Cow genome map
| Conread name: | rcbl0_015095.y1 |
| Conread position: | 3-411 |
| Cow position: | chr23:7374479-7374062 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 145 |
| Conread position: | 3-449 |
| Cow position: | chr23:29271695-29271246 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 18 |
| Conread position: | 3-455 |
| Cow position: | chr23:10014143-10013678 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 152 |
| Conread position: | 3-506 |
| Cow position: | chr23:29471505-29472021 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 3-536 |
| Cow position: | chr23:11404877-11405425 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 153 |
| Conread position: | 3-577 |
| Cow position: | chr23:3167840-3167259 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 103 |
| Conread position: | 3-577 |
| Cow position: | chr23:11079083-11078498 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 77 |
| Conread position: | 3-580 |
| Cow position: | chr23:2180055-2180632 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 45 |
| Conread position: | 3-580 |
| Cow position: | chr23:4892506-4891910 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-580 |
| Cow position: | chr23:5623771-5624358 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-580 |
| Cow position: | chr23:11080194-11079598 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-580 |
| Cow position: | chr23:11344301-11343711 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 3-580 |
| Cow position: | chr23:15215045-15215620 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 65 |
| Conread position: | 3-580 |
| Cow position: | chr23:19493662-19493063 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 144 |
| Conread position: | 3-580 |
| Cow position: | chr23:20025750-20025148 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 3-580 |
| Cow position: | chr23:24098935-24098342 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-580 |
| Cow position: | chr23:26829052-26828467 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 153 |
| Conread position: | 3-580 |
| Cow position: | chr23:30622691-30623286 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 3-580 |
| Cow position: | chr23:36309014-36308427 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 144 |
| Conread position: | 3-581 |
| Cow position: | chr23:6593119-6593711 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 144 |
| Conread position: | 3-581 |
| Cow position: | chr23:7360263-7359671 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 148 |
| Conread position: | 4-568 |
| Cow position: | chr23:17000242-16999666 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 113 |
| Conread position: | 4-580 |
| Cow position: | chr23:15180764-15180173 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 143 |
| Conread position: | 4-581 |
| Cow position: | chr23:17404406-17403827 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 64 |
| Conread position: | 5-580 |
| Cow position: | chr23:30633785-30634380 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 9-368 |
| Cow position: | chr23:10554420-10554794 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-502 |
| Cow position: | chr23:26230917-26230422 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 205 |
| Conread position: | 9-522 |
| Cow position: | chr23:15020717-15020189 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 139 |
| Conread position: | 9-531 |
| Cow position: | chr23:38560412-38560947 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 111 |
| Conread position: | 9-580 |
| Cow position: | chr23:671973-671386 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-580 |
| Cow position: | chr23:1398443-1399000 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 36 |
| Conread position: | 9-580 |
| Cow position: | chr23:1959930-1959341 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 138 |
| Conread position: | 9-580 |
| Cow position: | chr23:2369584-2369030 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 9-580 |
| Cow position: | chr23:3286548-3285973 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 96 |
| Conread position: | 9-580 |
| Cow position: | chr23:3302658-3302069 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-580 |
| Cow position: | chr23:5441720-5441132 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-580 |
| Cow position: | chr23:11070867-11070291 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-580 |
| Cow position: | chr23:11782589-11782000 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-580 |
| Cow position: | chr23:14215431-14216012 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-580 |
| Cow position: | chr23:21351152-21351735 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-580 |
| Cow position: | chr23:21772105-21772695 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 9-580 |
| Cow position: | chr23:40825585-40825015 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 79 |
| Conread position: | 11-502 |
| Cow position: | chr23:23470516-23470009 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 46 |
| Conread position: | 12-482 |
| Cow position: | chr23:14738705-14738219 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 26 |
| Conread position: | 12-580 |
| Cow position: | chr23:1337702-1338276 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 106 |
| Conread position: | 12-580 |
| Cow position: | chr23:8708192-8707605 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 145 |
| Conread position: | 12-581 |
| Cow position: | chr23:30210917-30211449 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 135 |
| Conread position: | 13-580 |
| Cow position: | chr23:41015728-41015143 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 134 |
| Conread position: | 27-580 |
| Cow position: | chr23:4531917-4532483 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 120 |
| Conread position: | 29-580 |
| Cow position: | chr23:11128792-11128234 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 19 |
| Conread position: | 35-579 |
| Cow position: | chr23:8291226-8290677 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 89 |
| Conread position: | 60-441 |
| Cow position: | chr23:26840922-26840527 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 68-580 |
| Cow position: | chr23:15529328-15528801 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 78 |
| Conread position: | 69-580 |
| Cow position: | chr23:4437362-4436833 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 86 |
| Conread position: | 69-580 |
| Cow position: | chr23:5870666-5871182 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 86 |
| Conread position: | 69-580 |
| Cow position: | chr23:25358075-25357560 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 103 |
| Conread position: | 93-581 |
| Cow position: | chr23:19637204-19637681 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 47 |
| Conread position: | 120-376 |
| Cow position: | chr23:36748252-36748505 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 154-581 |
| Cow position: | chr23:25670116-25670567 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 186 |
| Conread position: | 172-493 |
| Cow position: | chr23:39108186-39108518 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 207-526 |
| Cow position: | chr23:344876-345200 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 134 |
| Conread position: | 216-456 |
| Cow position: | chr23:25594541-25594303 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 82, 39 |
| Conread position: | 216-580 |
| Cow position: | chr23:3709982-3709618 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 85 |
| Conread position: | 217-568 |
| Cow position: | chr23:20541552-20541202 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 46 |
| Conread position: | 217-580 |
| Cow position: | chr23:14959378-14959737 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 55 |
| Conread position: | 218-441 |
| Cow position: | chr23:1048268-1048501 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 219-431 |
| Cow position: | chr23:5539555-5539767 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 9, 105 |
| Conread position: | 237-581 |
| Cow position: | chr23:25554156-25553805 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 267 |
| Conread position: | 239-562 |
| Cow position: | chr23:36675596-36675915 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 255-579 |
| Cow position: | chr23:21277093-21277419 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 196 |
| Conread position: | 260-579 |
| Cow position: | chr23:27313383-27313060 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 6 |
| Conread position: | 263-580 |
| Cow position: | chr23:28987878-28987557 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 265-581 |
| Cow position: | chr23:1010019-1010332 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 274-488 |
| Cow position: | chr23:25411976-25412194 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 98, 65 |
| Conread position: | 312-581 |
| Cow position: | chr23:28233378-28233103 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 136, 122 |
| Conread position: | 313-581 |
| Cow position: | chr23:20170720-20170988 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 337-580 |
| Cow position: | chr23:771028-771277 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 32, 199 |
| Conread position: | 342-577 |
| Cow position: | chr23:1325857-1326097 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 220 |
| Conread position: | 345-577 |
| Cow position: | chr23:20389566-20389804 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 126 |
| Conread position: | 349-581 |
| Cow position: | chr23:24487249-24487485 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 98, 187 |
| Conread position: | 349-581 |
| Cow position: | chr23:29459802-29460036 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 20, 188 |
Show alignments to all cow chromosomes.