Cow genome map

Conread name: rcbl0_015095.y1

Conread position: 2-580
Cow position:
Alignm length: 595
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 78

Conread position: 2-580
Cow position:
Alignm length: 602
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 3-403
Cow position:
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 89

Conread position: 3-404
Cow position:
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 222

Conread position: 3-426
Cow position:
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-436
Cow position:
Alignm length: 447
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 27

Conread position: 3-503
Cow position:
Alignm length: 523
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-503
Cow position:
Alignm length: 514
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 26

Conread position: 3-508
Cow position:
Alignm length: 527
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 45

Conread position: 3-522
Cow position:
Alignm length: 542
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 145

Conread position: 3-578
Cow position:
Alignm length: 605
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 34

Conread position: 3-580
Cow position:
Alignm length: 600
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 10

Conread position: 3-580
Cow position:
Alignm length: 606
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 148

Conread position: 3-580
Cow position:
Alignm length: 599
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 3-580
Cow position:
Alignm length: 604
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 603
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 61

Conread position: 3-580
Cow position:
Alignm length: 599
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 143

Conread position: 3-580
Cow position:
Alignm length: 604
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 147

Conread position: 3-580
Cow position:
Alignm length: 620
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-581
Cow position:
Alignm length: 609
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 81

Conread position: 3-581
Cow position:
Alignm length: 610
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 64

Conread position: 3-581
Cow position:
Alignm length: 603
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 125

Conread position: 3-581
Cow position:
Alignm length: 609
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 144

Conread position: 3-581
Cow position:
Alignm length: 612
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 85

Conread position: 3-581
Cow position:
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 3-581
Cow position:
Alignm length: 601
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 24

Conread position: 4-580
Cow position:
Alignm length: 596
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 26

Conread position: 4-581
Cow position:
Alignm length: 601
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 83

Conread position: 9-438
Cow position:
Alignm length: 446
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 25

Conread position: 9-444
Cow position:
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 34

Conread position: 9-466
Cow position:
Alignm length: 495
Alignm identity: 326
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 41, 163

Conread position: 9-507
Cow position:
Alignm length: 515
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 26

Conread position: 9-517
Cow position:
Alignm length: 529
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 154

Conread position: 9-564
Cow position:
Alignm length: 580
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 598
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 596
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 138

Conread position: 9-580
Cow position:
Alignm length: 596
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 139

Conread position: 9-580
Cow position:
Alignm length: 593
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 595
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 102

Conread position: 9-580
Cow position:
Alignm length: 598
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 9-580
Cow position:
Alignm length: 585
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 79

Conread position: 9-580
Cow position:
Alignm length: 595
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-581
Cow position:
Alignm length: 597
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-581
Cow position:
Alignm length: 599
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 87

Conread position: 9-581
Cow position:
Alignm length: 603
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 154

Conread position: 9-581
Cow position:
Alignm length: 598
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 9-581
Cow position:
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 30

Conread position: 9-581
Cow position:
Alignm length: 598
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 156

Conread position: 11-580
Cow position:
Alignm length: 595
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 129

Conread position: 12-558
Cow position:
Alignm length: 570
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-580
Cow position:
Alignm length: 617
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 12-580
Cow position:
Alignm length: 589
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 13-512
Cow position:
Alignm length: 520
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 121

Conread position: 13-565
Cow position:
Alignm length: 577
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 16

Conread position: 13-565
Cow position:
Alignm length: 577
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 13-576
Cow position:
Alignm length: 589
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 41

Conread position: 13-580
Cow position:
Alignm length: 595
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-580
Cow position:
Alignm length: 594
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 97

Conread position: 18-432
Cow position:
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 129

Conread position: 21-581
Cow position:
Alignm length: 586
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 134

Conread position: 26-580
Cow position:
Alignm length: 580
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 121

Conread position: 27-578
Cow position:
Alignm length: 564
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 30-488
Cow position:
Alignm length: 479
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 126

Conread position: 35-581
Cow position:
Alignm length: 570
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 124

Conread position: 45-511
Cow position:
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 46

Conread position: 45-581
Cow position:
Alignm length: 557
Alignm identity: 355
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 119, 60

Conread position: 50-580
Cow position:
Alignm length: 554
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 96

Conread position: 67-581
Cow position:
Alignm length: 538
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 20

Conread position: 68-581
Cow position:
Alignm length: 531
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 31

Conread position: 69-581
Cow position:
Alignm length: 533
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 17

Conread position: 80-566
Cow position:
Alignm length: 501
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 58

Conread position: 90-578
Cow position:
Alignm length: 519
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 57

Conread position: 102-577
Cow position:
Alignm length: 497
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 44

Conread position: 108-578
Cow position:
Alignm length: 495
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 190

Conread position: 116-580
Cow position:
Alignm length: 488
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 30

Conread position: 117-532
Cow position:
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 32

Conread position: 117-581
Cow position:
Alignm length: 486
Alignm identity: 328
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 79, 32

Conread position: 207-581
Cow position:
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 211-431
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 158, 99

Conread position: 211-436
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 97, 21

Conread position: 211-456
Cow position:
Alignm length: 248
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 96, 128

Conread position: 211-560
Cow position:
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 23

Conread position: 211-577
Cow position:
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 54

Conread position: 211-580
Cow position:
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 91

Conread position: 211-580
Cow position:
Alignm length: 380
Alignm identity: 266
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 159, 60

Conread position: 211-580
Cow position:
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 58

Conread position: 211-581
Cow position:
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 79

Conread position: 211-581
Cow position:
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 58

Conread position: 211-581
Cow position:
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 100

Conread position: 216-364
Cow position:
Alignm length: 152
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 216-577
Cow position:
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 115

Conread position: 217-453
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 82, 114

Conread position: 217-577
Cow position:
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 108

Conread position: 218-580
Cow position:
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 122

Conread position: 218-580
Cow position:
Alignm length: 380
Alignm identity: 262
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 89, 105

Conread position: 221-529
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 81

Conread position: 224-580
Cow position:
Alignm length: 366
Alignm identity: 254
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 19, 59

Conread position: 231-448
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 40

Conread position: 234-580
Cow position:
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 11

Conread position: 235-407
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 131, 85

Conread position: 241-512
Cow position:
Alignm length: 278
Alignm identity: 187
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 58, 13

Conread position: 243-474
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 64, 97

Conread position: 252-580
Cow position:
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 28

Conread position: 274-541
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 28

Conread position: 295-577
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 27

Conread position: 308-581
Cow position:
Alignm length: 276
Alignm identity: 200
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 61, 5

Conread position: 310-580
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 136, 52

Conread position: 314-579
Cow position:
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 25

Conread position: 332-581
Cow position:
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 5

Conread position: 336-567
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 33, 92

Conread position: 336-567
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 101, 47

Conread position: 337-580
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 43

Conread position: 340-580
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 151

Conread position: 348-579
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 183

Conread position: 355-580
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 15, 140

Conread position: 356-578
Cow position:
Alignm length: 230
Alignm identity: 179
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 213

Conread position: 357-580
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 22

Conread position: 443-581
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 452-580
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 78

Show alignments to all cow chromosomes.