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Cow genome map

           
Conread name:
           
rcbl0_009068.y1
        

               
Conread position:
               
5-215
               

               
Cow position:
               
chr4:64040015-64040225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr4:13668728-13668415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr4:22101364-22101031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
7-132
               

               
Cow position:
               
chr4:11671351-11671477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
7-212
               

               
Cow position:
               
chr4:39128431-39128643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 124
               

               
Conread position:
               
7-217
               

               
Cow position:
               
chr4:11897401-11897195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
7-230
               

               
Cow position:
               
chr4:37502718-37502937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
7-231
               

               
Cow position:
               
chr4:36893254-36893485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
7-231
               

               
Cow position:
               
chr4:37675512-37675739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
7-231
               

               
Cow position:
               
chr4:41301093-41300871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
7-244
               

               
Cow position:
               
chr4:19501191-19500950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
7-280
               

               
Cow position:
               
chr4:34630790-34631092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr4:47262432-47262734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr4:16762832-16762519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr4:49794569-49794853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
8-243
               

               
Cow position:
               
chr4:36290527-36290758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
9-231
               

               
Cow position:
               
chr4:59377813-59378034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
9-289
               

               
Cow position:
               
chr4:29709865-29709584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
10-293
               

               
Cow position:
               
chr4:44184211-44183922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
10-316
               

               
Cow position:
               
chr4:51727976-51728295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
11-212
               

               
Cow position:
               
chr4:69543084-69543288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
11-244
               

               
Cow position:
               
chr4:15904999-15905243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
11-244
               

               
Cow position:
               
chr4:56590942-56591177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
11-244
               

               
Cow position:
               
chr4:59277575-59277337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
11-287
               

               
Cow position:
               
chr4:7043922-7043625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
11-290
               

               
Cow position:
               
chr4:27344774-27344487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
11-292
               

               
Cow position:
               
chr4:27276644-27276348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
11-293
               

               
Cow position:
               
chr4:19313912-19314185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 210
               

               
Conread position:
               
11-294
               

               
Cow position:
               
chr4:30974241-30974533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
11-296
               

               
Cow position:
               
chr4:37935383-37935101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
34, 207
               

               
Conread position:
               
11-300
               

               
Cow position:
               
chr4:61066675-61066958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
11-314
               

               
Cow position:
               
chr4:52748557-52748243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
13-213
               

               
Cow position:
               
chr4:51784081-51784286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
14-198
               

               
Cow position:
               
chr4:33395796-33395606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
16-231
               

               
Cow position:
               
chr4:26400868-26401081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
16-244
               

               
Cow position:
               
chr4:62317351-62317586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
16-301
               

               
Cow position:
               
chr4:12560936-12561225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
17-182
               

               
Cow position:
               
chr4:54930513-54930346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 125
               

               
Conread position:
               
17-194
               

               
Cow position:
               
chr4:65432055-65432238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
17-199
               

               
Cow position:
               
chr4:18107251-18107067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr4:51729859-51730046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
17-210
               

               
Cow position:
               
chr4:41186002-41185816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 112
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr4:20825-21017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr4:45563649-45563851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr4:10056120-10056310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr4:13222276-13222081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
28, 101
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr4:25879305-25879496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
17-215
               

               
Cow position:
               
chr4:3850459-3850660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-215
               

               
Cow position:
               
chr4:36577723-36577518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
17-215
               

               
Cow position:
               
chr4:45589692-45589492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
17-222
               

               
Cow position:
               
chr4:62772018-62771805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 197
               

               
Conread position:
               
17-224
               

               
Cow position:
               
chr4:45596123-45595914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
17-225
               

               
Cow position:
               
chr4:47348734-47348945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
17-229
               

               
Cow position:
               
chr4:13974062-13973847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
17-229
               

               
Cow position:
               
chr4:34503199-34503419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr4:16814299-16814506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr4:32726133-32726347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 194
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr4:46591572-46591792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr4:63349568-63349365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 53
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr4:65265404-65265180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr4:18095763-18095548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr4:19322175-19321955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 200
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr4:30791879-30792093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
43, 89
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr4:44782280-44782499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr4:45367643-45367864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr4:45775433-45775213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr4:65815798-65815583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
17-232
               

               
Cow position:
               
chr4:48173046-48173264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
17-233
               

               
Cow position:
               
chr4:13941369-13941583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
28, 114
               

               
Conread position:
               
17-236
               

               
Cow position:
               
chr4:54190995-54191219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
17-241
               

               
Cow position:
               
chr4:47510297-47510520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
17-242
               

               
Cow position:
               
chr4:17052694-17052450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-242
               

               
Cow position:
               
chr4:48104658-48104430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
117, 28
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr4:12127729-12127502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr4:19430267-19430499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 200
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr4:38944351-38944121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr4:46456153-46455928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr4:54171534-54171762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr4:58248308-58248540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
17-252
               

               
Cow position:
               
chr4:25888923-25888686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
17-274
               

               
Cow position:
               
chr4:4827034-4827312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
17-274
               

               
Cow position:
               
chr4:20157510-20157254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
17-274
               

               
Cow position:
               
chr4:45073971-45074229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
17-275
               

               
Cow position:
               
chr4:31004500-31004232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-278
               

               
Cow position:
               
chr4:60897369-60897110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
17-280
               

               
Cow position:
               
chr4:23509500-23509776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
28, 124
               

               
Conread position:
               
17-280
               

               
Cow position:
               
chr4:48409363-48409100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 99
               

               
Conread position:
               
17-283
               

               
Cow position:
               
chr4:29805461-29805181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
17-283
               

               
Cow position:
               
chr4:45234958-45234702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
17-283
               

               
Cow position:
               
chr4:46494203-46494489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
17-285
               

               
Cow position:
               
chr4:45249882-45250163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr4:203235-202951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr4:23451188-23450898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr4:31348282-31348008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 173
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr4:2774624-2774916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
17-289
               

               
Cow position:
               
chr4:27530024-27530306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
17-290
               

               
Cow position:
               
chr4:34700131-34699849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 124
               

               
Conread position:
               
17-290
               

               
Cow position:
               
chr4:52779759-52780040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
17-291
               

               
Cow position:
               
chr4:3388454-3388738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
17-291
               

               
Cow position:
               
chr4:45724782-45725060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
17-292
               

               
Cow position:
               
chr4:5913441-5913167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 205
               

               
Conread position:
               
17-292
               

               
Cow position:
               
chr4:10732130-10732413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 264
               

               
Conread position:
               
17-292
               

               
Cow position:
               
chr4:16881456-16881176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
31, 155
               

               
Conread position:
               
17-292
               

               
Cow position:
               
chr4:19316095-19315810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
17-292
               

               
Cow position:
               
chr4:25370025-25370291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
224, 8
               

               
Conread position:
               
17-293
               

               
Cow position:
               
chr4:27632357-27632639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
17-293
               

               
Cow position:
               
chr4:37732576-37732281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
17-293
               

               
Cow position:
               
chr4:51769018-51769303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr4:12004132-12004408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr4:12676712-12676994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
28, 123
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr4:15635542-15635252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr4:29384315-29384042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
213, 53
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr4:37313076-37313358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr4:46136658-46136948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 181
               

               
Conread position:
               
17-295
               

               
Cow position:
               
chr4:20147092-20147385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
17-296
               

               
Cow position:
               
chr4:36929224-36929493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
17-297
               

               
Cow position:
               
chr4:961755-961463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 219
               

               
Conread position:
               
17-297
               

               
Cow position:
               
chr4:9925719-9925437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
17-297
               

               
Cow position:
               
chr4:12591304-12591018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
17-297
               

               
Cow position:
               
chr4:13284288-13284586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
9, 142
               

               
Conread position:
               
17-297
               

               
Cow position:
               
chr4:38157184-38156891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-297
               

               
Cow position:
               
chr4:41371034-41370739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr4:4084541-4084254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr4:22546931-22546640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr4:32259938-32259636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 259
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr4:32693691-32693992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-301
               

               
Cow position:
               
chr4:19584624-19584920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
17-304
               

               
Cow position:
               
chr4:13026209-13026503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
17-304
               

               
Cow position:
               
chr4:23847141-23846846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
17-305
               

               
Cow position:
               
chr4:25226857-25227143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
17-305
               

               
Cow position:
               
chr4:34369545-34369253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
28, 197
               

               
Conread position:
               
17-310
               

               
Cow position:
               
chr4:31506125-31505801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
17-313
               

               
Cow position:
               
chr4:22138324-22137999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 295
               

               
Conread position:
               
17-317
               

               
Cow position:
               
chr4:41899888-41900186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
18-136
               

               
Cow position:
               
chr4:2537100-2537221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
18-212
               

               
Cow position:
               
chr4:1495496-1495303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
18-212
               

               
Cow position:
               
chr4:43865948-43865751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 102
               

               
Conread position:
               
18-212
               

               
Cow position:
               
chr4:45738571-45738369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
18-212
               

               
Cow position:
               
chr4:55395669-55395867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 149
               

               
Conread position:
               
18-244
               

               
Cow position:
               
chr4:2602140-2602373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
18-244
               

               
Cow position:
               
chr4:33375251-33375487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 180
               

               
Conread position:
               
18-244
               

               
Cow position:
               
chr4:34383435-34383201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
37, 114
               

               
Conread position:
               
18-244
               

               
Cow position:
               
chr4:44773138-44772902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
18-244
               

               
Cow position:
               
chr4:54789547-54789780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
18-275
               

               
Cow position:
               
chr4:56570715-56570971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 194
               

               
Conread position:
               
18-283
               

               
Cow position:
               
chr4:55508337-55508073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
18-286
               

               
Cow position:
               
chr4:45837723-45837438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
18-292
               

               
Cow position:
               
chr4:19102977-19102679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr4:45583211-45582924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr4:46597286-46597553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
18-296
               

               
Cow position:
               
chr4:59785226-59785521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
18-298
               

               
Cow position:
               
chr4:11610784-11611067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
18-298
               

               
Cow position:
               
chr4:29291427-29291709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
18-298
               

               
Cow position:
               
chr4:45662601-45662313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
27, 137
               

               
Conread position:
               
19-163
               

               
Cow position:
               
chr4:35940097-35939949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
19-207
               

               
Cow position:
               
chr4:68889654-68889460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
19-212
               

               
Cow position:
               
chr4:44838986-44838789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 150
               

               
Conread position:
               
19-222
               

               
Cow position:
               
chr4:36731103-36731306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
19-231
               

               
Cow position:
               
chr4:45013255-45013054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
19-245
               

               
Cow position:
               
chr4:39458542-39458798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 170
               

               
Conread position:
               
19-247
               

               
Cow position:
               
chr4:26323646-26323884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
19-248
               

               
Cow position:
               
chr4:53100707-53100949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
19-293
               

               
Cow position:
               
chr4:45636072-45636370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr4:56239946-56239664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
19-304
               

               
Cow position:
               
chr4:52823500-52823193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
19-313
               

               
Cow position:
               
chr4:656905-656600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
20-167
               

               
Cow position:
               
chr4:39231613-39231460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
20-211
               

               
Cow position:
               
chr4:5460956-5460757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 191
               

               
Conread position:
               
20-211
               

               
Cow position:
               
chr4:10999797-10999610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
20-212
               

               
Cow position:
               
chr4:24481760-24481567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
20-229
               

               
Cow position:
               
chr4:64657386-64657180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
20-233
               

               
Cow position:
               
chr4:27755390-27755177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
20-243
               

               
Cow position:
               
chr4:17186441-17186213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
20-244
               

               
Cow position:
               
chr4:508998-508771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 198
               

               
Conread position:
               
20-280
               

               
Cow position:
               
chr4:13589998-13590272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
20-286
               

               
Cow position:
               
chr4:13327043-13326770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
20-288
               

               
Cow position:
               
chr4:44612914-44613198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
20-293
               

               
Cow position:
               
chr4:32458952-32458657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
20-297
               

               
Cow position:
               
chr4:44496280-44496564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
20-298
               

               
Cow position:
               
chr4:34641819-34641520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 177
               

               
Conread position:
               
20-304
               

               
Cow position:
               
chr4:61897625-61897343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 190
               

               
Conread position:
               
20-309
               

               
Cow position:
               
chr4:40414720-40414412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
20-311
               

               
Cow position:
               
chr4:45685375-45685671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
20-312
               

               
Cow position:
               
chr4:18756343-18756652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
22-231
               

               
Cow position:
               
chr4:19098377-19098597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
22-287
               

               
Cow position:
               
chr4:45077166-45076887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
22-292
               

               
Cow position:
               
chr4:38999339-38999613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
22-295
               

               
Cow position:
               
chr4:3837184-3837469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 200
               

               
Conread position:
               
24-290
               

               
Cow position:
               
chr4:66547855-66547568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
25-211
               

               
Cow position:
               
chr4:65175227-65175040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
25-220
               

               
Cow position:
               
chr4:66136690-66136495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
25-244
               

               
Cow position:
               
chr4:61188955-61188729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 172
               

               
Conread position:
               
25-244
               

               
Cow position:
               
chr4:68764436-68764656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
25-291
               

               
Cow position:
               
chr4:49629396-49629682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 184
               

               
Conread position:
               
25-291
               

               
Cow position:
               
chr4:53126031-53126293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
25-301
               

               
Cow position:
               
chr4:19292635-19292921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
20, 212
               

               
Conread position:
               
25-305
               

               
Cow position:
               
chr4:9681217-9681501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
26-212
               

               
Cow position:
               
chr4:61313293-61313107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
26-231
               

               
Cow position:
               
chr4:1786-1996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
29-213
               

               
Cow position:
               
chr4:5964069-5963883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr4:11380203-11380399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
29-231
               

               
Cow position:
               
chr4:12901638-12901431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
29-231
               

               
Cow position:
               
chr4:50676249-50676047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
29-273
               

               
Cow position:
               
chr4:59055946-59055693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 221
               

               
Conread position:
               
29-290
               

               
Cow position:
               
chr4:59002213-59001943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
29-293
               

               
Cow position:
               
chr4:63472155-63471892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 187
               

               
Conread position:
               
29-301
               

               
Cow position:
               
chr4:10968470-10968190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
30-288
               

               
Cow position:
               
chr4:21064955-21065218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
32-233
               

               
Cow position:
               
chr4:16594002-16594209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
32-270
               

               
Cow position:
               
chr4:44449584-44449349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
32-303
               

               
Cow position:
               
chr4:62472002-62472283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 205
               

               
Conread position:
               
32-307
               

               
Cow position:
               
chr4:60719021-60719301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 233
               

               
Conread position:
               
35-229
               

               
Cow position:
               
chr4:54921163-54920967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
35-231
               

               
Cow position:
               
chr4:65650204-65650008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
35-232
               

               
Cow position:
               
chr4:54927515-54927314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
35-275
               

               
Cow position:
               
chr4:43740464-43740711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
35-292
               

               
Cow position:
               
chr4:570717-570986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
35-297
               

               
Cow position:
               
chr4:52087852-52088110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
35-304
               

               
Cow position:
               
chr4:20142983-20142702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 119
               

               
Conread position:
               
35-312
               

               
Cow position:
               
chr4:8182715-8182417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
36-183
               

               
Cow position:
               
chr4:21173774-21173922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
36-235
               

               
Cow position:
               
chr4:48143760-48143966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 178
               

               
Conread position:
               
36-305
               

               
Cow position:
               
chr4:45626697-45626430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
37-244
               

               
Cow position:
               
chr4:25197567-25197353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
37-275
               

               
Cow position:
               
chr4:8770033-8770274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
37-297
               

               
Cow position:
               
chr4:59873358-59873628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 158
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr4:38822391-38822112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 145
               

               
Conread position:
               
38-257
               

               
Cow position:
               
chr4:24371930-24371706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
38-298
               

               
Cow position:
               
chr4:7847349-7847084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
38-298
               

               
Cow position:
               
chr4:47038695-47038973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
38-304
               

               
Cow position:
               
chr4:45705973-45706246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
39-234
               

               
Cow position:
               
chr4:19542074-19542260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
40-226
               

               
Cow position:
               
chr4:26012327-26012518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 134
               

               
Conread position:
               
40-226
               

               
Cow position:
               
chr4:26830633-26830824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 134
               

               
Conread position:
               
40-228
               

               
Cow position:
               
chr4:8704925-8705117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
40-243
               

               
Cow position:
               
chr4:66380412-66380200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
40-292
               

               
Cow position:
               
chr4:62370247-62370506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
40-305
               

               
Cow position:
               
chr4:14414413-14414142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
41-234
               

               
Cow position:
               
chr4:19323904-19324100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 179
               

               
Conread position:
               
41-296
               

               
Cow position:
               
chr4:13344468-13344737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
41-312
               

               
Cow position:
               
chr4:18974354-18974642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
11, 283
               

               
Conread position:
               
42-311
               

               
Cow position:
               
chr4:47748349-47748629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 6
               

               
Conread position:
               
46-212
               

               
Cow position:
               
chr4:69411976-69411809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
46-243
               

               
Cow position:
               
chr4:49800630-49800832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
46-294
               

               
Cow position:
               
chr4:37035298-37035054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
46-304
               

               
Cow position:
               
chr4:38946145-38946427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 261
               

               
Conread position:
               
47-244
               

               
Cow position:
               
chr4:4085181-4084972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
47-280
               

               
Cow position:
               
chr4:19708868-19709128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
47-310
               

               
Cow position:
               
chr4:19199353-19199070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 259
               

               
Conread position:
               
50-196
               

               
Cow position:
               
chr4:59008411-59008265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
54-200
               

               
Cow position:
               
chr4:41292007-41291860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
54-297
               

               
Cow position:
               
chr4:33091319-33091553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 156
               

               
Conread position:
               
55-301
               

               
Cow position:
               
chr4:47305023-47305287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
57-291
               

               
Cow position:
               
chr4:67393043-67393292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
59-244
               

               
Cow position:
               
chr4:60363302-60363489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
59-302
               

               
Cow position:
               
chr4:22907455-22907705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 228
               

               
Conread position:
               
60-230
               

               
Cow position:
               
chr4:51920494-51920668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
60-293
               

               
Cow position:
               
chr4:35638948-35638708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
65-305
               

               
Cow position:
               
chr4:40995688-40995944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
66-266
               

               
Cow position:
               
chr4:13142604-13142408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
153, 70
               

               
Conread position:
               
67-299
               

               
Cow position:
               
chr4:64029077-64029297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
68-287
               

               
Cow position:
               
chr4:33181506-33181735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
71-228
               

               
Cow position:
               
chr4:12135964-12135803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
71-290
               

               
Cow position:
               
chr4:38700194-38699980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 146
               

               
Conread position:
               
71-294
               

               
Cow position:
               
chr4:43542508-43542283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 89
               

               
Conread position:
               
71-298
               

               
Cow position:
               
chr4:28836499-28836735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 108
               

               
Conread position:
               
71-304
               

               
Cow position:
               
chr4:31177789-31178030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
71-305
               

               
Cow position:
               
chr4:7698229-7698478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
71-305
               

               
Cow position:
               
chr4:23600131-23600365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 184
               

               
Conread position:
               
72-213
               

               
Cow position:
               
chr4:63262239-63262099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
72-231
               

               
Cow position:
               
chr4:48902661-48902500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
72-234
               

               
Cow position:
               
chr4:15462289-15462123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
72-234
               

               
Cow position:
               
chr4:19256659-19256821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
72-243
               

               
Cow position:
               
chr4:38358856-38358685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
141, 64
               

               
Conread position:
               
72-286
               

               
Cow position:
               
chr4:65463536-65463322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
157, 52
               

               
Conread position:
               
72-293
               

               
Cow position:
               
chr4:37343092-37343319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 88
               

               
Conread position:
               
73-291
               

               
Cow position:
               
chr4:19597359-19597136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 171
               

               
Conread position:
               
73-296
               

               
Cow position:
               
chr4:50687896-50687664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
73-301
               

               
Cow position:
               
chr4:38350235-38349988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
73-304
               

               
Cow position:
               
chr4:32561794-32562041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
74-212
               

               
Cow position:
               
chr4:45910011-45909872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 126
               

               
Conread position:
               
74-318
               

               
Cow position:
               
chr4:20125002-20124745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
75-240
               

               
Cow position:
               
chr4:55905344-55905178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
76-293
               

               
Cow position:
               
chr4:61608996-61608769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 193
               

               
Conread position:
               
76-301
               

               
Cow position:
               
chr4:19539268-19539026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 211
               

               
Conread position:
               
76-309
               

               
Cow position:
               
chr4:44786010-44786253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
79-212
               

               
Cow position:
               
chr4:61345991-61346122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
80-212
               

               
Cow position:
               
chr4:10958710-10958847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
80-226
               

               
Cow position:
               
chr4:54854832-54854682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
80-230
               

               
Cow position:
               
chr4:11496673-11496528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
80-242
               

               
Cow position:
               
chr4:14500271-14500109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 153
               

               
Conread position:
               
80-287
               

               
Cow position:
               
chr4:1985620-1985843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
80-296
               

               
Cow position:
               
chr4:6094093-6093862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
80-297
               

               
Cow position:
               
chr4:42232050-42231831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 164
               

               
Conread position:
               
80-299
               

               
Cow position:
               
chr4:15236609-15236827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
152, 50
               

               
Conread position:
               
80-304
               

               
Cow position:
               
chr4:46560153-46560388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 86
               

               
Conread position:
               
81-213
               

               
Cow position:
               
chr4:46702684-46702551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
81-228
               

               
Cow position:
               
chr4:19456713-19456565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
81-289
               

               
Cow position:
               
chr4:31758242-31758446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 154
               

               
Conread position:
               
81-295
               

               
Cow position:
               
chr4:21063816-21063606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
57, 138
               

               
Conread position:
               
81-304
               

               
Cow position:
               
chr4:45213216-45212976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
82-298
               

               
Cow position:
               
chr4:15871756-15871538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
83-231
               

               
Cow position:
               
chr4:32272997-32272847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
83-302
               

               
Cow position:
               
chr4:13918957-13919185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
130, 47
               

               
Conread position:
               
84-230
               

               
Cow position:
               
chr4:48127542-48127689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
84-230
               

               
Cow position:
               
chr4:57932280-57932434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
85-230
               

               
Cow position:
               
chr4:27699010-27699155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
87-297
               

               
Cow position:
               
chr4:60527160-60527383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
89-287
               

               
Cow position:
               
chr4:29247219-29247007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
91-231
               

               
Cow position:
               
chr4:53819702-53819561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
91-289
               

               
Cow position:
               
chr4:61969745-61969537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
91-293
               

               
Cow position:
               
chr4:61268175-61268376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 125
               

               
Conread position:
               
92-202
               

               
Cow position:
               
chr4:68819573-68819684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
92-316
               

               
Cow position:
               
chr4:19496479-19496718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
46, 225
               

               
Conread position:
               
93-228
               

               
Cow position:
               
chr4:1236887-1236752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 106
               

               
Conread position:
               
94-305
               

               
Cow position:
               
chr4:8083812-8083598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
27, 147
               

               
Conread position:
               
97-228
               

               
Cow position:
               
chr4:45262058-45261926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 122
               

               
Conread position:
               
97-293
               

               
Cow position:
               
chr4:45752966-45752767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
97-296
               

               
Cow position:
               
chr4:17790302-17790095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
98-245
               

               
Cow position:
               
chr4:51708056-51708208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 146
               

               
Conread position:
               
98-288
               

               
Cow position:
               
chr4:60955322-60955514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
100-288
               

               
Cow position:
               
chr4:16070680-16070492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
101-302
               

               
Cow position:
               
chr4:13141100-13140905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
101-308
               

               
Cow position:
               
chr4:47284019-47283796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
101-313
               

               
Cow position:
               
chr4:47231004-47230779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 223
               

               
Conread position:
               
102-231
               

               
Cow position:
               
chr4:65805890-65806020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
102-307
               

               
Cow position:
               
chr4:56410340-56410556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
103-280
               

               
Cow position:
               
chr4:66168338-66168153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
103-318
               

               
Cow position:
               
chr4:55694174-55694394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
104-280
               

               
Cow position:
               
chr4:22482319-22482505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
104-307
               

               
Cow position:
               
chr4:53347973-53347768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
109, 34
               

               
Conread position:
               
105-295
               

               
Cow position:
               
chr4:59015590-59015780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 25
               

               
Conread position:
               
105-301
               

               
Cow position:
               
chr4:30769033-30769239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
106-286
               

               
Cow position:
               
chr4:21520577-21520758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
33, 151
               

               
Conread position:
               
107-289
               

               
Cow position:
               
chr4:479792-479608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
107-296
               

               
Cow position:
               
chr4:12867105-12867301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
109-291
               

               
Cow position:
               
chr4:56805182-56805360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 21
               

               
Conread position:
               
110-294
               

               
Cow position:
               
chr4:30691007-30691201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
136, 98
               

               
Conread position:
               
113-293
               

               
Cow position:
               
chr4:42044969-42044777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 168
               

               
Conread position:
               
117-230
               

               
Cow position:
               
chr4:54975511-54975624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
117-290
               

               
Cow position:
               
chr4:43369619-43369451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
117-303
               

               
Cow position:
               
chr4:348415-348222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
119-295
               

               
Cow position:
               
chr4:45840410-45840592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
120-231
               

               
Cow position:
               
chr4:7729424-7729312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
120-292
               

               
Cow position:
               
chr4:12052312-12052140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
120-310
               

               
Cow position:
               
chr4:25802703-25802912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
120-312
               

               
Cow position:
               
chr4:46761620-46761827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
121-292
               

               
Cow position:
               
chr4:46447168-46446989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
123-296
               

               
Cow position:
               
chr4:57590654-57590477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
123-304
               

               
Cow position:
               
chr4:22849475-22849293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
124-305
               

               
Cow position:
               
chr4:41098952-41099145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
126-304
               

               
Cow position:
               
chr4:40392834-40393020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
127-244
               

               
Cow position:
               
chr4:43579393-43579276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
129-297
               

               
Cow position:
               
chr4:19200134-19200308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
130-294
               

               
Cow position:
               
chr4:10016604-10016436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
132-303
               

               
Cow position:
               
chr4:25929242-25929419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 110
               

               
Conread position:
               
132-310
               

               
Cow position:
               
chr4:44681226-44681046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
135-290
               

               
Cow position:
               
chr4:66412215-66412378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
136-295
               

               
Cow position:
               
chr4:23271312-23271484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
143-292
               

               
Cow position:
               
chr4:66509674-66509823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 99
               

               
Conread position:
               
143-296
               

               
Cow position:
               
chr4:19558722-19558868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               
Show alignments to all cow chromosomes.