Cow genome map

Conread name: rcbl0_015095.y1

Conread position: 2-576
Cow position: chr1:77657399-77656816 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 154

Conread position: 2-577
Cow position: chr1:58419528-58418945 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 147

Conread position: 2-578
Cow position: chr1:46694053-46694637 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 145

Conread position: 3-363
Cow position: chr1:4026790-4026422 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 43, 78

Conread position: 3-367
Cow position: chr1:73756693-73756348 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 206, 113

Conread position: 3-397
Cow position: chr1:53369049-53368634 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 396

Conread position: 3-424
Cow position: chr1:40603888-40603458 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-449
Cow position: chr1:44230087-44229619 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 35

Conread position: 3-456
Cow position: chr1:27495100-27494638 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 142

Conread position: 3-487
Cow position: chr1:33442338-33442833 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 57

Conread position: 3-491
Cow position: chr1:42053721-42054218 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-561
Cow position: chr1:38418680-38418108 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 125

Conread position: 3-568
Cow position: chr1:30034153-30033558 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-568
Cow position: chr1:79255855-79255271 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 291

Conread position: 3-572
Cow position: chr1:21577415-21576818 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-576
Cow position: chr1:85774066-85773480 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 78

Conread position: 3-577
Cow position: chr1:65390424-65389828 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 354

Conread position: 3-577
Cow position: chr1:67290472-67289890 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 3-578
Cow position: chr1:14528606-14529189 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 152

Conread position: 3-579
Cow position: chr1:5012938-5013529 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 113

Conread position: 3-579
Cow position: chr1:61221281-61220701 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-579
Cow position: chr1:72987318-72986727 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-579
Cow position: chr1:79590702-79590120 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 146

Conread position: 3-579
Cow position: chr1:82370269-82369689 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 42

Conread position: 3-580
Cow position: chr1:8828883-8828289 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 137

Conread position: 3-580
Cow position: chr1:13250685-13251277 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr1:14561355-14561945 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 116

Conread position: 3-580
Cow position: chr1:18196458-18195863 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr1:33716823-33716228 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 114

Conread position: 3-580
Cow position: chr1:36645589-36646183 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr1:38712576-38711980 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr1:39234644-39235235 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr1:51980829-51980253 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 104

Conread position: 3-580
Cow position: chr1:52354812-52355404 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-580
Cow position: chr1:52434885-52434293 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 143

Conread position: 3-580
Cow position: chr1:66491439-66490849 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 3-580
Cow position: chr1:68282396-68281817 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 42

Conread position: 3-580
Cow position: chr1:68601767-68602362 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr1:71691416-71690824 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position: chr1:72087447-72086867 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 122

Conread position: 3-580
Cow position: chr1:99571732-99572298 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 143

Conread position: 3-580
Cow position: chr1:99628221-99628790 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 142

Conread position: 3-581
Cow position: chr1:3340527-3339933 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 147

Conread position: 3-581
Cow position: chr1:20544089-20543494 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 119

Conread position: 3-581
Cow position: chr1:22012102-22012694 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-581
Cow position: chr1:22253921-22253341 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 106

Conread position: 3-581
Cow position: chr1:24581243-24580673 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 196

Conread position: 3-581
Cow position: chr1:24780625-24781213 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 35

Conread position: 3-581
Cow position: chr1:50764995-50764425 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-581
Cow position: chr1:52054687-52054087 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 144

Conread position: 3-581
Cow position: chr1:57119973-57120564 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 72

Conread position: 3-581
Cow position: chr1:68845853-68846443 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 322

Conread position: 4-581
Cow position: chr1:92196835-92196244 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 143

Conread position: 6-581
Cow position: chr1:53650506-53649919 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 146

Conread position: 6-581
Cow position: chr1:67013856-67013293 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 150

Conread position: 9-366
Cow position: chr1:46885689-46885317 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 140

Conread position: 9-433
Cow position: chr1:97206211-97205774 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 137

Conread position: 9-472
Cow position: chr1:47923011-47923484 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-487
Cow position: chr1:76699886-76700383 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 9-527
Cow position: chr1:3440819-3440284 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 344

Conread position: 9-565
Cow position: chr1:19056725-19056156 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-566
Cow position: chr1:55327381-55327955 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 9-568
Cow position: chr1:51884458-51883891 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-577
Cow position: chr1:17937896-17938483 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-577
Cow position: chr1:53308801-53309388 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 142

Conread position: 9-577
Cow position: chr1:70865100-70864528 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 9-577
Cow position: chr1:85142359-85142953 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 17

Conread position: 9-578
Cow position: chr1:67006730-67006148 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 9-579
Cow position: chr1:2764986-2764385 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 143

Conread position: 9-580
Cow position: chr1:2990340-2989751 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:20528017-20527428 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 105

Conread position: 9-580
Cow position: chr1:26588805-26588218 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 325

Conread position: 9-580
Cow position: chr1:28714892-28714307 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:29038398-29037808 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 142

Conread position: 9-580
Cow position: chr1:31535708-31535120 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 9-580
Cow position: chr1:33855123-33854535 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-580
Cow position: chr1:33900396-33899813 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:46612440-46613029 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:49268737-49268152 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:56666957-56666368 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:62507388-62507981 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:69770672-69770087 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 147

Conread position: 9-580
Cow position: chr1:75403752-75403162 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-580
Cow position: chr1:77554146-77554730 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:81309218-81308629 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:83170298-83169710 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 104

Conread position: 9-580
Cow position: chr1:85776605-85777191 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 9-580
Cow position: chr1:89492384-89492962 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:93858369-93857790 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:95457208-95456620 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position: chr1:101981664-101982228 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 374
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 94

Conread position: 9-580
Cow position: chr1:102784378-102783805 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 97

Conread position: 9-580
Cow position: chr1:102815329-102814741 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 108

Conread position: 9-581
Cow position: chr1:20377751-20378329 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 27

Conread position: 9-581
Cow position: chr1:25553659-25553071 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-581
Cow position: chr1:77925338-77924748 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-581
Cow position: chr1:95474053-95474635 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-581
Cow position: chr1:99117861-99117282 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 80

Conread position: 11-578
Cow position: chr1:22790251-22789671 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 134

Conread position: 11-581
Cow position: chr1:86020501-86021073 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 57

Conread position: 12-353
Cow position: chr1:89742418-89742763 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 36, 181

Conread position: 12-398
Cow position: chr1:23041145-23040760 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 48, 101

Conread position: 12-400
Cow position: chr1:38688068-38687678 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 135

Conread position: 12-526
Cow position: chr1:56232487-56231964 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 343
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 198, 88

Conread position: 12-580
Cow position: chr1:76873733-76873150 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 137

Conread position: 12-580
Cow position: chr1:79334132-79334719 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 135

Conread position: 12-580
Cow position: chr1:82908973-82909563 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 66

Conread position: 12-580
Cow position: chr1:91105892-91105310 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 13-414
Cow position: chr1:16337253-16337657 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 134

Conread position: 13-529
Cow position: chr1:22227451-22226941 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 13-566
Cow position: chr1:9262349-9261778 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-580
Cow position: chr1:77748595-77748011 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-580
Cow position: chr1:83136787-83136210 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-581
Cow position: chr1:19145340-19145902 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 14-571
Cow position: chr1:89484949-89484376 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 34

Conread position: 14-579
Cow position: chr1:94663504-94662922 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 59

Conread position: 16-580
Cow position: chr1:73761702-73762277 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 57

Conread position: 18-561
Cow position: chr1:23577980-23578519 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 127

Conread position: 18-581
Cow position: chr1:54477649-54477060 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 129

Conread position: 20-580
Cow position: chr1:10034371-10033806 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 120

Conread position: 27-571
Cow position: chr1:42554830-42554282 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 8

Conread position: 27-575
Cow position: chr1:19483415-19483970 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 91

Conread position: 27-579
Cow position: chr1:3263825-3263258 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 120

Conread position: 27-580
Cow position: chr1:6196441-6197010 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 27-580
Cow position: chr1:10726462-10725892 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 123

Conread position: 27-580
Cow position: chr1:88327645-88328212 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 27-581
Cow position: chr1:28677882-28677325 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 41

Conread position: 28-581
Cow position: chr1:68812109-68812651 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 22

Conread position: 29-557
Cow position: chr1:4452250-4452796 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 127

Conread position: 30-472
Cow position: chr1:12465196-12465638 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 79

Conread position: 30-580
Cow position: chr1:73463801-73463234 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 83

Conread position: 31-423
Cow position: chr1:22616076-22616476 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 116

Conread position: 33-442
Cow position: chr1:77106036-77106449 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 271
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 146, 80

Conread position: 33-493
Cow position: chr1:58196622-58197099 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 43

Conread position: 33-537
Cow position: chr1:23058116-23057586 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 354
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 35

Conread position: 35-581
Cow position: chr1:61563878-61563304 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 190

Conread position: 38-566
Cow position: chr1:85338678-85338153 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 360
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 83, 263

Conread position: 38-580
Cow position: chr1:54933753-54933196 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 20

Conread position: 43-522
Cow position: chr1:86705947-86705464 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 63

Conread position: 45-577
Cow position: chr1:2744918-2744380 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 104

Conread position: 46-566
Cow position: chr1:98988607-98989145 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 101

Conread position: 50-503
Cow position: chr1:57636427-57635957 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 96

Conread position: 50-579
Cow position: chr1:57759724-57759184 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 99

Conread position: 51-487
Cow position: chr1:29901441-29901866 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 95

Conread position: 54-577
Cow position: chr1:7739536-7738985 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 92

Conread position: 55-580
Cow position: chr1:82880234-82879702 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 100

Conread position: 56-465
Cow position: chr1:44836714-44837135 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 39

Conread position: 58-557
Cow position: chr1:61283226-61282713 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 88

Conread position: 60-580
Cow position: chr1:55780673-55780139 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 86

Conread position: 69-580
Cow position: chr1:26446936-26446422 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 15

Conread position: 69-581
Cow position: chr1:82568204-82567683 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 77

Conread position: 83-581
Cow position: chr1:11873864-11874374 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 314

Conread position: 89-428
Cow position: chr1:60410739-60410388 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 89-472
Cow position: chr1:33189870-33189491 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 250
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 108, 24

Conread position: 94-377
Cow position: chr1:85152271-85151978 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 115, 62

Conread position: 98-581
Cow position: chr1:71792701-71792196 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 250

Conread position: 102-580
Cow position: chr1:61746418-61746900 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 44

Conread position: 103-570
Cow position: chr1:38544955-38545438 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 9

Conread position: 118-569
Cow position: chr1:44078676-44079139 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 28

Conread position: 149-503
Cow position: chr1:81320608-81320982 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 203

Conread position: 151-580
Cow position: chr1:31351922-31352358 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 14

Conread position: 207-517
Cow position: chr1:41515421-41515744 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 38

Conread position: 207-572
Cow position: chr1:46821260-46820890 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 100

Conread position: 207-579
Cow position: chr1:99917086-99916708 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 134

Conread position: 207-581
Cow position: chr1:70534802-70535196 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 304

Conread position: 209-581
Cow position: chr1:7200748-7200373 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 246
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 104

Conread position: 211-405
Cow position: chr1:60033278-60033466 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 119, 91

Conread position: 211-441
Cow position: chr1:86574468-86574239 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 130

Conread position: 211-512
Cow position: chr1:57946574-57946266 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 211-513
Cow position: chr1:79296446-79296142 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 92, 52

Conread position: 211-522
Cow position: chr1:6765460-6765771 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 130

Conread position: 211-524
Cow position: chr1:38401244-38400946 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 31, 70

Conread position: 211-524
Cow position: chr1:60280171-60279860 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 226

Conread position: 211-550
Cow position: chr1:34363280-34362946 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 97, 91

Conread position: 211-569
Cow position: chr1:21453267-21453610 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 153, 82

Conread position: 211-577
Cow position: chr1:100536799-100536419 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 8

Conread position: 211-579
Cow position: chr1:52371614-52371241 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 90

Conread position: 211-580
Cow position: chr1:4375161-4375516 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 91

Conread position: 211-580
Cow position: chr1:7837115-7837493 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 173

Conread position: 211-580
Cow position: chr1:24655470-24655098 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 91

Conread position: 211-580
Cow position: chr1:26838589-26838223 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 129

Conread position: 211-580
Cow position: chr1:40509604-40509992 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 211-580
Cow position: chr1:56170601-56170228 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 129

Conread position: 211-580
Cow position: chr1:61097142-61096768 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-580
Cow position: chr1:69670980-69671353 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 34

Conread position: 211-580
Cow position: chr1:73968154-73967780 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 127

Conread position: 211-580
Cow position: chr1:89112457-89112091 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 90

Conread position: 211-581
Cow position: chr1:5162703-5163074 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 112

Conread position: 211-581
Cow position: chr1:13718198-13718570 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 33

Conread position: 211-581
Cow position: chr1:45006583-45006241 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 247, 10

Conread position: 211-581
Cow position: chr1:71045146-71044774 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 226

Conread position: 211-581
Cow position: chr1:101787313-101787670 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 33

Conread position: 212-436
Cow position: chr1:60554694-60554919 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 103, 112

Conread position: 212-452
Cow position: chr1:58780038-58779808 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 97, 118

Conread position: 215-576
Cow position: chr1:53397313-53396976 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 109

Conread position: 216-456
Cow position: chr1:15049436-15049206 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 153, 20

Conread position: 216-581
Cow position: chr1:72139828-72139459 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 55

Conread position: 217-399
Cow position: chr1:100435943-100435765 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 111

Conread position: 217-518
Cow position: chr1:9438665-9438961 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 54

Conread position: 217-579
Cow position: chr1:61204020-61203653 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 123

Conread position: 217-580
Cow position: chr1:42740332-42739964 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 123

Conread position: 217-580
Cow position: chr1:56746520-56746152 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 125

Conread position: 217-580
Cow position: chr1:81302770-81302384 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 123

Conread position: 218-580
Cow position: chr1:62928104-62927737 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 111

Conread position: 218-581
Cow position: chr1:77166463-77166106 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 104

Conread position: 219-570
Cow position: chr1:90622599-90622946 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 46

Conread position: 224-577
Cow position: chr1:42875031-42875385 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 225

Conread position: 224-579
Cow position: chr1:53371997-53371625 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 92

Conread position: 227-513
Cow position: chr1:60308507-60308228 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 214, 28

Conread position: 227-537
Cow position: chr1:15368001-15368326 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 28

Conread position: 232-441
Cow position: chr1:21132238-21132444 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 105, 70

Conread position: 232-473
Cow position: chr1:56935467-56935713 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 109

Conread position: 232-537
Cow position: chr1:7790190-7790492 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 92

Conread position: 232-537
Cow position: chr1:59013775-59014085 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 88

Conread position: 232-580
Cow position: chr1:63240312-63239962 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 113

Conread position: 232-581
Cow position: chr1:61747832-61748183 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 104

Conread position: 235-533
Cow position: chr1:69286794-69287092 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 64, 10

Conread position: 237-579
Cow position: chr1:52379909-52379562 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 205
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 99, 64

Conread position: 240-580
Cow position: chr1:93850914-93850569 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 83

Conread position: 243-577
Cow position: chr1:44127243-44127570 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 81

Conread position: 244-522
Cow position: chr1:24921909-24922182 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 125, 27

Conread position: 250-580
Cow position: chr1:68818308-68818641 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 87

Conread position: 260-556
Cow position: chr1:56475587-56475292 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 6

Conread position: 260-581
Cow position: chr1:21678383-21678067 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 42

Conread position: 265-581
Cow position: chr1:55145649-55145312 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 266-580
Cow position: chr1:3382732-3383051 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 52

Conread position: 270-551
Cow position: chr1:41517281-41517561 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 92

Conread position: 275-568
Cow position: chr1:70387751-70388047 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 27

Conread position: 293-580
Cow position: chr1:43448951-43449244 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 14, 36

Conread position: 298-580
Cow position: chr1:31341855-31342131 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 71, 24

Conread position: 303-580
Cow position: chr1:38279189-38279472 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 27

Conread position: 306-577
Cow position: chr1:37541764-37542036 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 33

Conread position: 307-580
Cow position: chr1:86592758-86593036 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 15

Conread position: 308-580
Cow position: chr1:99581912-99582189 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 61, 21

Conread position: 317-513
Cow position: chr1:90391344-90391543 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 113, 5

Conread position: 322-581
Cow position: chr1:72864480-72864217 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 8, 183

Conread position: 330-580
Cow position: chr1:7324596-7324339 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 12, 207

Conread position: 330-580
Cow position: chr1:11288862-11289121 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 87

Conread position: 330-581
Cow position: chr1:73870378-73870119 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 225

Conread position: 333-580
Cow position: chr1:29656710-29656454 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 337-580
Cow position: chr1:56726674-56726432 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 130

Conread position: 337-581
Cow position: chr1:11771264-11771523 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 340-577
Cow position: chr1:61662024-61662266 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 129

Conread position: 340-580
Cow position: chr1:18087943-18087697 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 196

Conread position: 340-580
Cow position: chr1:70037732-70037973 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 123

Conread position: 340-580
Cow position: chr1:73010498-73010252 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 196

Conread position: 340-580
Cow position: chr1:73440480-73440234 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 196

Conread position: 340-580
Cow position: chr1:85630850-85630604 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 196

Conread position: 340-580
Cow position: chr1:99118998-99118752 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 196

Conread position: 350-580
Cow position: chr1:21165273-21165037 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 186

Conread position: 350-581
Cow position: chr1:21090969-21090732 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 19, 186

Conread position: 356-527
Cow position: chr1:31964578-31964754 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 88

Conread position: 358-581
Cow position: chr1:22909361-22909136 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 13, 21

Conread position: 359-581
Cow position: chr1:81837870-81838099 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 195

Conread position: 360-579
Cow position: chr1:73404275-73404049 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 369-580
Cow position: chr1:49132689-49132905 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 381-579
Cow position: chr1:40964675-40964877 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 70, 13

Conread position: 384-577
Cow position: chr1:31190958-31191153 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 28

Conread position: 392-578
Cow position: chr1:16372734-16372543 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 143

Conread position: 394-581
Cow position: chr1:12871996-12872188 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 395-580
Cow position: chr1:64594852-64595042 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 405-561
Cow position: chr1:30440602-30440442 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 37, 96

Conread position: 409-580
Cow position: chr1:31707926-31707750 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 126

Conread position: 413-580
Cow position: chr1:10468882-10469054 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 72

Conread position: 422-580
Cow position: chr1:81860084-81860242 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 26

Conread position: 429-577
Cow position: chr1:81357238-81357385 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 444-581
Cow position: chr1:28413821-28413957 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 447-581
Cow position: chr1:34684883-34684753 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 452-580
Cow position: chr1:29365802-29365674 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 97, 78

Conread position: 452-580
Cow position: chr1:98534992-98534864 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.