Cow genome map

Conread name: rcbl0_015095.y1

Conread position: 3-411
Cow position:
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 3-449
Cow position:
Alignm length: 462
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 18

Conread position: 3-455
Cow position:
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 152

Conread position: 3-506
Cow position:
Alignm length: 527
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 33

Conread position: 3-536
Cow position:
Alignm length: 555
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-577
Cow position:
Alignm length: 606
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 103

Conread position: 3-577
Cow position:
Alignm length: 597
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 77

Conread position: 3-580
Cow position:
Alignm length: 593
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 45

Conread position: 3-580
Cow position:
Alignm length: 603
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 604
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 604
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 121

Conread position: 3-580
Cow position:
Alignm length: 600
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 3-580
Cow position:
Alignm length: 607
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 3-580
Cow position:
Alignm length: 609
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 35

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 600
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 144

Conread position: 3-581
Cow position:
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 144

Conread position: 3-581
Cow position:
Alignm length: 600
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 148

Conread position: 4-568
Cow position:
Alignm length: 589
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 113

Conread position: 4-580
Cow position:
Alignm length: 600
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 143

Conread position: 4-581
Cow position:
Alignm length: 597
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 64

Conread position: 5-580
Cow position:
Alignm length: 603
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 76

Conread position: 9-368
Cow position:
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-502
Cow position:
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 205

Conread position: 9-522
Cow position:
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-531
Cow position:
Alignm length: 546
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 111

Conread position: 9-580
Cow position:
Alignm length: 597
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 587
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 36

Conread position: 9-580
Cow position:
Alignm length: 596
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 138

Conread position: 9-580
Cow position:
Alignm length: 583
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 96

Conread position: 9-580
Cow position:
Alignm length: 596
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 96

Conread position: 9-580
Cow position:
Alignm length: 598
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 597
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 587
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 596
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 592
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 595
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 599
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 583
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 79

Conread position: 11-502
Cow position:
Alignm length: 521
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 46

Conread position: 12-482
Cow position:
Alignm length: 493
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 26

Conread position: 12-580
Cow position:
Alignm length: 583
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 106

Conread position: 12-580
Cow position:
Alignm length: 594
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 145

Conread position: 12-581
Cow position:
Alignm length: 580
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 135

Conread position: 13-580
Cow position:
Alignm length: 593
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 27-580
Cow position:
Alignm length: 581
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 29-580
Cow position:
Alignm length: 571
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 19

Conread position: 35-579
Cow position:
Alignm length: 569
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 89

Conread position: 60-441
Cow position:
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 85

Conread position: 68-580
Cow position:
Alignm length: 536
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 78

Conread position: 69-580
Cow position:
Alignm length: 535
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 86

Conread position: 69-580
Cow position:
Alignm length: 530
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 86

Conread position: 69-580
Cow position:
Alignm length: 524
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 103

Conread position: 93-581
Cow position:
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 47

Conread position: 120-376
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 11, 27

Conread position: 154-581
Cow position:
Alignm length: 458
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 186

Conread position: 172-493
Cow position:
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 36

Conread position: 207-526
Cow position:
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 134

Conread position: 216-456
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 39

Conread position: 216-580
Cow position:
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 85

Conread position: 217-568
Cow position:
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 46

Conread position: 217-580
Cow position:
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 55

Conread position: 218-441
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 100

Conread position: 219-431
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 9, 105

Conread position: 237-581
Cow position:
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 267

Conread position: 239-562
Cow position:
Alignm length: 330
Alignm identity: 219
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 116, 60

Conread position: 255-579
Cow position:
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 196

Conread position: 260-579
Cow position:
Alignm length: 329
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 6

Conread position: 263-580
Cow position:
Alignm length: 325
Alignm identity: 226
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 58, 9

Conread position: 265-581
Cow position:
Alignm length: 323
Alignm identity: 224
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 98

Conread position: 274-488
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 98, 65

Conread position: 312-581
Cow position:
Alignm length: 278
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 136, 122

Conread position: 313-581
Cow position:
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 12

Conread position: 337-580
Cow position:
Alignm length: 252
Alignm identity: 187
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 32, 199

Conread position: 342-577
Cow position:
Alignm length: 242
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 220

Conread position: 345-577
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 126

Conread position: 349-581
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 187

Conread position: 349-581
Cow position:
Alignm length: 239
Alignm identity: 184
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 20, 188

Show alignments to all cow chromosomes.