Cow genome map
| Conread name: | rcbl0_015248.y1 |
| Conread position: | 1-129 |
| Cow position: | chr3:60019094-60018963 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-130 |
| Cow position: | chr3:66133663-66133538 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-133 |
| Cow position: | chr3:39963562-39963697 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-136 |
| Cow position: | chr3:33598672-33598807 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-139 |
| Cow position: | chr3:12130295-12130157 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 99 |
| Conread position: | 1-139 |
| Cow position: | chr3:23086404-23086545 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-139 |
| Cow position: | chr3:47695777-47695918 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-139 |
| Cow position: | chr3:74540057-74540196 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 37, 44 |
| Conread position: | 1-139 |
| Cow position: | chr3:84393802-84393943 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-165 |
| Cow position: | chr3:71209675-71209510 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 3-130 |
| Cow position: | chr3:10152055-10151924 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-135 |
| Cow position: | chr3:2887314-2887182 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 42, 8 |
| Conread position: | 34-139 |
| Cow position: | chr3:34265245-34265140 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-139 |
| Cow position: | chr3:39155168-39155259 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 78 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 260-510 |
| Cow position: | chr3:27298785-27298539 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 99 |
| Conread position: | 264-540 |
| Cow position: | chr3:84393933-84394223 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 279-474 |
| Cow position: | chr3:2887174-2886974 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 25, 111 |
| Conread position: | 279-510 |
| Cow position: | chr3:33598814-33599055 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 279-590 |
| Cow position: | chr3:34265135-34264811 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 298-510 |
| Cow position: | chr3:74786833-74787043 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 315-510 |
| Cow position: | chr3:6904277-6904467 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 320-510 |
| Cow position: | chr3:29147656-29147473 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 320-591 |
| Cow position: | chr3:47695972-47696258 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 322-510 |
| Cow position: | chr3:82265916-82266102 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 337-510 |
| Cow position: | chr3:81858007-81858176 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 143 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 343-592 |
| Cow position: | chr3:52015507-52015761 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 105 |
| Conread position: | 346-510 |
| Cow position: | chr3:8004632-8004467 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 356-513 |
| Cow position: | chr3:2882064-2881906 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 100, 120 |
| Conread position: | 368-510 |
| Cow position: | chr3:42062732-42062874 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.