Cow genome map

Conread name: rcbl0_015095.y1

Conread position: 1-580
Cow position:
Alignm length: 604
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 155

Conread position: 3-440
Cow position:
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 52

Conread position: 3-481
Cow position:
Alignm length: 503
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 117

Conread position: 3-488
Cow position:
Alignm length: 512
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-504
Cow position:
Alignm length: 521
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 80

Conread position: 3-504
Cow position:
Alignm length: 519
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 25

Conread position: 3-511
Cow position:
Alignm length: 530
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 144

Conread position: 3-528
Cow position:
Alignm length: 545
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 154

Conread position: 3-565
Cow position:
Alignm length: 575
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 150

Conread position: 3-568
Cow position:
Alignm length: 603
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-572
Cow position:
Alignm length: 592
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 19

Conread position: 3-577
Cow position:
Alignm length: 599
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-577
Cow position:
Alignm length: 599
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 154

Conread position: 3-579
Cow position:
Alignm length: 587
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 77

Conread position: 3-580
Cow position:
Alignm length: 603
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 18

Conread position: 3-580
Cow position:
Alignm length: 604
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 144

Conread position: 3-580
Cow position:
Alignm length: 608
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 152

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 609
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-580
Cow position:
Alignm length: 609
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 601
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 600
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 3-581
Cow position:
Alignm length: 600
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 134

Conread position: 3-581
Cow position:
Alignm length: 595
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 71

Conread position: 3-581
Cow position:
Alignm length: 589
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 10

Conread position: 3-581
Cow position:
Alignm length: 592
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 94

Conread position: 3-581
Cow position:
Alignm length: 618
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 66

Conread position: 4-368
Cow position:
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 153

Conread position: 9-385
Cow position:
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 138

Conread position: 9-522
Cow position:
Alignm length: 538
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 139

Conread position: 9-570
Cow position:
Alignm length: 590
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 109

Conread position: 9-579
Cow position:
Alignm length: 592
Alignm identity: 374
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 187, 29

Conread position: 9-580
Cow position:
Alignm length: 597
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 137

Conread position: 9-580
Cow position:
Alignm length: 594
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 587
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 598
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 589
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 597
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 349

Conread position: 9-580
Cow position:
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 596
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 126

Conread position: 9-580
Cow position:
Alignm length: 598
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 139

Conread position: 9-580
Cow position:
Alignm length: 595
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 599
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 139

Conread position: 9-580
Cow position:
Alignm length: 597
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 591
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-581
Cow position:
Alignm length: 593
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 147

Conread position: 9-581
Cow position:
Alignm length: 597
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 85

Conread position: 9-581
Cow position:
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 10-580
Cow position:
Alignm length: 580
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 203

Conread position: 13-431
Cow position:
Alignm length: 437
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 134

Conread position: 13-449
Cow position:
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 133

Conread position: 13-580
Cow position:
Alignm length: 594
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 13-580
Cow position:
Alignm length: 590
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 328

Conread position: 13-580
Cow position:
Alignm length: 590
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 102

Conread position: 14-577
Cow position:
Alignm length: 586
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 31

Conread position: 14-579
Cow position:
Alignm length: 588
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 65

Conread position: 15-379
Cow position:
Alignm length: 382
Alignm identity: 266
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 73

Conread position: 15-525
Cow position:
Alignm length: 526
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 33

Conread position: 19-581
Cow position:
Alignm length: 586
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 114

Conread position: 27-456
Cow position:
Alignm length: 448
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 121

Conread position: 27-580
Cow position:
Alignm length: 577
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 120

Conread position: 30-581
Cow position:
Alignm length: 576
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 50-580
Cow position:
Alignm length: 555
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 96

Conread position: 53-580
Cow position:
Alignm length: 567
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 66

Conread position: 55-580
Cow position:
Alignm length: 551
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 91

Conread position: 67-581
Cow position:
Alignm length: 541
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 190

Conread position: 68-528
Cow position:
Alignm length: 477
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 45

Conread position: 68-540
Cow position:
Alignm length: 499
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 77

Conread position: 68-581
Cow position:
Alignm length: 534
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 87

Conread position: 69-376
Cow position:
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 77

Conread position: 70-456
Cow position:
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 77

Conread position: 80-580
Cow position:
Alignm length: 516
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 76

Conread position: 80-581
Cow position:
Alignm length: 526
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 66

Conread position: 101-444
Cow position:
Alignm length: 363
Alignm identity: 251
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 58

Conread position: 120-581
Cow position:
Alignm length: 484
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 29

Conread position: 135-581
Cow position:
Alignm length: 467
Alignm identity: 325
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 159

Conread position: 149-376
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 198

Conread position: 207-507
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 7, 101

Conread position: 211-376
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 129

Conread position: 211-580
Cow position:
Alignm length: 377
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 127

Conread position: 211-580
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 211-580
Cow position:
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-580
Cow position:
Alignm length: 376
Alignm identity: 264
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 96, 117

Conread position: 211-581
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 103

Conread position: 216-580
Cow position:
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 114

Conread position: 217-580
Cow position:
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 85

Conread position: 217-580
Cow position:
Alignm length: 372
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 67

Conread position: 217-580
Cow position:
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 129

Conread position: 217-580
Cow position:
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 84

Conread position: 224-560
Cow position:
Alignm length: 340
Alignm identity: 228
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 75, 100

Conread position: 232-581
Cow position:
Alignm length: 357
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 70

Conread position: 232-581
Cow position:
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 17

Conread position: 237-449
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 42

Conread position: 237-580
Cow position:
Alignm length: 351
Alignm identity: 247
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 70, 86

Conread position: 241-506
Cow position:
Alignm length: 270
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 217, 81

Conread position: 264-504
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 178, 38

Conread position: 272-577
Cow position:
Alignm length: 314
Alignm identity: 216
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 43, 58

Conread position: 272-580
Cow position:
Alignm length: 316
Alignm identity: 220
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 36, 68

Conread position: 288-580
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 19, 43

Conread position: 297-581
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 16, 34

Conread position: 306-581
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 26, 110

Conread position: 324-580
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 126

Conread position: 330-580
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 171

Conread position: 337-581
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 238

Conread position: 340-580
Cow position:
Alignm length: 249
Alignm identity: 177
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 29, 196

Conread position: 351-580
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 185

Conread position: 427-580
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 447-580
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 83

Show alignments to all cow chromosomes.