Cow genome map


           Conread name:
           rcbl0_015248.y1
        

               Conread position:
               1-132
               

               Cow position:
               chr13:16035158-16035290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               1-136
               

               Cow position:
               chr13:38487068-38487206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr13:10386930-10386785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr13:44677693-44677845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               3-139
               

               Cow position:
               chr13:56732881-56733020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 119
               

               Conread position:
               4-132
               

               Cow position:
               chr13:43790726-43790857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               4-139
               

               Cow position:
               chr13:2555042-2555180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               25-139
               

               Cow position:
               chr13:41117110-41117226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 101
               

               Conread position:
               279-508
               

               Cow position:
               chr13:18546378-18546153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               279-510
               

               Cow position:
               chr13:41117231-41117470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               284-540
               

               Cow position:
               chr13:38495963-38495697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               12, 141
               

               Conread position:
               286-510
               

               Cow position:
               chr13:6646546-6646317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               25, 140
               

               Conread position:
               320-510
               

               Cow position:
               chr13:8926080-8925890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-591
               

               Cow position:
               chr13:16568791-16568508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               111, 69
               

               Conread position:
               322-591
               

               Cow position:
               chr13:24259812-24259535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               190, 38
               

               Conread position:
               327-489
               

               Cow position:
               chr13:38487292-38487452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               347-476
               

               Cow position:
               chr13:6641663-6641535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               349-510
               

               Cow position:
               chr13:54685237-54685079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               8, 0
               
Show alignments to all cow chromosomes.