | 
| Conread position: | 7-228 | 
| Cow position: | chr3:73820489-73820266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 53, 94 | 
| Conread position: | 7-242 | 
| Cow position: | chr3:59630621-59630394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 38, 71 | 
| Conread position: | 7-244 | 
| Cow position: | chr3:57754596-57754354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 77, 231 | 
| Conread position: | 7-276 | 
| Cow position: | chr3:77271393-77271122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 38, 64 | 
| Conread position: | 7-277 | 
| Cow position: | chr3:14598832-14599086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 38, 16 | 
| Conread position: | 7-293 | 
| Cow position: | chr3:13301967-13301667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 38, 65 | 
| Conread position: | 7-293 | 
| Cow position: | chr3:48241497-48241789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 38, 92 | 
| Conread position: | 7-293 | 
| Cow position: | chr3:55094354-55094048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 7-298 | 
| Cow position: | chr3:17456383-17456080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 74, 27 | 
| Conread position: | 7-298 | 
| Cow position: | chr3:57764108-57764400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 38, 59 | 
| Conread position: | 7-301 | 
| Cow position: | chr3:59649136-59649443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 43, 206 | 
| Conread position: | 9-294 | 
| Cow position: | chr3:23092095-23091814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 36, 162 | 
| Conread position: | 9-298 | 
| Cow position: | chr3:210200-210510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 25, 38 | 
| Conread position: | 10-244 | 
| Cow position: | chr3:75238341-75238581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 11-193 | 
| Cow position: | chr3:10896715-10896892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 34, 60 | 
| Conread position: | 11-196 | 
| Cow position: | chr3:78896534-78896720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 70, 35 | 
| Conread position: | 11-202 | 
| Cow position: | chr3:58969015-58968824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 34, 41 | 
| Conread position: | 11-211 | 
| Cow position: | chr3:66292292-66292088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 63, 34 | 
| Conread position: | 11-228 | 
| Cow position: | chr3:22509911-22510130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 34, 162 | 
| Conread position: | 11-228 | 
| Cow position: | chr3:35621187-35621405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 34, 109 | 
| Conread position: | 11-233 | 
| Cow position: | chr3:54100836-54100616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 67 | 
| Conread position: | 11-287 | 
| Cow position: | chr3:77581994-77582282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 41, 62 | 
| Conread position: | 11-294 | 
| Cow position: | chr3:58765194-58764903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 34, 51 | 
| Conread position: | 11-301 | 
| Cow position: | chr3:15228934-15228651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 127, 35 | 
| Conread position: | 11-301 | 
| Cow position: | chr3:54946013-54946311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 34, 260 | 
| Conread position: | 13-288 | 
| Cow position: | chr3:53790650-53790365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 13-297 | 
| Cow position: | chr3:55177864-55177565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 14-244 | 
| Cow position: | chr3:53046776-53046537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 12, 123 | 
| Conread position: | 14-296 | 
| Cow position: | chr3:73741972-73741703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 34, 6 | 
| Conread position: | 14-301 | 
| Cow position: | chr3:67744740-67744451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 12, 66 | 
| Conread position: | 15-232 | 
| Cow position: | chr3:27940254-27940034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 30, 107 | 
| Conread position: | 16-216 | 
| Cow position: | chr3:35874078-35873880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 29, 158 | 
| Conread position: | 16-244 | 
| Cow position: | chr3:11987218-11987449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 26, 220 | 
| Conread position: | 16-244 | 
| Cow position: | chr3:15388106-15388343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 29, 18 | 
| Conread position: | 16-297 | 
| Cow position: | chr3:46541938-46541665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 62, 202 | 
| Conread position: | 16-297 | 
| Cow position: | chr3:61894279-61893998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 32, 104 | 
| Conread position: | 16-309 | 
| Cow position: | chr3:55319013-55318699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 29, 187 | 
| Conread position: | 16-325 | 
| Cow position: | chr3:45700696-45701014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 36, 241 | 
| Conread position: | 17-176 | 
| Cow position: | chr3:14633096-14632930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-177 | 
| Cow position: | chr3:66609952-66609790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 28, 118 | 
| Conread position: | 17-181 | 
| Cow position: | chr3:74878698-74878531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-182 | 
| Cow position: | chr3:72019008-72019175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 44, 23 | 
| Conread position: | 17-182 | 
| Cow position: | chr3:81359214-81359048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 64, 28 | 
| Conread position: | 17-198 | 
| Cow position: | chr3:3638078-3638253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 28, 54 | 
| Conread position: | 17-200 | 
| Cow position: | chr3:71430316-71430127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-204 | 
| Cow position: | chr3:5097097-5097288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-204 | 
| Cow position: | chr3:11711852-11712046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-204 | 
| Cow position: | chr3:55109726-55109532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-206 | 
| Cow position: | chr3:74502429-74502242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 64, 34 | 
| Conread position: | 17-210 | 
| Cow position: | chr3:75687547-75687351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 28, 180 | 
| Conread position: | 17-211 | 
| Cow position: | chr3:49650277-49650476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 17-212 | 
| Cow position: | chr3:26960699-26960499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-212 | 
| Cow position: | chr3:27727939-27727742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 45, 28 | 
| Conread position: | 17-212 | 
| Cow position: | chr3:30222078-30222280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-212 | 
| Cow position: | chr3:34270806-34271003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 33, 125 | 
| Conread position: | 17-212 | 
| Cow position: | chr3:72504008-72503807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-213 | 
| Cow position: | chr3:45648023-45648220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 28, 124 | 
| Conread position: | 17-213 | 
| Cow position: | chr3:46901088-46901287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 28, 54 | 
| Conread position: | 17-218 | 
| Cow position: | chr3:27697086-27696883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 28, 45 | 
| Conread position: | 17-225 | 
| Cow position: | chr3:20677944-20677740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 28, 63 | 
| Conread position: | 17-225 | 
| Cow position: | chr3:24935261-24935468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 28, 39 | 
| Conread position: | 17-225 | 
| Cow position: | chr3:80053648-80053440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 33, 54 | 
| Conread position: | 17-226 | 
| Cow position: | chr3:61278806-61279011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 28, 55 | 
| Conread position: | 17-227 | 
| Cow position: | chr3:66884049-66883841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 28, 121 | 
| Conread position: | 17-229 | 
| Cow position: | chr3:49790919-49790706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 28, 60 | 
| Conread position: | 17-229 | 
| Cow position: | chr3:52017659-52017879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 17-229 | 
| Cow position: | chr3:59884181-59883964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 31, 197 | 
| Conread position: | 17-230 | 
| Cow position: | chr3:26920800-26921016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 28, 17 | 
| Conread position: | 17-230 | 
| Cow position: | chr3:33329704-33329926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 17-230 | 
| Cow position: | chr3:52863293-52863076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-230 | 
| Cow position: | chr3:55970397-55970613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 28, 180 | 
| Conread position: | 17-231 | 
| Cow position: | chr3:5100876-5100662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 31, 53 | 
| Conread position: | 17-231 | 
| Cow position: | chr3:10103938-10104148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 31, 15 | 
| Conread position: | 17-231 | 
| Cow position: | chr3:12712027-12711805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-231 | 
| Cow position: | chr3:17447718-17447507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 60, 23 | 
| Conread position: | 17-231 | 
| Cow position: | chr3:26874483-26874697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 28, 104 | 
| Conread position: | 17-231 | 
| Cow position: | chr3:32457091-32457301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 28, 54 | 
| Conread position: | 17-231 | 
| Cow position: | chr3:58318063-58317840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-231 | 
| Cow position: | chr3:66900845-66900623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 15, 31 | 
| Conread position: | 17-231 | 
| Cow position: | chr3:80072017-80072237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-231 | 
| Cow position: | chr3:81471204-81470988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 58, 23 | 
| Conread position: | 17-234 | 
| Cow position: | chr3:57624355-57624573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 28, 194 | 
| Conread position: | 17-234 | 
| Cow position: | chr3:59691789-59691999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 28, 20 | 
| Conread position: | 17-234 | 
| Cow position: | chr3:62046553-62046775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 28, 7 | 
| Conread position: | 17-234 | 
| Cow position: | chr3:63269113-63269330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 28, 185 | 
| Conread position: | 17-236 | 
| Cow position: | chr3:5366661-5366884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 35, 55 | 
| Conread position: | 17-243 | 
| Cow position: | chr3:19585752-19585984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-243 | 
| Cow position: | chr3:23408461-23408243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 28, 65 | 
| Conread position: | 17-243 | 
| Cow position: | chr3:43726967-43727194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 28, 148 | 
| Conread position: | 17-243 | 
| Cow position: | chr3:53221905-53222132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 99, 177 | 
| Conread position: | 17-243 | 
| Cow position: | chr3:70334804-70334572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 17-244 | 
| Cow position: | chr3:12978725-12978494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-244 | 
| Cow position: | chr3:19793700-19793469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 12, 36 | 
| Conread position: | 17-244 | 
| Cow position: | chr3:28898331-28898098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 17-244 | 
| Cow position: | chr3:55124394-55124160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 13, 180 | 
| Conread position: | 17-244 | 
| Cow position: | chr3:59040458-59040691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 23, 181 | 
| Conread position: | 17-244 | 
| Cow position: | chr3:63179753-63179981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 28, 35 | 
| Conread position: | 17-244 | 
| Cow position: | chr3:65413389-65413153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-244 | 
| Cow position: | chr3:72390976-72391209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 28, 49 | 
| Conread position: | 17-244 | 
| Cow position: | chr3:82461069-82461297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 28, 205 | 
| Conread position: | 17-247 | 
| Cow position: | chr3:75045986-75045755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 31, 87 | 
| Conread position: | 17-275 | 
| Cow position: | chr3:59000861-59000599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 59, 115 | 
| Conread position: | 17-275 | 
| Cow position: | chr3:61323224-61323489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 64, 30 | 
| Conread position: | 17-283 | 
| Cow position: | chr3:74846819-74846553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 45, 29 | 
| Conread position: | 17-286 | 
| Cow position: | chr3:37041305-37041591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 17-286 | 
| Cow position: | chr3:73395012-73395290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 28, 54 | 
| Conread position: | 17-287 | 
| Cow position: | chr3:18393497-18393224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 112, 28 | 
| Conread position: | 17-288 | 
| Cow position: | chr3:8393242-8393516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 47, 28 | 
| Conread position: | 17-288 | 
| Cow position: | chr3:50614528-50614800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 28, 208 | 
| Conread position: | 17-289 | 
| Cow position: | chr3:7661743-7662035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 28, 125 | 
| Conread position: | 17-289 | 
| Cow position: | chr3:24872605-24872869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 33, 78 | 
| Conread position: | 17-289 | 
| Cow position: | chr3:51234205-51233926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 107 | 
| Conread position: | 17-289 | 
| Cow position: | chr3:73298977-73299244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 28, 60 | 
| Conread position: | 17-290 | 
| Cow position: | chr3:2506585-2506297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 28, 62 | 
| Conread position: | 17-290 | 
| Cow position: | chr3:18686798-18687080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 28, 63 | 
| Conread position: | 17-290 | 
| Cow position: | chr3:68145951-68145676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 28, 144 | 
| Conread position: | 17-291 | 
| Cow position: | chr3:5365568-5365845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 28, 211 | 
| Conread position: | 17-291 | 
| Cow position: | chr3:5374225-5374489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 28, 17 | 
| Conread position: | 17-292 | 
| Cow position: | chr3:2393072-2392788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 28, 99 | 
| Conread position: | 17-292 | 
| Cow position: | chr3:3889676-3889396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 59, 23 | 
| Conread position: | 17-292 | 
| Cow position: | chr3:9641456-9641736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 38, 227 | 
| Conread position: | 17-292 | 
| Cow position: | chr3:57273956-57274240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 28, 36 | 
| Conread position: | 17-293 | 
| Cow position: | chr3:70334073-70333787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 28, 170 | 
| Conread position: | 17-294 | 
| Cow position: | chr3:3649327-3649056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 28, 62 | 
| Conread position: | 17-294 | 
| Cow position: | chr3:14194289-14194006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 48, 120 | 
| Conread position: | 17-294 | 
| Cow position: | chr3:15954196-15953899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 28, 269 | 
| Conread position: | 17-294 | 
| Cow position: | chr3:39969977-39969680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 27, 128 | 
| Conread position: | 17-294 | 
| Cow position: | chr3:48252775-48253062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 63, 28 | 
| Conread position: | 17-294 | 
| Cow position: | chr3:59597074-59597356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 28, 70 | 
| Conread position: | 17-294 | 
| Cow position: | chr3:67929370-67929076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-294 | 
| Cow position: | chr3:79884591-79884297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 28, 92 | 
| Conread position: | 17-294 | 
| Cow position: | chr3:80740454-80740736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 28, 98 | 
| Conread position: | 17-295 | 
| Cow position: | chr3:3985218-3985500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 102 | 
| Conread position: | 17-295 | 
| Cow position: | chr3:4050085-4050364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 28, 87 | 
| Conread position: | 17-295 | 
| Cow position: | chr3:15052061-15051768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 28, 124 | 
| Conread position: | 17-296 | 
| Cow position: | chr3:11254268-11253979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 35, 53 | 
| Conread position: | 17-296 | 
| Cow position: | chr3:43233399-43233688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 28, 37 | 
| Conread position: | 17-296 | 
| Cow position: | chr3:65969052-65969359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 17-297 | 
| Cow position: | chr3:3032296-3032595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 28, 104 | 
| Conread position: | 17-297 | 
| Cow position: | chr3:53739295-53738996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 17-297 | 
| Cow position: | chr3:68708113-68707836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 28, 65 | 
| Conread position: | 17-297 | 
| Cow position: | chr3:68881221-68880945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 28, 65 | 
| Conread position: | 17-298 | 
| Cow position: | chr3:14552769-14553059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 28, 7 | 
| Conread position: | 17-298 | 
| Cow position: | chr3:14601821-14601525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 17-298 | 
| Cow position: | chr3:24352751-24353027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 44, 37 | 
| Conread position: | 17-298 | 
| Cow position: | chr3:24468488-24468197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 28, 54 | 
| Conread position: | 17-299 | 
| Cow position: | chr3:22221210-22221514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 28, 225 | 
| Conread position: | 17-300 | 
| Cow position: | chr3:72342135-72342437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-300 | 
| Cow position: | chr3:77365407-77365103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-301 | 
| Cow position: | chr3:30179972-30180274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 17-301 | 
| Cow position: | chr3:67520281-67519987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 33, 224 | 
| Conread position: | 17-301 | 
| Cow position: | chr3:71238047-71238340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 28, 64 | 
| Conread position: | 17-301 | 
| Cow position: | chr3:83490977-83491270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 152 | 
| Conread position: | 17-302 | 
| Cow position: | chr3:64281041-64280749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 25, 183 | 
| Conread position: | 17-304 | 
| Cow position: | chr3:27274420-27274720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 28, 122 | 
| Conread position: | 17-304 | 
| Cow position: | chr3:34669836-34669560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 35, 90 | 
| Conread position: | 17-304 | 
| Cow position: | chr3:48468073-48468370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 31, 45 | 
| Conread position: | 17-304 | 
| Cow position: | chr3:53270720-53271026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 17-304 | 
| Cow position: | chr3:55712322-55712625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-304 | 
| Cow position: | chr3:61539694-61539990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 28, 126 | 
| Conread position: | 17-304 | 
| Cow position: | chr3:68586911-68587212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 28, 131 | 
| Conread position: | 17-305 | 
| Cow position: | chr3:49482816-49482520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 31, 45 | 
| Conread position: | 17-305 | 
| Cow position: | chr3:64172335-64172617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 65, 16 | 
| Conread position: | 17-305 | 
| Cow position: | chr3:76922772-76922479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 28, 91 | 
| Conread position: | 17-307 | 
| Cow position: | chr3:23920538-23920229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 17-307 | 
| Cow position: | chr3:32787350-32787658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 31, 185 | 
| Conread position: | 17-312 | 
| Cow position: | chr3:18067026-18067333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 28, 108 | 
| Conread position: | 17-313 | 
| Cow position: | chr3:54739998-54739700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 28, 129 | 
| Conread position: | 17-316 | 
| Cow position: | chr3:8061018-8061325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 28, 36 | 
| Conread position: | 17-318 | 
| Cow position: | chr3:73237085-73237390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 28, 8 | 
| Conread position: | 17-323 | 
| Cow position: | chr3:1517622-1517309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 45, 219 | 
| Conread position: | 18-203 | 
| Cow position: | chr3:72675984-72676171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 18-211 | 
| Cow position: | chr3:38691515-38691318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 27, 54 | 
| Conread position: | 18-213 | 
| Cow position: | chr3:8393828-8394032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 18-217 | 
| Cow position: | chr3:33693709-33693915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 27, 74 | 
| Conread position: | 18-227 | 
| Cow position: | chr3:67930291-67930081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 27, 119 | 
| Conread position: | 18-228 | 
| Cow position: | chr3:67704434-67704651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 18-229 | 
| Cow position: | chr3:58540635-58540416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 27, 64 | 
| Conread position: | 18-229 | 
| Cow position: | chr3:70401793-70402002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 30, 53 | 
| Conread position: | 18-231 | 
| Cow position: | chr3:4319603-4319820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 18-231 | 
| Cow position: | chr3:8733457-8733251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 27, 37 | 
| Conread position: | 18-231 | 
| Cow position: | chr3:84175934-84175714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 18-233 | 
| Cow position: | chr3:53113065-53113287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 18-235 | 
| Cow position: | chr3:55983986-55984212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 32, 142 | 
| Conread position: | 18-244 | 
| Cow position: | chr3:10958351-10958120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 27, 220 | 
| Conread position: | 18-280 | 
| Cow position: | chr3:49327833-49328103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 27, 190 | 
| Conread position: | 18-287 | 
| Cow position: | chr3:65019974-65019676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 18-289 | 
| Cow position: | chr3:54434866-54435147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 37, 102 | 
| Conread position: | 18-290 | 
| Cow position: | chr3:19711443-19711158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 27, 70 | 
| Conread position: | 18-291 | 
| Cow position: | chr3:76268087-76267794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 18-292 | 
| Cow position: | chr3:25477706-25477973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 27, 14 | 
| Conread position: | 18-292 | 
| Cow position: | chr3:60389659-60389933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 117, 27 | 
| Conread position: | 18-293 | 
| Cow position: | chr3:71231290-71231580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 27, 52 | 
| Conread position: | 18-294 | 
| Cow position: | chr3:83215151-83215452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 18-295 | 
| Cow position: | chr3:20993703-20993979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 53, 84 | 
| Conread position: | 18-295 | 
| Cow position: | chr3:49461038-49460743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 27, 278 | 
| Conread position: | 18-295 | 
| Cow position: | chr3:59474012-59474304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 15 | 
| Conread position: | 18-296 | 
| Cow position: | chr3:73467515-73467811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 34, 258 | 
| Conread position: | 18-301 | 
| Cow position: | chr3:19792785-19793087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 27, 167 | 
| Conread position: | 18-304 | 
| Cow position: | chr3:2198775-2199057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 33, 156 | 
| Conread position: | 18-304 | 
| Cow position: | chr3:31225330-31225616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 27, 53 | 
| Conread position: | 18-304 | 
| Cow position: | chr3:53910004-53910299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 63, 27 | 
| Conread position: | 18-305 | 
| Cow position: | chr3:21015069-21014758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 19-156 | 
| Cow position: | chr3:32184128-32183985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 19-212 | 
| Cow position: | chr3:57760392-57760587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 19-232 | 
| Cow position: | chr3:74234083-74234295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 26, 46 | 
| Conread position: | 19-244 | 
| Cow position: | chr3:55010271-55010050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 26, 97 | 
| Conread position: | 19-244 | 
| Cow position: | chr3:70762230-70762002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 26, 118 | 
| Conread position: | 19-285 | 
| Cow position: | chr3:20802730-20802466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 45, 114 | 
| Conread position: | 19-286 | 
| Cow position: | chr3:56476573-56476849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 55, 27 | 
| Conread position: | 19-287 | 
| Cow position: | chr3:51578428-51578147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 26, 52 | 
| Conread position: | 19-289 | 
| Cow position: | chr3:54506596-54506884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 26, 222 | 
| Conread position: | 19-293 | 
| Cow position: | chr3:18059594-18059887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 19-294 | 
| Cow position: | chr3:45881796-45882082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 26, 51 | 
| Conread position: | 19-306 | 
| Cow position: | chr3:29813137-29813420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 26, 98 | 
| Conread position: | 19-307 | 
| Cow position: | chr3:51033263-51033569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 62, 26 | 
| Conread position: | 20-230 | 
| Cow position: | chr3:1830681-1830469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 25, 72 | 
| Conread position: | 20-231 | 
| Cow position: | chr3:59621753-59621540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 20-231 | 
| Cow position: | chr3:71497250-71497030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 20-231 | 
| Cow position: | chr3:74134593-74134814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 20-273 | 
| Cow position: | chr3:7566531-7566259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 20-283 | 
| Cow position: | chr3:60597435-60597709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 25, 120 | 
| Conread position: | 20-288 | 
| Cow position: | chr3:29360252-29359987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 25, 115 | 
| Conread position: | 20-289 | 
| Cow position: | chr3:15751827-15751545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 25, 93 | 
| Conread position: | 20-291 | 
| Cow position: | chr3:29596285-29596576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 50, 25 | 
| Conread position: | 20-294 | 
| Cow position: | chr3:3656407-3656699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 20-297 | 
| Cow position: | chr3:42480510-42480781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 28, 83 | 
| Conread position: | 20-298 | 
| Cow position: | chr3:17058647-17058360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 25, 61 | 
| Conread position: | 20-298 | 
| Cow position: | chr3:48810745-48810451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 61, 25 | 
| Conread position: | 20-318 | 
| Cow position: | chr3:65058595-65058907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 52 | 
| Conread position: | 21-202 | 
| Cow position: | chr3:80468781-80468599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 24, 144 | 
| Conread position: | 21-288 | 
| Cow position: | chr3:52652187-52651903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 25-209 | 
| Cow position: | chr3:59101728-59101913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 20, 109 | 
| Conread position: | 25-230 | 
| Cow position: | chr3:17222245-17222034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 51, 21 | 
| Conread position: | 25-243 | 
| Cow position: | chr3:3316914-3316696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 20, 60 | 
| Conread position: | 25-244 | 
| Cow position: | chr3:73708946-73709168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 20, 176 | 
| Conread position: | 25-298 | 
| Cow position: | chr3:73764297-73764028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 90 | 
| Conread position: | 26-203 | 
| Cow position: | chr3:79292729-79292908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 26-212 | 
| Cow position: | chr3:58973199-58973384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 36, 19 | 
| Conread position: | 26-286 | 
| Cow position: | chr3:28908304-28908041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 19, 195 | 
| Conread position: | 26-291 | 
| Cow position: | chr3:60264818-60264543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 19, 254 | 
| Conread position: | 26-311 | 
| Cow position: | chr3:22165518-22165212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 28-304 | 
| Cow position: | chr3:77082125-77081841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 17, 219 | 
| Conread position: | 29-213 | 
| Cow position: | chr3:59588422-59588600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 16, 33 | 
| Conread position: | 29-301 | 
| Cow position: | chr3:23471564-23471273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 29-304 | 
| Cow position: | chr3:3818697-3818957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 16, 77 | 
| Conread position: | 29-352 | 
| Cow position: | chr3:65236928-65237267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 16, 312 | 
| Conread position: | 31-298 | 
| Cow position: | chr3:36160289-36160012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 40, 15 | 
| Conread position: | 32-283 | 
| Cow position: | chr3:74533254-74533506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 13, 180 | 
| Conread position: | 32-289 | 
| Cow position: | chr3:48362982-48363247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 13, 85 | 
| Conread position: | 32-294 | 
| Cow position: | chr3:75778156-75777886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 32-295 | 
| Cow position: | chr3:21081470-21081196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 13, 105 | 
| Conread position: | 34-231 | 
| Cow position: | chr3:17935031-17934831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 42, 179 | 
| Conread position: | 34-310 | 
| Cow position: | chr3:37485892-37485621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 19, 188 | 
| Conread position: | 35-217 | 
| Cow position: | chr3:17895751-17895941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 15, 118 | 
| Conread position: | 35-244 | 
| Cow position: | chr3:14546910-14547120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 39, 139 | 
| Conread position: | 35-297 | 
| Cow position: | chr3:58527302-58527563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 10, 35 | 
| Conread position: | 35-298 | 
| Cow position: | chr3:18725731-18725476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 10, 35 | 
| Conread position: | 35-301 | 
| Cow position: | chr3:9074435-9074173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 37, 11 | 
| Conread position: | 35-303 | 
| Cow position: | chr3:81087724-81087454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 10, 36 | 
| Conread position: | 35-312 | 
| Cow position: | chr3:35153524-35153809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 10, 210 | 
| Conread position: | 35-427 | 
| Cow position: | chr3:26904019-26904419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 10, 198 | 
| Conread position: | 36-232 | 
| Cow position: | chr3:46006105-46005914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 9, 44 | 
| Conread position: | 36-244 | 
| Cow position: | chr3:23203325-23203108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 29, 142 | 
| Conread position: | 37-245 | 
| Cow position: | chr3:57577608-57577819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 15, 25 | 
| Conread position: | 37-293 | 
| Cow position: | chr3:23804427-23804684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 8, 92 | 
| Conread position: | 37-307 | 
| Cow position: | chr3:40100797-40100534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 104, 29 | 
| Conread position: | 38-211 | 
| Cow position: | chr3:49382859-49383037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 38-213 | 
| Cow position: | chr3:83928160-83928336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 13, 17 | 
| Conread position: | 38-216 | 
| Cow position: | chr3:74088786-74088608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 43, 8 | 
| Conread position: | 38-243 | 
| Cow position: | chr3:31350194-31349988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 7, 172 | 
| Conread position: | 38-244 | 
| Cow position: | chr3:27976614-27976402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 27, 206 | 
| Conread position: | 38-244 | 
| Cow position: | chr3:84250633-84250428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 10, 105 | 
| Conread position: | 38-274 | 
| Cow position: | chr3:82056197-82055965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 7, 33 | 
| Conread position: | 38-290 | 
| Cow position: | chr3:39873786-39873529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 7, 84 | 
| Conread position: | 38-297 | 
| Cow position: | chr3:48459421-48459143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 39-215 | 
| Cow position: | chr3:58767173-58767355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 39-301 | 
| Cow position: | chr3:53875848-53875572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 100, 38 | 
| Conread position: | 39-303 | 
| Cow position: | chr3:34871478-34871761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 23, 131 | 
| Conread position: | 40-209 | 
| Cow position: | chr3:38347108-38347276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 35, 96 | 
| Conread position: | 40-212 | 
| Cow position: | chr3:53704052-53703875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 22, 161 | 
| Conread position: | 40-225 | 
| Cow position: | chr3:74900724-74900541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 41, 31 | 
| Conread position: | 40-231 | 
| Cow position: | chr3:83988445-83988640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 32, 123 | 
| Conread position: | 40-253 | 
| Cow position: | chr3:79645526-79645296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 40-293 | 
| Cow position: | chr3:64196738-64197007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 40-311 | 
| Cow position: | chr3:9663257-9662968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 41-230 | 
| Cow position: | chr3:66631437-66631244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 7, 22 | 
| Conread position: | 41-290 | 
| Cow position: | chr3:6182298-6182054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 172, 27 | 
| Conread position: | 41-296 | 
| Cow position: | chr3:21867123-21866853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 41-302 | 
| Cow position: | chr3:31309440-31309163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 41-316 | 
| Cow position: | chr3:59604760-59605047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 32, 97 | 
| Conread position: | 43-283 | 
| Cow position: | chr3:56483429-56483673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 19, 185 | 
| Conread position: | 46-244 | 
| Cow position: | chr3:40145387-40145588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 24, 39 | 
| Conread position: | 46-244 | 
| Cow position: | chr3:47316460-47316257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 15, 85 | 
| Conread position: | 46-245 | 
| Cow position: | chr3:48478112-48477917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 29, 71 | 
| Conread position: | 46-301 | 
| Cow position: | chr3:59299496-59299763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 46-302 | 
| Cow position: | chr3:76269817-76270079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 92, 24 | 
| Conread position: | 46-304 | 
| Cow position: | chr3:58134767-58134490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 46-307 | 
| Cow position: | chr3:54481883-54481605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 47-201 | 
| Cow position: | chr3:81277549-81277390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 47-244 | 
| Cow position: | chr3:10668958-10668758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 18, 90 | 
| Conread position: | 47-289 | 
| Cow position: | chr3:82366055-82366307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 118, 22 | 
| Conread position: | 48-212 | 
| Cow position: | chr3:11640650-11640822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 50-300 | 
| Cow position: | chr3:3037004-3036752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 24, 180 | 
| Conread position: | 51-215 | 
| Cow position: | chr3:16254904-16254749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 51-285 | 
| Cow position: | chr3:15160451-15160691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 87, 29 | 
| Conread position: | 51-292 | 
| Cow position: | chr3:41550452-41550213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 17, 121 | 
| Conread position: | 51-301 | 
| Cow position: | chr3:54551789-54551520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 21, 108 | 
| Conread position: | 52-287 | 
| Cow position: | chr3:35074809-35075048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 32, 19 | 
| Conread position: | 54-213 | 
| Cow position: | chr3:55085245-55085080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 10, 159 | 
| Conread position: | 54-226 | 
| Cow position: | chr3:28735585-28735408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 27, 22 | 
| Conread position: | 55-287 | 
| Cow position: | chr3:17134266-17134507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 26, 6 | 
| Conread position: | 55-301 | 
| Cow position: | chr3:39248093-39247842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 82, 207 | 
| Conread position: | 56-286 | 
| Cow position: | chr3:68303250-68303493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 83, 24 | 
| Conread position: | 58-305 | 
| Cow position: | chr3:46792318-46792577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 59-231 | 
| Cow position: | chr3:56704386-56704213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 11, 22 | 
| Conread position: | 59-244 | 
| Cow position: | chr3:2483936-2484122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 10, 154 | 
| Conread position: | 60-231 | 
| Cow position: | chr3:36913987-36914161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 25, 10 | 
| Conread position: | 60-298 | 
| Cow position: | chr3:48900395-48900143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 154, 20 | 
| Conread position: | 61-244 | 
| Cow position: | chr3:16752322-16752133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 18, 178 | 
| Conread position: | 61-298 | 
| Cow position: | chr3:54067734-54067981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 79, 54 | 
| Conread position: | 61-302 | 
| Cow position: | chr3:13380340-13380086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 61-321 | 
| Cow position: | chr3:45211235-45211513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 15, 240 | 
| Conread position: | 62-312 | 
| Cow position: | chr3:2025134-2025405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 63-308 | 
| Cow position: | chr3:20841935-20841682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 66-296 | 
| Cow position: | chr3:76024449-76024688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 63, 96 | 
| Conread position: | 66-310 | 
| Cow position: | chr3:53904398-53904634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 15, 89 | 
| Conread position: | 69-231 | 
| Cow position: | chr3:20515873-20515708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 69-287 | 
| Cow position: | chr3:33252944-33252716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 69-291 | 
| Cow position: | chr3:3556488-3556729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 69-295 | 
| Cow position: | chr3:5040359-5040119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 138, 9 | 
| Conread position: | 70-211 | 
| Cow position: | chr3:57877512-57877654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 70-244 | 
| Cow position: | chr3:84174246-84174425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 70-301 | 
| Cow position: | chr3:69650944-69650708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 70-304 | 
| Cow position: | chr3:51609238-51608990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 69, 50 | 
| Conread position: | 71-207 | 
| Cow position: | chr3:11606260-11606404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 71-212 | 
| Cow position: | chr3:68059262-68059403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 66, 122 | 
| Conread position: | 71-228 | 
| Cow position: | chr3:2637873-2638031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 71-233 | 
| Cow position: | chr3:41652322-41652487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 71-244 | 
| Cow position: | chr3:38783552-38783729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 19, 166 | 
| Conread position: | 71-274 | 
| Cow position: | chr3:74787378-74787588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 144, 31 | 
| Conread position: | 71-285 | 
| Cow position: | chr3:23753447-23753658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 161, 47 | 
| Conread position: | 71-286 | 
| Cow position: | chr3:56949142-56948921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 10, 193 | 
| Conread position: | 71-296 | 
| Cow position: | chr3:71423605-71423384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 10, 60 | 
| Conread position: | 71-303 | 
| Cow position: | chr3:83889194-83889443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 66, 56 | 
| Conread position: | 71-309 | 
| Cow position: | chr3:55819705-55819947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 66, 99 | 
| Conread position: | 72-193 | 
| Cow position: | chr3:23444941-23444818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 72-211 | 
| Cow position: | chr3:11292299-11292160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 66, 7 | 
| Conread position: | 72-234 | 
| Cow position: | chr3:21997841-21997679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 9, 139 | 
| Conread position: | 72-287 | 
| Cow position: | chr3:18459580-18459361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 9, 18 | 
| Conread position: | 72-291 | 
| Cow position: | chr3:30357470-30357689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 61, 81 | 
| Conread position: | 72-293 | 
| Cow position: | chr3:31804818-31804588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 53, 121 | 
| Conread position: | 72-297 | 
| Cow position: | chr3:15153639-15153875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 72-299 | 
| Cow position: | chr3:11281713-11281957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 72-304 | 
| Cow position: | chr3:40213086-40212841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 9, 36 | 
| Conread position: | 72-304 | 
| Cow position: | chr3:81234337-81234581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 74-304 | 
| Cow position: | chr3:79271763-79271515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 7, 171 | 
| Conread position: | 79-231 | 
| Cow position: | chr3:25691983-25692133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 19, 52 | 
| Conread position: | 80-212 | 
| Cow position: | chr3:15192542-15192669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 95, 37 | 
| Conread position: | 80-214 | 
| Cow position: | chr3:67959960-67959829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 80-228 | 
| Cow position: | chr3:21641944-21642092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 80-231 | 
| Cow position: | chr3:28258051-28258201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 53, 104 | 
| Conread position: | 80-231 | 
| Cow position: | chr3:59828437-59828285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 80-271 | 
| Cow position: | chr3:39988279-39988092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 137, 23 | 
| Conread position: | 80-287 | 
| Cow position: | chr3:3698615-3698820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 53, 89 | 
| Conread position: | 80-289 | 
| Cow position: | chr3:52456874-52457088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 131, 47 | 
| Conread position: | 80-291 | 
| Cow position: | chr3:74644513-74644739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 28, 39 | 
| Conread position: | 80-294 | 
| Cow position: | chr3:53384324-53384096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 57, 173 | 
| Conread position: | 80-301 | 
| Cow position: | chr3:15973522-15973760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 80-304 | 
| Cow position: | chr3:11229409-11229178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 58, 185 | 
| Conread position: | 81-210 | 
| Cow position: | chr3:58940083-58940212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 57, 29 | 
| Conread position: | 81-231 | 
| Cow position: | chr3:64373199-64373048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 81-287 | 
| Cow position: | chr3:22889060-22888838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 81-287 | 
| Cow position: | chr3:79272616-79272400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 81-305 | 
| Cow position: | chr3:28897063-28896829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 13, 35 | 
| Conread position: | 82-244 | 
| Cow position: | chr3:39996933-39996770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 52, 130 | 
| Conread position: | 82-288 | 
| Cow position: | chr3:54905576-54905784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 148, 45 | 
| Conread position: | 82-304 | 
| Cow position: | chr3:35624586-35624350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 61, 7 | 
| Conread position: | 83-286 | 
| Cow position: | chr3:29828189-29827992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 51, 134 | 
| Conread position: | 83-296 | 
| Cow position: | chr3:4036127-4035923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 45, 112 | 
| Conread position: | 83-298 | 
| Cow position: | chr3:5305757-5305990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 84-245 | 
| Cow position: | chr3:6728370-6728205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 84-287 | 
| Cow position: | chr3:4120406-4120195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 84-299 | 
| Cow position: | chr3:10732850-10733066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 25, 113 | 
| Conread position: | 84-304 | 
| Cow position: | chr3:41863584-41863817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 86-222 | 
| Cow position: | chr3:8814150-8814014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 52, 8 | 
| Conread position: | 86-297 | 
| Cow position: | chr3:84137853-84137627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 89-295 | 
| Cow position: | chr3:28902794-28902578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 48, 113 | 
| Conread position: | 89-297 | 
| Cow position: | chr3:42967413-42967206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 49, 70 | 
| Conread position: | 89-298 | 
| Cow position: | chr3:18831386-18831606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 90-221 | 
| Cow position: | chr3:11705217-11705351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 90-244 | 
| Cow position: | chr3:70756675-70756518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 48, 16 | 
| Conread position: | 90-289 | 
| Cow position: | chr3:46559749-46559538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 90-293 | 
| Cow position: | chr3:44959908-44960127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 91-293 | 
| Cow position: | chr3:24596456-24596250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 48, 142 | 
| Conread position: | 92-304 | 
| Cow position: | chr3:38828727-38828944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 47, 86 | 
| Conread position: | 93-244 | 
| Cow position: | chr3:20021238-20021389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 45, 140 | 
| Conread position: | 94-332 | 
| Cow position: | chr3:32610234-32610466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 126, 36 | 
| Conread position: | 96-295 | 
| Cow position: | chr3:39812023-39812243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 85, 34 | 
| Conread position: | 96-308 | 
| Cow position: | chr3:7381857-7381635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 117, 40 | 
| Conread position: | 98-283 | 
| Cow position: | chr3:80023335-80023143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 115, 47 | 
| Conread position: | 98-305 | 
| Cow position: | chr3:28323191-28323403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 20, 30 | 
| Conread position: | 98-305 | 
| Cow position: | chr3:76056311-76056092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 100-244 | 
| Cow position: | chr3:84807352-84807204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 100-292 | 
| Cow position: | chr3:75966805-75966601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 89, 35 | 
| Conread position: | 100-293 | 
| Cow position: | chr3:27246983-27246785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 101-292 | 
| Cow position: | chr3:32376791-32376994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 37, 26 | 
| Conread position: | 101-292 | 
| Cow position: | chr3:47199150-47198944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 42, 173 | 
| Conread position: | 103-244 | 
| Cow position: | chr3:61024044-61023899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 103-244 | 
| Cow position: | chr3:70402623-70402759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 36, 64 | 
| Conread position: | 103-298 | 
| Cow position: | chr3:59947644-59947855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 104-244 | 
| Cow position: | chr3:41366730-41366586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 105-291 | 
| Cow position: | chr3:59681923-59681727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 105-293 | 
| Cow position: | chr3:8526383-8526197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 140, 100 | 
| Conread position: | 105-296 | 
| Cow position: | chr3:50350988-50350793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 33, 100 | 
| Conread position: | 106-231 | 
| Cow position: | chr3:61133621-61133746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 31, 8 | 
| Conread position: | 106-301 | 
| Cow position: | chr3:23037527-23037319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 32, 96 | 
| Conread position: | 106-308 | 
| Cow position: | chr3:28884179-28883964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 33, 74 | 
| Conread position: | 107-292 | 
| Cow position: | chr3:54557657-54557847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 31, 136 | 
| Conread position: | 107-309 | 
| Cow position: | chr3:25038009-25037805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 32, 92 | 
| Conread position: | 108-304 | 
| Cow position: | chr3:22094617-22094419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 16, 103 | 
| Conread position: | 109-238 | 
| Cow position: | chr3:15660305-15660178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 104, 20 | 
| Conread position: | 109-309 | 
| Cow position: | chr3:59317687-59317902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 29, 69 | 
| Conread position: | 114-296 | 
| Cow position: | chr3:62186141-62186343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 115-211 | 
| Cow position: | chr3:59617074-59616977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 98 | 
| Alignm identity: | 82 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 117-244 | 
| Cow position: | chr3:35582833-35582962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 117-244 | 
| Cow position: | chr3:83199504-83199634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 117-294 | 
| Cow position: | chr3:59885533-59885715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 33, 24 | 
| Conread position: | 117-298 | 
| Cow position: | chr3:15859386-15859194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 21, 73 | 
| Conread position: | 117-301 | 
| Cow position: | chr3:3164117-3163925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 22, 82 | 
| Conread position: | 117-301 | 
| Cow position: | chr3:32127412-32127228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 21, 93 | 
| Conread position: | 120-292 | 
| Cow position: | chr3:12899944-12899764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 19, 45 | 
| Conread position: | 120-311 | 
| Cow position: | chr3:31352879-31352684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 122-298 | 
| Cow position: | chr3:47284811-47284986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 12, 85 | 
| Conread position: | 122-306 | 
| Cow position: | chr3:2016433-2016627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 124-304 | 
| Cow position: | chr3:77653928-77654113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 127-294 | 
| Cow position: | chr3:73514045-73513880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 11, 75 | 
| Conread position: | 130-304 | 
| Cow position: | chr3:64910090-64909901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 132-312 | 
| Cow position: | chr3:79207694-79207513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 141, 108 | 
| Conread position: | 136-244 | 
| Cow position: | chr3:68624230-68624340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 93, 0 | 
Show alignments to all cow chromosomes.
