Cow genome map
| Conread name: | rcbl0_015095.y1 |
| Conread position: | 3-376 |
| Cow position: | chr19:12613943-12614320 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 204, 46 |
| Conread position: | 3-431 |
| Cow position: | chr19:2821156-2820731 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 115 |
| Conread position: | 3-438 |
| Cow position: | chr19:32457227-32456781 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 145 |
| Conread position: | 3-441 |
| Cow position: | chr19:29071139-29071574 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-491 |
| Cow position: | chr19:14581189-14580690 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 35 |
| Conread position: | 3-501 |
| Cow position: | chr19:15766692-15766168 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 157 |
| Conread position: | 3-508 |
| Cow position: | chr19:42274310-42274828 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 154 |
| Conread position: | 3-579 |
| Cow position: | chr19:7491997-7491417 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 145 |
| Conread position: | 3-579 |
| Cow position: | chr19:48534636-48534052 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 310 |
| Conread position: | 3-580 |
| Cow position: | chr19:930735-930140 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 3-580 |
| Cow position: | chr19:5733407-5732816 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 144 |
| Conread position: | 3-580 |
| Cow position: | chr19:36352185-36351590 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 145 |
| Conread position: | 3-581 |
| Cow position: | chr19:2260538-2261125 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 84 |
| Conread position: | 3-581 |
| Cow position: | chr19:2589100-2588509 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 153 |
| Conread position: | 3-581 |
| Cow position: | chr19:6556528-6555941 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 152 |
| Conread position: | 3-581 |
| Cow position: | chr19:12652791-12652195 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-581 |
| Cow position: | chr19:15719998-15720553 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 152 |
| Conread position: | 3-581 |
| Cow position: | chr19:25086110-25085528 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 153 |
| Conread position: | 3-581 |
| Cow position: | chr19:27612596-27613183 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 199 |
| Conread position: | 5-581 |
| Cow position: | chr19:7472964-7472380 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 9-477 |
| Cow position: | chr19:1169013-1169496 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 137 |
| Conread position: | 9-507 |
| Cow position: | chr19:19500783-19501297 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 137 |
| Conread position: | 9-507 |
| Cow position: | chr19:20433333-20433844 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-553 |
| Cow position: | chr19:14180091-14180652 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-557 |
| Cow position: | chr19:30237615-30237054 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 139 |
| Conread position: | 9-580 |
| Cow position: | chr19:42246-41654 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 329 |
| Conread position: | 9-580 |
| Cow position: | chr19:208406-207821 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 139 |
| Conread position: | 9-580 |
| Cow position: | chr19:777426-776834 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-580 |
| Cow position: | chr19:23488664-23488080 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 39 |
| Conread position: | 9-580 |
| Cow position: | chr19:29367438-29366849 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 138 |
| Conread position: | 9-580 |
| Cow position: | chr19:29624945-29624357 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-580 |
| Cow position: | chr19:55163747-55164336 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 141 |
| Conread position: | 9-581 |
| Cow position: | chr19:35982663-35982091 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 148 |
| Conread position: | 10-507 |
| Cow position: | chr19:12375472-12375976 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 10-581 |
| Cow position: | chr19:34985984-34985409 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 12-566 |
| Cow position: | chr19:26518429-26518996 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 135 |
| Conread position: | 12-580 |
| Cow position: | chr19:255218-255804 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 139 |
| Conread position: | 16-365 |
| Cow position: | chr19:44754005-44754357 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 27-580 |
| Cow position: | chr19:33877308-33876737 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 120 |
| Conread position: | 29-481 |
| Cow position: | chr19:3032449-3032918 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 38-580 |
| Cow position: | chr19:176356-175789 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 108 |
| Conread position: | 50-580 |
| Cow position: | chr19:3086657-3086114 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 96 |
| Conread position: | 58-578 |
| Cow position: | chr19:33945426-33944889 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 91 |
| Conread position: | 58-581 |
| Cow position: | chr19:44839339-44839849 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 34 |
| Conread position: | 59-417 |
| Cow position: | chr19:31762279-31762659 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 72-480 |
| Cow position: | chr19:1267381-1267807 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 74 |
| Conread position: | 118-581 |
| Cow position: | chr19:35843644-35843171 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 27 |
| Conread position: | 152-427 |
| Cow position: | chr19:9542934-9543227 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 53, 197 |
| Conread position: | 153-581 |
| Cow position: | chr19:17883703-17883285 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 154-581 |
| Cow position: | chr19:19173427-19172973 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 126 |
| Conread position: | 188-517 |
| Cow position: | chr19:3084964-3085285 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 204-472 |
| Cow position: | chr19:4360211-4359928 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 140 |
| Conread position: | 211-379 |
| Cow position: | chr19:33616757-33616586 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 211-512 |
| Cow position: | chr19:44216155-44216460 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 91, 127 |
| Conread position: | 211-518 |
| Cow position: | chr19:39077128-39076829 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 96, 75 |
| Conread position: | 211-577 |
| Cow position: | chr19:32140692-32140321 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 44 |
| Conread position: | 211-577 |
| Cow position: | chr19:32952514-32952145 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 89 |
| Conread position: | 211-580 |
| Cow position: | chr19:5902723-5902348 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 114 |
| Conread position: | 211-580 |
| Cow position: | chr19:7078951-7078577 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 112 |
| Conread position: | 211-580 |
| Cow position: | chr19:20612029-20611655 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 112 |
| Conread position: | 211-580 |
| Cow position: | chr19:35781572-35781197 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 127 |
| Conread position: | 211-581 |
| Cow position: | chr19:20671908-20672275 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 211-581 |
| Cow position: | chr19:39697169-39696804 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 60 |
| Conread position: | 211-581 |
| Cow position: | chr19:46821542-46821174 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 215-580 |
| Cow position: | chr19:743031-743386 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 38 |
| Conread position: | 217-581 |
| Cow position: | chr19:2269615-2269981 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 54 |
| Conread position: | 218-572 |
| Cow position: | chr19:31782258-31781898 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 111 |
| Conread position: | 221-580 |
| Cow position: | chr19:6784-6425 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 237-580 |
| Cow position: | chr19:33528516-33528168 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 86 |
| Conread position: | 241-574 |
| Cow position: | chr19:14528495-14528159 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 202 |
| Conread position: | 244-581 |
| Cow position: | chr19:2019103-2019443 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 173 |
| Conread position: | 245-512 |
| Cow position: | chr19:39726457-39726191 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 125, 57 |
| Conread position: | 246-580 |
| Cow position: | chr19:39394861-39394522 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 257-580 |
| Cow position: | chr19:405797-405469 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 262-580 |
| Cow position: | chr19:3221747-3221433 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 265-440 |
| Cow position: | chr19:42297856-42298032 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 73 |
| Conread position: | 306-467 |
| Cow position: | chr19:42725612-42725451 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 142 |
| Conread position: | 329-581 |
| Cow position: | chr19:42867042-42866785 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 41, 8 |
| Conread position: | 330-491 |
| Cow position: | chr19:38811932-38811767 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 7, 120 |
| Conread position: | 330-580 |
| Cow position: | chr19:1293927-1293671 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 205 |
| Conread position: | 330-581 |
| Cow position: | chr19:45464710-45464454 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 337-581 |
| Cow position: | chr19:1663637-1663392 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 340-522 |
| Cow position: | chr19:21337339-21337526 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 377-580 |
| Cow position: | chr19:48478091-48477890 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 68, 133 |
| Conread position: | 381-581 |
| Cow position: | chr19:50020438-50020642 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 75, 124 |
| Conread position: | 396-580 |
| Cow position: | chr19:55378403-55378216 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 139 |
Show alignments to all cow chromosomes.