Cow genome map
| Conread name: | rcbl0_015248.y1 |
| Conread position: | 1-116 |
| Cow position: | chr1:83121204-83121322 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-118 |
| Cow position: | chr1:32350366-32350486 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-132 |
| Cow position: | chr1:86397178-86397311 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 1-133 |
| Cow position: | chr1:59196756-59196622 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 34, 120 |
| Conread position: | 1-136 |
| Cow position: | chr1:17487946-17488084 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-136 |
| Cow position: | chr1:38268847-38268985 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-138 |
| Cow position: | chr1:54440698-54440558 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-139 |
| Cow position: | chr1:42182792-42182656 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-139 |
| Cow position: | chr1:51445042-51445183 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-139 |
| Cow position: | chr1:81234389-81234249 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 1-139 |
| Cow position: | chr1:87946147-87946282 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 1-139 |
| Cow position: | chr1:89002124-89002262 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-139 |
| Cow position: | chr1:92612784-92612642 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 2-139 |
| Cow position: | chr1:12040866-12040728 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 33, 71 |
| Conread position: | 43-132 |
| Cow position: | chr1:79626550-79626639 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 78 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-435 |
| Cow position: | chr1:98081274-98081125 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 279-492 |
| Cow position: | chr1:656362-656139 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 279-510 |
| Cow position: | chr1:92260122-92259868 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 197 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 280-489 |
| Cow position: | chr1:89002268-89002472 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 284-436 |
| Cow position: | chr1:96658266-96658110 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 122 |
| Conread position: | 286-473 |
| Cow position: | chr1:7834175-7834360 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 290-510 |
| Cow position: | chr1:38269196-38269398 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 290-510 |
| Cow position: | chr1:67884637-67884841 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 290-560 |
| Cow position: | chr1:3970580-3970300 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 223, 29 |
| Conread position: | 320-585 |
| Cow position: | chr1:5216148-5215870 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 96, 126 |
| Conread position: | 320-591 |
| Cow position: | chr1:78131294-78131571 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 110, 126 |
| Conread position: | 321-510 |
| Cow position: | chr1:89489867-89490052 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 322-510 |
| Cow position: | chr1:51445249-51445438 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 326-540 |
| Cow position: | chr1:101893124-101893341 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 185, 23 |
| Conread position: | 327-591 |
| Cow position: | chr1:15218696-15218423 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 157, 71 |
| Conread position: | 337-510 |
| Cow position: | chr1:100819964-100820137 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 381-510 |
| Cow position: | chr1:81234168-81234041 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 107, 0 |
Show alignments to all cow chromosomes.