Cow genome map

Conread name: rcbl0_018126.y1

Conread position: 1-169
Cow position: chr1:31235069-31234892 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 1-172
Cow position: chr1:3035134-3034957 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 1-193
Cow position: chr1:54199525-54199316 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 1-201
Cow position: chr1:57305691-57305890 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 57

Conread position: 1-205
Cow position: chr1:102647414-102647198 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 1-207
Cow position: chr1:77620410-77620627 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 112

Conread position: 1-209
Cow position: chr1:9470539-9470318 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 27

Conread position: 1-211
Cow position: chr1:79590963-79591179 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 1-213
Cow position: chr1:46030498-46030278 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 1-213
Cow position: chr1:79165227-79165000 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 37, 190

Conread position: 1-213
Cow position: chr1:98310924-98311155 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 1-214
Cow position: chr1:6788427-6788199 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 97, 0

Conread position: 1-214
Cow position: chr1:71748148-71747936 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 94, 35

Conread position: 1-218
Cow position: chr1:7186651-7186876 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 37, 125

Conread position: 1-218
Cow position: chr1:11832905-11832691 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 123, 72

Conread position: 1-218
Cow position: chr1:51981090-51981310 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 57

Conread position: 1-218
Cow position: chr1:71305550-71305769 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 42

Conread position: 1-219
Cow position: chr1:39418263-39418022 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 1-221
Cow position: chr1:11226383-11226157 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 86

Conread position: 1-222
Cow position: chr1:40192824-40192608 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 37

Conread position: 1-229
Cow position: chr1:43703266-43703508 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 96, 0

Conread position: 1-230
Cow position: chr1:34686053-34686280 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 40

Conread position: 1-230
Cow position: chr1:34771645-34771403 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 93, 0

Conread position: 1-230
Cow position: chr1:54156879-54156635 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 48, 193

Conread position: 1-232
Cow position: chr1:14206297-14206051 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 30, 178

Conread position: 1-232
Cow position: chr1:63434947-63434704 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 27

Conread position: 1-233
Cow position: chr1:75141861-75142100 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 112

Conread position: 1-233
Cow position: chr1:81563595-81563848 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 1-235
Cow position: chr1:43352798-43352552 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 28

Conread position: 1-235
Cow position: chr1:74084338-74084087 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 198

Conread position: 1-235
Cow position: chr1:96964179-96964420 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 36, 23

Conread position: 1-235
Cow position: chr1:99609226-99609472 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 158

Conread position: 1-238
Cow position: chr1:27380333-27380564 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 105

Conread position: 1-239
Cow position: chr1:76436350-76436589 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 96, 37

Conread position: 1-239
Cow position: chr1:93528553-93528810 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 38, 168

Conread position: 1-240
Cow position: chr1:24581442-24581686 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 85, 55

Conread position: 1-240
Cow position: chr1:35162266-35162520 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 1-240
Cow position: chr1:39510191-39509948 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 12, 86

Conread position: 1-240
Cow position: chr1:46218440-46218683 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 72, 54

Conread position: 1-240
Cow position: chr1:65318434-65318684 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 68

Conread position: 1-241
Cow position: chr1:3923936-3923689 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 1-241
Cow position: chr1:4032484-4032743 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 1-241
Cow position: chr1:4291017-4291275 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 31, 190

Conread position: 1-241
Cow position: chr1:6941324-6941579 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 94, 36

Conread position: 1-241
Cow position: chr1:6958737-6958992 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 94, 36

Conread position: 1-241
Cow position: chr1:7748076-7748324 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 1-241
Cow position: chr1:7752242-7752490 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 1-241
Cow position: chr1:20667883-20667632 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 97, 244

Conread position: 1-241
Cow position: chr1:22192622-22192880 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 0

Conread position: 1-241
Cow position: chr1:24534395-24534146 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 96, 181

Conread position: 1-241
Cow position: chr1:33207012-33206769 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 99, 130

Conread position: 1-241
Cow position: chr1:36932016-36932265 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 94, 128

Conread position: 1-241
Cow position: chr1:49317638-49317385 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 1-241
Cow position: chr1:53308530-53308283 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 194
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 37, 21

Conread position: 1-241
Cow position: chr1:53369937-53370194 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 177

Conread position: 1-241
Cow position: chr1:55357427-55357184 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 167

Conread position: 1-241
Cow position: chr1:55429097-55428845 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 32, 44

Conread position: 1-241
Cow position: chr1:64804245-64803991 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 1-241
Cow position: chr1:65909385-65909621 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 37, 95

Conread position: 1-241
Cow position: chr1:68763823-68763577 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 94, 38

Conread position: 1-241
Cow position: chr1:74927739-74927995 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 76

Conread position: 1-241
Cow position: chr1:76613273-76613024 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 120

Conread position: 1-241
Cow position: chr1:87072563-87072806 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 42

Conread position: 1-241
Cow position: chr1:93554702-93554947 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 31, 84

Conread position: 1-241
Cow position: chr1:95215323-95215079 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 1-241
Cow position: chr1:96081343-96081590 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 85

Conread position: 1-241
Cow position: chr1:98413625-98413883 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 51, 68

Conread position: 1-241
Cow position: chr1:99570607-99570377 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 75

Conread position: 1-241
Cow position: chr1:101632480-101632226 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 96, 0

Conread position: 1-242
Cow position: chr1:31272582-31272330 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 1-243
Cow position: chr1:19482216-19481969 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 238

Conread position: 1-243
Cow position: chr1:22728910-22729169 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 1-243
Cow position: chr1:22827026-22827271 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 1-243
Cow position: chr1:33331226-33330981 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 94, 44

Conread position: 1-243
Cow position: chr1:37707106-37706864 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 23, 178

Conread position: 1-243
Cow position: chr1:41252539-41252297 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 99, 34

Conread position: 1-243
Cow position: chr1:47233620-47233365 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 1-243
Cow position: chr1:50931117-50930866 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 96, 74

Conread position: 1-243
Cow position: chr1:51445738-51445998 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 163

Conread position: 1-243
Cow position: chr1:52039495-52039749 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 79, 190

Conread position: 1-243
Cow position: chr1:69539556-69539804 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 96, 0

Conread position: 1-243
Cow position: chr1:74822314-74822564 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 80, 0

Conread position: 1-243
Cow position: chr1:81569172-81568915 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 98, 0

Conread position: 1-243
Cow position: chr1:101280857-101280625 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 0

Conread position: 1-244
Cow position: chr1:34159693-34159950 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 31, 0

Conread position: 1-245
Cow position: chr1:11914019-11913764 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 37, 234

Conread position: 1-249
Cow position: chr1:68845627-68845371 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 172

Conread position: 1-252
Cow position: chr1:72011951-72011691 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 37, 0

Conread position: 1-253
Cow position: chr1:21560893-21561135 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 37, 73

Conread position: 1-256
Cow position: chr1:6305006-6304737 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 250

Conread position: 1-256
Cow position: chr1:88338558-88338791 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 1-257
Cow position: chr1:91811646-91811902 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 69, 114

Conread position: 1-258
Cow position: chr1:23512796-23512531 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 81, 221

Conread position: 1-258
Cow position: chr1:28176862-28177128 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 48, 191

Conread position: 1-258
Cow position: chr1:52488104-52487857 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 84

Conread position: 1-258
Cow position: chr1:52496640-52496894 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 140

Conread position: 1-258
Cow position: chr1:91066294-91066024 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 98, 200

Conread position: 1-259
Cow position: chr1:20732562-20732832 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 75

Conread position: 1-260
Cow position: chr1:16962151-16961882 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 241

Conread position: 1-261
Cow position: chr1:65103496-65103745 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 71

Conread position: 1-261
Cow position: chr1:67821351-67821094 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 92, 17

Conread position: 1-263
Cow position: chr1:21787189-21787470 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 93, 0

Conread position: 1-263
Cow position: chr1:56477451-56477728 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 16

Conread position: 1-265
Cow position: chr1:81515102-81515362 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 81

Conread position: 1-300
Cow position: chr1:49839366-49839656 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 244, 35

Conread position: 2-233
Cow position: chr1:96277195-96276948 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 177

Conread position: 2-260
Cow position: chr1:3323721-3323997 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 243

Conread position: 3-172
Cow position: chr1:55163786-55163961 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 3-190
Cow position: chr1:427056-426870 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 94, 81

Conread position: 3-192
Cow position: chr1:24235656-24235457 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 3-196
Cow position: chr1:89508417-89508617 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 3-198
Cow position: chr1:1991560-1991350 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 54, 158

Conread position: 3-212
Cow position: chr1:57297334-57297564 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 0

Conread position: 3-212
Cow position: chr1:101551322-101551545 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 184

Conread position: 3-214
Cow position: chr1:97761485-97761684 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 3-219
Cow position: chr1:55135694-55135924 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 92, 54

Conread position: 3-221
Cow position: chr1:4374478-4374246 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 17

Conread position: 3-223
Cow position: chr1:40599904-40600138 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 3-223
Cow position: chr1:75382856-75383070 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 3-224
Cow position: chr1:44506828-44507067 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 3-230
Cow position: chr1:1981253-1981013 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 54

Conread position: 3-230
Cow position: chr1:3456731-3456950 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 3-230
Cow position: chr1:20204888-20205127 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 187

Conread position: 3-233
Cow position: chr1:4414347-4414106 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 90, 157

Conread position: 3-233
Cow position: chr1:101822643-101822411 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 86

Conread position: 3-235
Cow position: chr1:20384759-20384518 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 93, 70

Conread position: 3-238
Cow position: chr1:7350403-7350655 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 245

Conread position: 3-239
Cow position: chr1:61884780-61885022 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 75, 0

Conread position: 3-239
Cow position: chr1:97611792-97611548 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 48

Conread position: 3-239
Cow position: chr1:100705990-100706235 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 29, 168

Conread position: 3-240
Cow position: chr1:3167208-3166966 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 79, 174

Conread position: 3-240
Cow position: chr1:70380285-70380033 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 3-240
Cow position: chr1:77683218-77683462 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 3-241
Cow position: chr1:5135833-5135599 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 3-241
Cow position: chr1:21835806-21836042 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 86, 160

Conread position: 3-241
Cow position: chr1:36998053-36998296 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 35, 116

Conread position: 3-241
Cow position: chr1:55229845-55230087 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 35, 72

Conread position: 3-241
Cow position: chr1:68855031-68855276 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 3-241
Cow position: chr1:90976226-90975978 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 35, 238

Conread position: 3-241
Cow position: chr1:93499487-93499731 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 87, 64

Conread position: 3-241
Cow position: chr1:98461155-98461397 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 66, 23

Conread position: 3-241
Cow position: chr1:100421696-100421931 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 92, 25

Conread position: 3-242
Cow position: chr1:82884529-82884283 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 92, 208

Conread position: 3-242
Cow position: chr1:84812072-84811827 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 193
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 66, 41

Conread position: 3-242
Cow position: chr1:98551577-98551831 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 90, 243

Conread position: 3-243
Cow position: chr1:197143-196893 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 241

Conread position: 3-243
Cow position: chr1:1956467-1956222 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 66, 110

Conread position: 3-243
Cow position: chr1:5597337-5597098 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 104

Conread position: 3-243
Cow position: chr1:10632909-10633159 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 3-243
Cow position: chr1:12464805-12464551 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 90, 121

Conread position: 3-243
Cow position: chr1:24778124-24777881 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 23

Conread position: 3-243
Cow position: chr1:37322141-37321889 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 90, 188

Conread position: 3-243
Cow position: chr1:43389187-43388939 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 92, 10

Conread position: 3-243
Cow position: chr1:52913014-52912785 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 105, 50

Conread position: 3-243
Cow position: chr1:55705389-55705130 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 90, 183

Conread position: 3-243
Cow position: chr1:59518781-59519027 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 56, 183

Conread position: 3-243
Cow position: chr1:61005701-61005450 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 51, 196

Conread position: 3-243
Cow position: chr1:61742107-61741855 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 50, 180

Conread position: 3-243
Cow position: chr1:62964139-62964379 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 114, 50

Conread position: 3-243
Cow position: chr1:68619073-68618820 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 145

Conread position: 3-243
Cow position: chr1:68817938-68817686 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 92, 182

Conread position: 3-243
Cow position: chr1:69678461-69678212 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 60

Conread position: 3-243
Cow position: chr1:72304510-72304276 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 78, 0

Conread position: 3-243
Cow position: chr1:73960566-73960813 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 90, 206

Conread position: 3-243
Cow position: chr1:78096797-78097040 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 87, 0

Conread position: 3-243
Cow position: chr1:79844327-79844578 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 64, 40

Conread position: 3-243
Cow position: chr1:81913287-81913042 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 47, 175

Conread position: 3-243
Cow position: chr1:83583073-83582820 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 38

Conread position: 3-243
Cow position: chr1:84255619-84255880 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 3-243
Cow position: chr1:86110870-86110631 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 182

Conread position: 3-243
Cow position: chr1:87197688-87197933 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 3-243
Cow position: chr1:89497826-89498059 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 76, 135

Conread position: 3-243
Cow position: chr1:90621650-90621392 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 3-243
Cow position: chr1:93043890-93044130 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 66, 102

Conread position: 3-243
Cow position: chr1:95176800-95177050 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 69, 119

Conread position: 3-243
Cow position: chr1:98360544-98360291 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 32, 193

Conread position: 3-244
Cow position: chr1:52994888-52995140 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 41

Conread position: 3-244
Cow position: chr1:53458557-53458809 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 92, 181

Conread position: 3-244
Cow position: chr1:101789211-101788979 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 98, 0

Conread position: 3-245
Cow position: chr1:28678390-28678637 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 207

Conread position: 3-245
Cow position: chr1:75744721-75744977 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 90, 0

Conread position: 3-245
Cow position: chr1:85162683-85162432 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 3-247
Cow position: chr1:70828764-70829019 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 17

Conread position: 3-248
Cow position: chr1:64678562-64678811 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 69, 83

Conread position: 3-250
Cow position: chr1:74956161-74955901 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 175

Conread position: 3-251
Cow position: chr1:83072304-83072562 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 66, 0

Conread position: 3-253
Cow position: chr1:42874086-42873828 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 65, 250

Conread position: 3-255
Cow position: chr1:53520768-53521041 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 29, 0

Conread position: 3-257
Cow position: chr1:41056544-41056805 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 79, 28

Conread position: 3-258
Cow position: chr1:25383523-25383794 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 56, 155

Conread position: 3-258
Cow position: chr1:53397852-53398100 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 0

Conread position: 3-260
Cow position: chr1:88652491-88652767 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 90, 0

Conread position: 3-261
Cow position: chr1:18936969-18936711 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 32, 109

Conread position: 3-263
Cow position: chr1:8129106-8128835 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 57, 129

Conread position: 3-264
Cow position: chr1:89230367-89230100 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 90, 51

Conread position: 4-149
Cow position: chr1:24528746-24528602 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 4-178
Cow position: chr1:70028444-70028628 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 4-188
Cow position: chr1:93228387-93228583 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 4-192
Cow position: chr1:57396070-57395874 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 4-219
Cow position: chr1:85596800-85597027 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 116

Conread position: 4-221
Cow position: chr1:31934373-31934598 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 4-221
Cow position: chr1:42138729-42138949 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 18

Conread position: 4-221
Cow position: chr1:70026482-70026254 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 88, 0

Conread position: 4-221
Cow position: chr1:96365528-96365750 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 34

Conread position: 4-223
Cow position: chr1:19465919-19466146 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 90, 22

Conread position: 4-226
Cow position: chr1:26729586-26729809 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 34

Conread position: 4-231
Cow position: chr1:16855829-16855598 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 94, 80

Conread position: 4-231
Cow position: chr1:39427131-39426904 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 89, 32

Conread position: 4-233
Cow position: chr1:39069093-39068853 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 91, 0

Conread position: 4-233
Cow position: chr1:62291829-62291598 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 97, 171

Conread position: 4-233
Cow position: chr1:100800216-100800456 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 5

Conread position: 4-237
Cow position: chr1:102349893-102349643 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 185

Conread position: 4-239
Cow position: chr1:29935516-29935278 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 78, 33

Conread position: 4-240
Cow position: chr1:20950583-20950824 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 90, 140

Conread position: 4-240
Cow position: chr1:39225063-39224816 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 90, 43

Conread position: 4-240
Cow position: chr1:41115853-41115609 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 91, 175

Conread position: 4-240
Cow position: chr1:77880874-77880624 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 91, 175

Conread position: 4-241
Cow position: chr1:7739821-7740058 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 78, 10

Conread position: 4-241
Cow position: chr1:23969177-23968947 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 92

Conread position: 4-241
Cow position: chr1:34300687-34300440 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 91, 14

Conread position: 4-241
Cow position: chr1:48580992-48581239 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 237

Conread position: 4-241
Cow position: chr1:68253453-68253706 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 91, 0

Conread position: 4-241
Cow position: chr1:69264677-69264919 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 81

Conread position: 4-241
Cow position: chr1:78809742-78809987 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 97, 226

Conread position: 4-241
Cow position: chr1:90595693-90595459 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 93

Conread position: 4-241
Cow position: chr1:97231819-97232071 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 55

Conread position: 4-242
Cow position: chr1:89448759-89449012 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 91, 0

Conread position: 4-243
Cow position: chr1:8483-8728 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 4-243
Cow position: chr1:10778428-10778676 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 4-243
Cow position: chr1:24133196-24132950 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 91, 59

Conread position: 4-243
Cow position: chr1:42887403-42887164 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 4-243
Cow position: chr1:45555226-45555478 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 240

Conread position: 4-243
Cow position: chr1:78857459-78857216 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 60

Conread position: 4-243
Cow position: chr1:81290376-81290619 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 26

Conread position: 4-243
Cow position: chr1:89510060-89509808 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 91, 41

Conread position: 4-244
Cow position: chr1:30047732-30047489 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 81, 166

Conread position: 4-244
Cow position: chr1:94226689-94226441 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 94, 35

Conread position: 4-252
Cow position: chr1:81228478-81228213 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 238

Conread position: 4-255
Cow position: chr1:85550216-85549953 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 4-257
Cow position: chr1:51531627-51531878 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 88

Conread position: 4-257
Cow position: chr1:54732605-54732358 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 239, 24

Conread position: 4-258
Cow position: chr1:57575897-57575637 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 89, 116

Conread position: 4-258
Cow position: chr1:63530435-63530684 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 98

Conread position: 4-258
Cow position: chr1:97938828-97939081 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 133

Conread position: 4-259
Cow position: chr1:96472307-96472557 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 91, 174

Conread position: 4-262
Cow position: chr1:43311911-43311639 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 89, 5

Conread position: 5-175
Cow position: chr1:95017656-95017484 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 144
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 85, 105

Conread position: 5-193
Cow position: chr1:8984823-8984619 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 5-212
Cow position: chr1:31414098-31413890 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 96, 0

Conread position: 5-228
Cow position: chr1:69540164-69540380 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 71

Conread position: 5-229
Cow position: chr1:87211808-87212032 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 97, 38

Conread position: 5-239
Cow position: chr1:7971284-7971521 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 85, 51

Conread position: 5-241
Cow position: chr1:2075477-2075241 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 90, 104

Conread position: 5-241
Cow position: chr1:23186934-23186688 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 63

Conread position: 5-241
Cow position: chr1:97778861-97779102 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 23, 108

Conread position: 5-241
Cow position: chr1:101834687-101834926 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 90, 58

Conread position: 5-242
Cow position: chr1:45289009-45288758 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 19

Conread position: 5-242
Cow position: chr1:70538470-70538723 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 90, 0

Conread position: 5-243
Cow position: chr1:42175587-42175840 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 88, 138

Conread position: 5-243
Cow position: chr1:43505387-43505642 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 90, 0

Conread position: 5-243
Cow position: chr1:64572376-64572628 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 5-243
Cow position: chr1:82936723-82936484 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 64, 81

Conread position: 5-243
Cow position: chr1:88913181-88913432 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 90, 196

Conread position: 5-244
Cow position: chr1:95499629-95499382 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 19

Conread position: 5-246
Cow position: chr1:12978543-12978798 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 90, 0

Conread position: 5-247
Cow position: chr1:71295448-71295175 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 5-250
Cow position: chr1:70434866-70435117 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 155

Conread position: 5-250
Cow position: chr1:83747809-83748061 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 180

Conread position: 5-258
Cow position: chr1:8349454-8349200 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 167

Conread position: 6-185
Cow position: chr1:100770887-100770697 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 6-204
Cow position: chr1:79278583-79278373 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 182

Conread position: 6-223
Cow position: chr1:102266409-102266175 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 6-233
Cow position: chr1:18780470-18780226 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 39

Conread position: 6-233
Cow position: chr1:71079092-71078857 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 89, 24

Conread position: 6-233
Cow position: chr1:81355842-81355600 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 31

Conread position: 6-238
Cow position: chr1:53622823-53623063 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 26, 157

Conread position: 6-241
Cow position: chr1:48730960-48730721 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 28, 14

Conread position: 6-241
Cow position: chr1:53425038-53425288 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 0

Conread position: 6-241
Cow position: chr1:54478188-54478440 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 6-241
Cow position: chr1:68862897-68863142 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 179

Conread position: 6-241
Cow position: chr1:76019829-76019586 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 50

Conread position: 6-241
Cow position: chr1:81613253-81613500 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 6-241
Cow position: chr1:82337917-82337669 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 89, 172

Conread position: 6-243
Cow position: chr1:724602-724853 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 15

Conread position: 6-243
Cow position: chr1:97954595-97954355 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 76, 110

Conread position: 6-300
Cow position: chr1:94261406-94261706 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 40

Conread position: 7-240
Cow position: chr1:26702343-26702097 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 171

Conread position: 7-240
Cow position: chr1:49433397-49433154 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 31, 58

Conread position: 7-241
Cow position: chr1:11729046-11729286 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 86, 0

Conread position: 7-241
Cow position: chr1:54258428-54258677 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 209

Conread position: 7-241
Cow position: chr1:64302383-64302132 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 82, 0

Conread position: 7-241
Cow position: chr1:100551833-100552086 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 7-242
Cow position: chr1:52956118-52956363 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 182

Conread position: 7-242
Cow position: chr1:98703041-98703273 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 6

Conread position: 7-243
Cow position: chr1:91875043-91874804 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 86, 11

Conread position: 7-263
Cow position: chr1:100393296-100393032 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 135

Conread position: 7-264
Cow position: chr1:81868861-81868595 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 235

Conread position: 7-270
Cow position: chr1:38401659-38401937 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 88, 181

Conread position: 8-222
Cow position: chr1:5023890-5023670 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 75, 0

Conread position: 8-235
Cow position: chr1:94212099-94212330 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 221

Conread position: 9-169
Cow position: chr1:12871143-12870970 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 9-212
Cow position: chr1:31348050-31347852 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 95

Conread position: 9-219
Cow position: chr1:101946843-101946625 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 84, 0

Conread position: 9-233
Cow position: chr1:9534038-9534265 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 23, 177

Conread position: 9-240
Cow position: chr1:89349829-89350075 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 9-241
Cow position: chr1:37309647-37309408 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 30, 0

Conread position: 9-243
Cow position: chr1:78838665-78838908 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 80, 164

Conread position: 9-243
Cow position: chr1:85028825-85029067 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 60, 115

Conread position: 9-243
Cow position: chr1:85774327-85774570 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 10-241
Cow position: chr1:71253685-71253445 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 85, 177

Conread position: 10-243
Cow position: chr1:17196761-17196514 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 11

Conread position: 10-260
Cow position: chr1:18414585-18414341 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 50, 28

Conread position: 10-261
Cow position: chr1:3720566-3720312 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 215

Conread position: 11-228
Cow position: chr1:78079596-78079817 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 46

Conread position: 11-239
Cow position: chr1:79640421-79640179 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 24

Conread position: 12-242
Cow position: chr1:89381144-89381387 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 85, 125

Conread position: 13-240
Cow position: chr1:93810300-93810539 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 78, 0

Conread position: 14-241
Cow position: chr1:72286185-72285957 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 17-241
Cow position: chr1:20099246-20099476 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 146

Conread position: 18-242
Cow position: chr1:100324867-100324639 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 20

Conread position: 18-254
Cow position: chr1:20104144-20104390 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 75, 0

Conread position: 21-238
Cow position: chr1:7442861-7443083 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 11, 208

Conread position: 22-235
Cow position: chr1:87888278-87888493 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 99

Conread position: 22-261
Cow position: chr1:3790186-3789939 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 134

Conread position: 23-212
Cow position: chr1:261598-261400 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 159

Conread position: 23-243
Cow position: chr1:89388224-89388457 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 25-261
Cow position: chr1:66898615-66898370 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 13, 97

Conread position: 26-241
Cow position: chr1:6826405-6826188 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 73, 149

Conread position: 26-241
Cow position: chr1:58036915-58037129 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 82

Conread position: 27-233
Cow position: chr1:52052835-52052614 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 12

Conread position: 27-235
Cow position: chr1:42482087-42482301 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 188

Conread position: 28-268
Cow position: chr1:55818945-55819185 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 149

Conread position: 30-242
Cow position: chr1:56618763-56618543 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 178

Conread position: 30-243
Cow position: chr1:7023008-7023234 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 58, 0

Conread position: 30-243
Cow position: chr1:10716390-10716609 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 49, 112

Conread position: 30-243
Cow position: chr1:78794337-78794118 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 30-244
Cow position: chr1:41138244-41138030 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 90

Conread position: 30-258
Cow position: chr1:56225681-56225913 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 31-217
Cow position: chr1:87936788-87936985 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 67, 148

Conread position: 31-241
Cow position: chr1:3352805-3352589 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 67, 129

Conread position: 31-241
Cow position: chr1:61543029-61542808 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 66, 150

Conread position: 31-241
Cow position: chr1:80422169-80422383 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 136

Conread position: 31-241
Cow position: chr1:81582011-81582225 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 200

Conread position: 31-243
Cow position: chr1:69695103-69694880 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 64, 134

Conread position: 32-243
Cow position: chr1:67688691-67688470 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 172

Conread position: 32-243
Cow position: chr1:72356248-72356469 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 126, 0

Conread position: 32-244
Cow position: chr1:92989479-92989704 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 33-241
Cow position: chr1:81580066-81580288 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 161

Conread position: 37-230
Cow position: chr1:67919042-67919235 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 73, 26

Conread position: 39-241
Cow position: chr1:24406997-24406786 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 40-233
Cow position: chr1:19227157-19226954 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 41-240
Cow position: chr1:33997019-33996814 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 41-243
Cow position: chr1:98583662-98583866 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 85

Conread position: 41-244
Cow position: chr1:71350824-71350613 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 41-264
Cow position: chr1:89076730-89076499 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 43-241
Cow position: chr1:98511829-98512037 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 55, 191

Conread position: 45-235
Cow position: chr1:60986896-60987093 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 192

Conread position: 47-231
Cow position: chr1:73756341-73756150 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 141

Conread position: 47-232
Cow position: chr1:30504420-30504603 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 29, 57

Conread position: 48-241
Cow position: chr1:22730651-22730845 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 62, 35

Conread position: 48-241
Cow position: chr1:30418132-30417937 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 104

Conread position: 48-241
Cow position: chr1:77425008-77425213 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 48-242
Cow position: chr1:45670544-45670744 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 39, 131

Conread position: 48-258
Cow position: chr1:46783225-46783439 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 51, 127

Conread position: 50-243
Cow position: chr1:80841560-80841759 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 52-243
Cow position: chr1:50991844-50992046 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 43, 0

Conread position: 57-241
Cow position: chr1:31819035-31819217 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 115

Conread position: 59-243
Cow position: chr1:90904837-90904643 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 59-260
Cow position: chr1:48769720-48769932 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 62-243
Cow position: chr1:43822334-43822512 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 49

Conread position: 62-248
Cow position: chr1:30983557-30983378 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 18

Conread position: 71-241
Cow position: chr1:102648214-102648389 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 73-232
Cow position: chr1:60466168-60466331 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 75-222
Cow position: chr1:32044021-32043877 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 47

Conread position: 75-223
Cow position: chr1:93577342-93577194 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 133

Conread position: 75-233
Cow position: chr1:69482004-69481845 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 75-237
Cow position: chr1:96583653-96583486 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 75-241
Cow position: chr1:39121892-39121726 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 102

Conread position: 75-241
Cow position: chr1:62235500-62235336 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 128, 30

Conread position: 75-241
Cow position: chr1:95557984-95558148 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 75-243
Cow position: chr1:25281713-25281544 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 0

Conread position: 75-243
Cow position: chr1:33998704-33998869 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 75-260
Cow position: chr1:68826957-68826780 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 170, 34

Conread position: 76-241
Cow position: chr1:43312084-43311920 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 77-227
Cow position: chr1:9143669-9143815 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 21

Conread position: 77-247
Cow position: chr1:7907985-7908152 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 80-241
Cow position: chr1:65881758-65881916 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 84-241
Cow position: chr1:28470781-28470941 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 25

Conread position: 87-241
Cow position: chr1:32001360-32001210 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 83

Conread position: 89-241
Cow position: chr1:45223540-45223692 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 89-241
Cow position: chr1:82880605-82880755 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 89-253
Cow position: chr1:89835210-89835374 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 106

Conread position: 90-217
Cow position: chr1:71665972-71665845 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 90-224
Cow position: chr1:89485539-89485674 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 90-229
Cow position: chr1:31357549-31357411 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 90-232
Cow position: chr1:101507321-101507461 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 90-241
Cow position: chr1:8347086-8347234 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 90-241
Cow position: chr1:60044948-60045095 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 90-241
Cow position: chr1:68672637-68672491 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 90-241
Cow position: chr1:77739679-77739832 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 136

Conread position: 90-241
Cow position: chr1:84768917-84768768 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 125
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 90-241
Cow position: chr1:95835835-95835687 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 90-241
Cow position: chr1:100474194-100474345 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 127
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 90-242
Cow position: chr1:62997759-62997908 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 90-243
Cow position: chr1:5580021-5580168 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 90-243
Cow position: chr1:30189109-30189265 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 132
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 6, 0

Conread position: 90-243
Cow position: chr1:79003936-79004084 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 11, 22

Conread position: 90-243
Cow position: chr1:92590157-92590304 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 91-240
Cow position: chr1:34856667-34856518 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 91-241
Cow position: chr1:186312-186170 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 91-241
Cow position: chr1:45478898-45478752 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 0

Conread position: 91-242
Cow position: chr1:76658116-76657955 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 138
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 72, 0

Conread position: 92-231
Cow position: chr1:82513392-82513252 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 92-235
Cow position: chr1:73020700-73020558 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 21

Conread position: 92-240
Cow position: chr1:5155256-5155109 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 13, 21

Conread position: 92-243
Cow position: chr1:48214194-48214045 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 16, 84

Conread position: 92-244
Cow position: chr1:21093079-21093230 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 130, 0

Conread position: 93-218
Cow position: chr1:6287111-6287236 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 26

Conread position: 93-241
Cow position: chr1:37726456-37726308 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 14

Conread position: 93-243
Cow position: chr1:3882496-3882346 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 93-243
Cow position: chr1:46143499-46143349 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 83

Conread position: 93-254
Cow position: chr1:99605223-99605063 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 94-240
Cow position: chr1:100450208-100450066 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 15

Conread position: 94-243
Cow position: chr1:67654356-67654207 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 95-241
Cow position: chr1:65028499-65028645 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 95-241
Cow position: chr1:71916153-71916009 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 95-242
Cow position: chr1:81481416-81481270 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 95-258
Cow position: chr1:874618-874778 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 128

Conread position: 96-240
Cow position: chr1:4581365-4581220 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 96-246
Cow position: chr1:57090944-57091094 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 99-241
Cow position: chr1:19515651-19515508 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 101-241
Cow position: chr1:62034857-62034718 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 101-258
Cow position: chr1:73936173-73936020 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 15

Conread position: 102-210
Cow position: chr1:74832394-74832501 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 103-241
Cow position: chr1:19962027-19962161 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 103-241
Cow position: chr1:76735506-76735370 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 67

Conread position: 103-255
Cow position: chr1:83783958-83783805 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 104-241
Cow position: chr1:67529029-67529166 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 104-255
Cow position: chr1:40935793-40935640 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 135, 0

Conread position: 105-207
Cow position: chr1:69061593-69061696 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 105-241
Cow position: chr1:3965811-3965944 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 105-241
Cow position: chr1:5006137-5006272 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 115
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 105-243
Cow position: chr1:89342011-89341867 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 105-244
Cow position: chr1:41027050-41027188 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 105-253
Cow position: chr1:83618633-83618480 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 106-235
Cow position: chr1:81629872-81629744 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 106-241
Cow position: chr1:26895835-26895700 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 14

Conread position: 106-241
Cow position: chr1:36875006-36875137 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 106-243
Cow position: chr1:77232602-77232465 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 108-240
Cow position: chr1:88111853-88111981 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 109-213
Cow position: chr1:12082825-12082931 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 109-225
Cow position: chr1:15206893-15206778 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 109-232
Cow position: chr1:99071109-99071234 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 109-240
Cow position: chr1:84010751-84010877 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 109-241
Cow position: chr1:3914939-3914808 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 109-241
Cow position: chr1:38706875-38706743 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 109-241
Cow position: chr1:54157273-54157407 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 116
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 109-241
Cow position: chr1:79660423-79660291 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-241
Cow position: chr1:86578944-86579073 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 109-241
Cow position: chr1:98897715-98897583 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 109-243
Cow position: chr1:66752650-66752516 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 114
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 109-243
Cow position: chr1:93590607-93590473 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 109-244
Cow position: chr1:97144484-97144352 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 7

Conread position: 109-245
Cow position: chr1:24542590-24542455 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 109-258
Cow position: chr1:30136373-30136226 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 109-288
Cow position: chr1:45575913-45576091 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 143, 14

Conread position: 110-241
Cow position: chr1:49980690-49980820 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 110-244
Cow position: chr1:44125656-44125524 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 66

Conread position: 111-216
Cow position: chr1:57089698-57089593 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 112-233
Cow position: chr1:78068087-78067966 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 112-240
Cow position: chr1:74081999-74081871 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 112-241
Cow position: chr1:95618624-95618753 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 114-241
Cow position: chr1:242541-242668 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 114-241
Cow position: chr1:45315652-45315525 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 108
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 114-243
Cow position: chr1:3417332-3417468 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 114-258
Cow position: chr1:56711615-56711477 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 115-241
Cow position: chr1:24561524-24561398 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 115-241
Cow position: chr1:24570962-24570836 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 115-241
Cow position: chr1:45874093-45873959 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 114
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 115-241
Cow position: chr1:61011166-61011292 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 108
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 119-243
Cow position: chr1:759429-759305 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 119-243
Cow position: chr1:31855258-31855134 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 120-243
Cow position: chr1:62036792-62036915 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 120-243
Cow position: chr1:68688573-68688696 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 121-241
Cow position: chr1:3942224-3942105 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 122-223
Cow position: chr1:92032615-92032515 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 124-243
Cow position: chr1:48618250-48618131 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 125-243
Cow position: chr1:100852704-100852822 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 128-243
Cow position: chr1:52429662-52429547 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 131-243
Cow position: chr1:102730761-102730649 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 132-243
Cow position: chr1:53640717-53640825 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 133-243
Cow position: chr1:30948995-30949103 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 133-243
Cow position: chr1:32857035-32857151 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 133-243
Cow position: chr1:55685975-55685865 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 133-276
Cow position: chr1:69185719-69185584 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 134-233
Cow position: chr1:83067043-83066944 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 134-244
Cow position: chr1:62469065-62469174 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 136-233
Cow position: chr1:71946078-71945981 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 136-245
Cow position: chr1:70483328-70483219 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 138-263
Cow position: chr1:89835724-89835853 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 139-256
Cow position: chr1:55194237-55194120 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 144-243
Cow position: chr1:84288417-84288516 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 144-243
Cow position: chr1:85339401-85339497 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 150-243
Cow position: chr1:42353181-42353272 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 153-261
Cow position: chr1:100746828-100746721 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 0

Show alignments to all cow chromosomes.