Cow genome map

Conread name: rcbl0_015095.y1

Conread position: 2-578
Cow position:
Alignm length: 594
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 72

Conread position: 2-581
Cow position:
Alignm length: 599
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 154

Conread position: 3-417
Cow position:
Alignm length: 451
Alignm identity: 307
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 46, 163

Conread position: 3-443
Cow position:
Alignm length: 459
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 3-491
Cow position:
Alignm length: 511
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 89

Conread position: 3-502
Cow position:
Alignm length: 508
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 182

Conread position: 3-527
Cow position:
Alignm length: 551
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 153

Conread position: 3-542
Cow position:
Alignm length: 563
Alignm identity: 357
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 140, 208

Conread position: 3-552
Cow position:
Alignm length: 570
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-568
Cow position:
Alignm length: 591
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 145

Conread position: 3-579
Cow position:
Alignm length: 602
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-579
Cow position:
Alignm length: 601
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 135

Conread position: 3-580
Cow position:
Alignm length: 601
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 153

Conread position: 3-580
Cow position:
Alignm length: 600
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 3-580
Cow position:
Alignm length: 603
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 144

Conread position: 3-580
Cow position:
Alignm length: 601
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 100

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 142

Conread position: 3-580
Cow position:
Alignm length: 603
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 76

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 32

Conread position: 3-580
Cow position:
Alignm length: 610
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 145

Conread position: 3-580
Cow position:
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 3-580
Cow position:
Alignm length: 610
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 53

Conread position: 3-580
Cow position:
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 89

Conread position: 3-580
Cow position:
Alignm length: 583
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 3-580
Cow position:
Alignm length: 621
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 3-580
Cow position:
Alignm length: 599
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 35

Conread position: 3-581
Cow position:
Alignm length: 598
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 34

Conread position: 3-581
Cow position:
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 62

Conread position: 3-581
Cow position:
Alignm length: 597
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 3-581
Cow position:
Alignm length: 598
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 149

Conread position: 3-581
Cow position:
Alignm length: 588
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 163

Conread position: 3-581
Cow position:
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 40

Conread position: 3-581
Cow position:
Alignm length: 604
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 144

Conread position: 5-521
Cow position:
Alignm length: 540
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 158

Conread position: 5-581
Cow position:
Alignm length: 607
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 34

Conread position: 5-581
Cow position:
Alignm length: 594
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 142

Conread position: 6-581
Cow position:
Alignm length: 599
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 37

Conread position: 9-479
Cow position:
Alignm length: 484
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 342

Conread position: 9-561
Cow position:
Alignm length: 590
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 104

Conread position: 9-568
Cow position:
Alignm length: 584
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 100

Conread position: 9-570
Cow position:
Alignm length: 587
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 9-572
Cow position:
Alignm length: 588
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 142

Conread position: 9-577
Cow position:
Alignm length: 589
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 126

Conread position: 9-577
Cow position:
Alignm length: 596
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-578
Cow position:
Alignm length: 597
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 339

Conread position: 9-580
Cow position:
Alignm length: 594
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-580
Cow position:
Alignm length: 587
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 597
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 598
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 9-580
Cow position:
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 9-580
Cow position:
Alignm length: 596
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 10-531
Cow position:
Alignm length: 547
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 143

Conread position: 10-580
Cow position:
Alignm length: 588
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 115

Conread position: 10-580
Cow position:
Alignm length: 599
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 112

Conread position: 11-455
Cow position:
Alignm length: 471
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 24

Conread position: 11-581
Cow position:
Alignm length: 594
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 37

Conread position: 11-581
Cow position:
Alignm length: 597
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 55

Conread position: 12-580
Cow position:
Alignm length: 584
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-580
Cow position:
Alignm length: 588
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-580
Cow position:
Alignm length: 598
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-580
Cow position:
Alignm length: 589
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 135

Conread position: 12-580
Cow position:
Alignm length: 593
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 37

Conread position: 12-581
Cow position:
Alignm length: 591
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 12-581
Cow position:
Alignm length: 605
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 145

Conread position: 12-581
Cow position:
Alignm length: 594
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 216

Conread position: 13-580
Cow position:
Alignm length: 589
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 135

Conread position: 13-580
Cow position:
Alignm length: 582
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 135

Conread position: 13-581
Cow position:
Alignm length: 574
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 52

Conread position: 17-580
Cow position:
Alignm length: 586
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 20-580
Cow position:
Alignm length: 586
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 104

Conread position: 27-508
Cow position:
Alignm length: 508
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 124

Conread position: 27-580
Cow position:
Alignm length: 578
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 27-580
Cow position:
Alignm length: 580
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 33-581
Cow position:
Alignm length: 561
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 130

Conread position: 34-427
Cow position:
Alignm length: 396
Alignm identity: 265
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 16, 122

Conread position: 35-580
Cow position:
Alignm length: 565
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 111

Conread position: 35-580
Cow position:
Alignm length: 576
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 117

Conread position: 38-417
Cow position:
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 54

Conread position: 38-580
Cow position:
Alignm length: 563
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 108

Conread position: 38-580
Cow position:
Alignm length: 561
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 284

Conread position: 51-572
Cow position:
Alignm length: 541
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 254

Conread position: 51-580
Cow position:
Alignm length: 554
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 95

Conread position: 56-581
Cow position:
Alignm length: 537
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 109

Conread position: 63-577
Cow position:
Alignm length: 534
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 38

Conread position: 68-580
Cow position:
Alignm length: 536
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 84

Conread position: 75-580
Cow position:
Alignm length: 524
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 71

Conread position: 76-580
Cow position:
Alignm length: 529
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 70

Conread position: 80-581
Cow position:
Alignm length: 520
Alignm identity: 332
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 162

Conread position: 88-580
Cow position:
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 253

Conread position: 91-432
Cow position:
Alignm length: 358
Alignm identity: 243
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 109, 74

Conread position: 98-580
Cow position:
Alignm length: 505
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 15

Conread position: 99-581
Cow position:
Alignm length: 506
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 56

Conread position: 125-581
Cow position:
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 30

Conread position: 153-542
Cow position:
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 67

Conread position: 207-441
Cow position:
Alignm length: 239
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 107

Conread position: 211-375
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 127

Conread position: 211-437
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 91

Conread position: 211-442
Cow position:
Alignm length: 233
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 33

Conread position: 211-456
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 0

Conread position: 211-476
Cow position:
Alignm length: 269
Alignm identity: 189
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 96, 126

Conread position: 211-568
Cow position:
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 73

Conread position: 211-577
Cow position:
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 56

Conread position: 211-580
Cow position:
Alignm length: 378
Alignm identity: 259
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 93, 40

Conread position: 211-580
Cow position:
Alignm length: 379
Alignm identity: 261
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 96, 49

Conread position: 211-580
Cow position:
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 112

Conread position: 211-580
Cow position:
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 130

Conread position: 211-580
Cow position:
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 118

Conread position: 211-581
Cow position:
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 76

Conread position: 211-581
Cow position:
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 129

Conread position: 211-581
Cow position:
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 91

Conread position: 211-581
Cow position:
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 26

Conread position: 212-512
Cow position:
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 128

Conread position: 212-562
Cow position:
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 60

Conread position: 213-580
Cow position:
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 110

Conread position: 215-533
Cow position:
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 95

Conread position: 216-514
Cow position:
Alignm length: 306
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 28

Conread position: 216-580
Cow position:
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 16

Conread position: 232-580
Cow position:
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 235-557
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 196

Conread position: 236-522
Cow position:
Alignm length: 293
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 104

Conread position: 241-579
Cow position:
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 99

Conread position: 242-581
Cow position:
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 7

Conread position: 244-580
Cow position:
Alignm length: 344
Alignm identity: 239
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 64, 27

Conread position: 254-568
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 255-580
Cow position:
Alignm length: 332
Alignm identity: 233
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 114, 43

Conread position: 255-581
Cow position:
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 47

Conread position: 261-580
Cow position:
Alignm length: 329
Alignm identity: 231
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 46, 62

Conread position: 266-540
Cow position:
Alignm length: 282
Alignm identity: 208
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 41, 62

Conread position: 272-581
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 98, 44

Conread position: 284-580
Cow position:
Alignm length: 298
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 18

Conread position: 330-580
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 67

Conread position: 330-581
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 12, 144

Conread position: 334-504
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 337-580
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 33, 199

Conread position: 337-581
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 340-580
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 196

Conread position: 340-580
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 32, 155

Conread position: 345-580
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 100

Conread position: 354-581
Cow position:
Alignm length: 234
Alignm identity: 180
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 17, 120

Conread position: 369-575
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 82, 119

Conread position: 394-572
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 394-581
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 396-577
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 403-580
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 132

Conread position: 440-581
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 447-580
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 452-580
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 471-580
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 55

Show alignments to all cow chromosomes.