Cow genome map
| Conread name: | rcbl0_015248.y1 |
| Conread position: | 1-121 |
| Cow position: | chr16:9749945-9749824 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 98 |
| Conread position: | 1-132 |
| Cow position: | chr16:1405235-1405100 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 1-136 |
| Cow position: | chr16:35230929-35231064 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 1-137 |
| Cow position: | chr16:6531703-6531843 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-139 |
| Cow position: | chr16:33694140-33694006 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-139 |
| Cow position: | chr16:48940933-48940797 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 3-135 |
| Cow position: | chr16:40823266-40823136 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 5-160 |
| Cow position: | chr16:4863514-4863671 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 136 |
| Conread position: | 7-132 |
| Cow position: | chr16:33517785-33517657 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 24-135 |
| Cow position: | chr16:9826624-9826510 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 250-500 |
| Cow position: | chr16:9826530-9826290 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 260-498 |
| Cow position: | chr16:35231051-35231282 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 270-509 |
| Cow position: | chr16:45728587-45728341 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 224 |
| Conread position: | 279-496 |
| Cow position: | chr16:49166128-49165903 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 300-422 |
| Cow position: | chr16:16329656-16329777 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 320-510 |
| Cow position: | chr16:4864025-4864211 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 320-510 |
| Cow position: | chr16:47993174-47992983 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 320-510 |
| Cow position: | chr16:49210099-49209911 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 320-593 |
| Cow position: | chr16:27162253-27161976 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 185, 39 |
| Conread position: | 320-594 |
| Cow position: | chr16:11107918-11107648 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 76, 20 |
| Conread position: | 322-436 |
| Cow position: | chr16:23956895-23957007 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 324-493 |
| Cow position: | chr16:33689371-33689540 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-509 |
| Cow position: | chr16:40822851-40822667 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 353-511 |
| Cow position: | chr16:21599199-21599037 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 358-510 |
| Cow position: | chr16:56877891-56878042 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 368-507 |
| Cow position: | chr16:30686982-30686844 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 371-517 |
| Cow position: | chr16:13523945-13523801 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 124, 0 |
Show alignments to all cow chromosomes.