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Cow genome map

           
Conread name:
           
rcbl0_018126.y1
        

               
Conread position:
               
1-93
               

               
Cow position:
               
chr4:36724883-36724975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr4:56233532-56233691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr4:480160-479994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr4:46720319-46720140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr4:53209082-53209269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr4:1354773-1354575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr4:123352-123159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr4:21371235-21371450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr4:28543756-28543552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:15439424-15439641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr4:68362779-68362987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr4:25359453-25359665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:33623563-33623784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 125
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:4843402-4843169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:34171725-34171507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:51739864-51739642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 165
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr4:44973481-44973715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
48, 140
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr4:48321869-48322116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:45711214-45711444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 84
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr4:44612847-44613092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr4:68233821-68234059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr4:11099824-11099567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr4:45644463-45644229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
92, 180
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr4:62471917-62472168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:2099478-2099721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
33, 232
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr4:29238194-29237950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 125
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr4:13974124-13973874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:5999344-5999099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:19313853-19314109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:23646998-23646765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:26400805-26401052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:49629328-49629578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:12004065-12004312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 171
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:13668783-13668524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:13871764-13872001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
200, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:13941304-13941554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:19584553-19584801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:22073471-22073226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:22713646-22713396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 204
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:23451253-23450996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:23509437-23509691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
37, 193
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:29805525-29805276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 173
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:34310606-34310362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:44782218-44782472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 173
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:44839040-44838797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:45583278-45583025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 177
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:45685313-45685555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:47510235-47510482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
95, 181
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:48172983-48173234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:65650280-65650036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:16881518-16881262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
91, 217
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:54190933-54191188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 167
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:19699951-19700195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
94, 174
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:29291364-29291614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
92, 161
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:34641881-34641627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:37915493-37915236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
92, 169
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:42922007-42921760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 182
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:43515571-43515816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 155
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:45738633-45738375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:53208140-53208393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:63965145-63964891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 197
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:48104728-48104468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:48235488-48235736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:13344391-13344647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 236
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr4:11872063-11871808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 108
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr4:15904943-15905213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
82, 245
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr4:30791813-30792079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 151
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr4:42481035-42481292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 202
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr4:69406217-69406460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr4:32726071-32726337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 250
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr4:51768957-51769220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:53100654-53100919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
52, 248
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr4:35940162-35939933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr4:14352826-14352612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr4:5461016-5460775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr4:10732068-10732321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr4:42423952-42423705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr4:509057-508796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 114
               

               
Conread position:
               
3-141
               

               
Cow position:
               
chr4:41907945-41907803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr4:19142139-19142328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr4:27540468-27540680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr4:63349630-63349420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr4:46552473-46552267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr4:11331939-11332172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr4:24744562-24744330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr4:66256528-66256765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr4:8947240-8947476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
97, 178
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr4:53346173-53346408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr4:16602206-16601973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 170
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr4:63459365-63459127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr4:4185971-4186217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 161
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr4:24002119-24001870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr4:20765-21010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr4:19501237-19500994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr4:20147033-20147281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr4:23847201-23846954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
92, 161
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr4:36893204-36893457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr4:37691466-37691214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr4:41301144-41300900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 174
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr4:46058905-46058679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 130
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr4:46591511-46591765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr4:20842771-20843016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr4:21391966-21391713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
92, 154
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr4:34022740-34022486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr4:35981840-35982097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
94, 230
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr4:36841130-36841364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
82, 119
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:3268485-3268265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:3340798-3341052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:3850403-3850651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:7430170-7430420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:10915990-10915737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
65, 239
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:17186506-17186251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
62, 150
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:17774507-17774250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:19435107-19435355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:19597469-19597224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:27529964-27530218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:28772220-28771967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:33097129-33096882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
78, 109
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:36290475-36290724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:38944414-38944158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
44, 167
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:44449659-44449409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:46477088-46476846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:46550235-46550484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:48961633-48961386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
76, 182
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:52748611-52748358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
92, 191
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:54479057-54478822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:61897689-61897435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:66172951-66172691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr4:68457050-68456820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
232, 66
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr4:9815501-9815247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
90, 244
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr4:48152517-48152274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr4:21531797-21531542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 146
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr4:28839472-28839719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr4:31506185-31505924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 248
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr4:47348674-47348930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
94, 176
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr4:59277629-59277370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 187
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr4:3251685-3251433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
166, 73
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr4:25984073-25984333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr4:1026378-1026125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
75, 152
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr4:7808433-7808683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 145
               

               
Conread position:
               
3-258
               

               
Cow position:
               
chr4:3421474-3421737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
3-258
               

               
Cow position:
               
chr4:59377761-59378020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 112
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr4:19423235-19423415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr4:26469495-26469668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr4:38799346-38799149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 165
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr4:21064886-21065111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr4:23854044-23854255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr4:22741564-22741338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
4-223
               

               
Cow position:
               
chr4:22345170-22344942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 182
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr4:59871333-59871562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
74, 164
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr4:20139673-20139429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr4:34630742-34630988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr4:12127794-12127543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr4:45662660-45662417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr4:13589935-13590180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr4:45775499-45775241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr4:51784026-51784276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 121
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr4:3388392-3388641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 216
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr4:5610223-5609997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr4:7704473-7704227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr4:9925784-9925531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr4:10056056-10056302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 184
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr4:29384374-29384137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
82, 166
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr4:41186058-41185822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr4:49794517-49794757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr4:59785165-59785420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr4:65179280-65179048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
160, 68
               

               
Conread position:
               
4-243
               

               
Cow position:
               
chr4:10378956-10379211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
4-243
               

               
Cow position:
               
chr4:54111595-54111841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
55, 189
               

               
Conread position:
               
4-244
               

               
Cow position:
               
chr4:61313360-61313112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr4:22842195-22842456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
67, 239
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr4:2602079-2602341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 193
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr4:18974279-18974534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 224
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr4:22101412-22101154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
93, 227
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr4:24810593-24810335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
91, 176
               

               
Conread position:
               
4-260
               

               
Cow position:
               
chr4:8413270-8413008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
4-260
               

               
Cow position:
               
chr4:45952522-45952275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 124
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr4:41602697-41602970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr4:43866010-43865739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr4:32249403-32249214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr4:64072500-64072304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 154
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr4:65841913-65841696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 163
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr4:66118677-66118458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr4:5797821-5798051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
51, 202
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr4:51605759-51605524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr4:55395609-55395851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 208
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr4:65919462-65919698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 175
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr4:62772076-62771828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr4:54455494-54455247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
90, 183
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr4:3837132-3837373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr4:12049094-12049344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
80, 183
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr4:12591365-12591116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr4:34383498-34383244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
32, 175
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr4:23600027-23600267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr4:26659153-26659400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
72, 127
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr4:63096224-63095974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr4:36731043-36731291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr4:51727925-51728180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr4:62921013-62920771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 183
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr4:11496783-11496549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr4:61391355-61391123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr4:45077225-45076971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
50, 228
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr4:47262381-47262644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 232
               

               
Conread position:
               
6-221
               

               
Cow position:
               
chr4:33091229-33091451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr4:11021805-11021571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr4:27632300-27632523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
89, 171
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr4:13142691-13142477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
6-240
               

               
Cow position:
               
chr4:14414493-14414250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 117
               

               
Conread position:
               
6-240
               

               
Cow position:
               
chr4:19582767-19582521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
93, 179
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr4:10968537-10968291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 171
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr4:37935434-37935187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 36
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr4:46597225-46597466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr4:56240000-56239762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr4:13255938-13256177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
89, 166
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr4:19316151-19315907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr4:49158935-49158695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr4:53134459-53134703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr4:68889707-68889461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
6-254
               

               
Cow position:
               
chr4:68805880-68806121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
6-258
               

               
Cow position:
               
chr4:48485854-48486109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr4:4084598-4084328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr4:54524479-54524245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 158
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr4:65175288-65174987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 243
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr4:6653582-6653819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 103
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr4:25369973-25370202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr4:36577777-36577529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
84, 110
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr4:56570658-56570904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
9-243
               

               
Cow position:
               
chr4:395787-396031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 205
               

               
Conread position:
               
9-243
               

               
Cow position:
               
chr4:33971045-33970797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
9-244
               

               
Cow position:
               
chr4:49089641-49089887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
9-244
               

               
Cow position:
               
chr4:54171475-54171727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
9-245
               

               
Cow position:
               
chr4:25356454-25356218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
9-245
               

               
Cow position:
               
chr4:60897423-60897181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr4:21874669-21874909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
9-260
               

               
Cow position:
               
chr4:52087788-52088039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
10-150
               

               
Cow position:
               
chr4:46275044-46275185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
10-243
               

               
Cow position:
               
chr4:3283593-3283347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
10-243
               

               
Cow position:
               
chr4:19408146-19407898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
81, 203
               

               
Conread position:
               
10-243
               

               
Cow position:
               
chr4:54927586-54927340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
11-233
               

               
Cow position:
               
chr4:18756288-18756524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
11-243
               

               
Cow position:
               
chr4:37313025-37313265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
11-257
               

               
Cow position:
               
chr4:4826980-4827242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
12-239
               

               
Cow position:
               
chr4:58881107-58880865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
15-241
               

               
Cow position:
               
chr4:37732629-37732385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
17-197
               

               
Cow position:
               
chr4:52307751-52307568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 130
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr4:39231655-39231460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
18-260
               

               
Cow position:
               
chr4:38952414-38952673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
20-212
               

               
Cow position:
               
chr4:13771525-13771332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
20-232
               

               
Cow position:
               
chr4:22196327-22196126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
20-244
               

               
Cow position:
               
chr4:52779716-52779952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
25-218
               

               
Cow position:
               
chr4:57584376-57584167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
25-242
               

               
Cow position:
               
chr4:4319278-4319052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
28-243
               

               
Cow position:
               
chr4:47280010-47280227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 104
               

               
Conread position:
               
29-241
               

               
Cow position:
               
chr4:39609606-39609815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
30-243
               

               
Cow position:
               
chr4:19578277-19578487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
31-241
               

               
Cow position:
               
chr4:13222307-13222089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
31-243
               

               
Cow position:
               
chr4:45073939-45074159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 142
               

               
Conread position:
               
32-235
               

               
Cow position:
               
chr4:12901678-12901467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
32-241
               

               
Cow position:
               
chr4:53125994-53126209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
33-241
               

               
Cow position:
               
chr4:45596134-45595934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
34-241
               

               
Cow position:
               
chr4:37675493-37675711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 126
               

               
Conread position:
               
38-243
               

               
Cow position:
               
chr4:11380166-11380379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
39-254
               

               
Cow position:
               
chr4:45724757-45724978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 143
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr4:16239265-16239070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr4:46494181-46494401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
41-255
               

               
Cow position:
               
chr4:213904-214126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 150
               

               
Conread position:
               
44-219
               

               
Cow position:
               
chr4:45013276-45013094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
51, 136
               

               
Conread position:
               
45-255
               

               
Cow position:
               
chr4:41899870-41900075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 141
               

               
Conread position:
               
48-240
               

               
Cow position:
               
chr4:16814284-16814479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
48-244
               

               
Cow position:
               
chr4:10851543-10851350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
56-258
               

               
Cow position:
               
chr4:40995643-40995841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
59-224
               

               
Cow position:
               
chr4:1890852-1890685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
59-239
               

               
Cow position:
               
chr4:34700108-34699938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
134, 21
               

               
Conread position:
               
62-243
               

               
Cow position:
               
chr4:19333303-19333486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
66-241
               

               
Cow position:
               
chr4:61757590-61757759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
75-241
               

               
Cow position:
               
chr4:20142974-20142814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
75-241
               

               
Cow position:
               
chr4:32693718-32693886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
75-241
               

               
Cow position:
               
chr4:45636100-45636264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
75-241
               

               
Cow position:
               
chr4:45705979-45706137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
75-241
               

               
Cow position:
               
chr4:54921154-54920992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
161, 34
               

               
Conread position:
               
75-242
               

               
Cow position:
               
chr4:19292654-19292820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
160, 28
               

               
Conread position:
               
75-243
               

               
Cow position:
               
chr4:34369518-34369350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-243
               

               
Cow position:
               
chr4:60443105-60442943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
79-219
               

               
Cow position:
               
chr4:47028421-47028559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
85-243
               

               
Cow position:
               
chr4:66136662-66136508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
87-241
               

               
Cow position:
               
chr4:45910033-45909880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
89-232
               

               
Cow position:
               
chr4:46487896-46487752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
89-243
               

               
Cow position:
               
chr4:26012343-26012500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
89-243
               

               
Cow position:
               
chr4:26830649-26830806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
90-224
               

               
Cow position:
               
chr4:9825775-9825640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
90-230
               

               
Cow position:
               
chr4:48422824-48422964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
90-233
               

               
Cow position:
               
chr4:41292003-41291864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
90-240
               

               
Cow position:
               
chr4:45563691-45563843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
90-241
               

               
Cow position:
               
chr4:19098414-19098570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
90-241
               

               
Cow position:
               
chr4:34562328-34562479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
90-241
               

               
Cow position:
               
chr4:44773095-44772945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
90-242
               

               
Cow position:
               
chr4:22010108-22009959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
90-243
               

               
Cow position:
               
chr4:19430309-19430465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
90-243
               

               
Cow position:
               
chr4:34509787-34509940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
90-243
               

               
Cow position:
               
chr4:46435271-46435424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
90-247
               

               
Cow position:
               
chr4:65173049-65173206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
90-254
               

               
Cow position:
               
chr4:49826199-49826362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
91-250
               

               
Cow position:
               
chr4:9085-8927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
92-241
               

               
Cow position:
               
chr4:8182691-8182539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
92-242
               

               
Cow position:
               
chr4:65131505-65131354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
92-243
               

               
Cow position:
               
chr4:4085169-4085011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
92-258
               

               
Cow position:
               
chr4:19199339-19199176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 132
               

               
Conread position:
               
92-258
               

               
Cow position:
               
chr4:34503242-34503407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
93-241
               

               
Cow position:
               
chr4:9444737-9444589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
93-241
               

               
Cow position:
               
chr4:42232072-42231926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
93-241
               

               
Cow position:
               
chr4:51920494-51920642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
94-238
               

               
Cow position:
               
chr4:61478555-61478700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
95-243
               

               
Cow position:
               
chr4:60363304-60363448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
96-240
               

               
Cow position:
               
chr4:28753584-28753719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
96-242
               

               
Cow position:
               
chr4:44903248-44903390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
96-243
               

               
Cow position:
               
chr4:17851300-17851153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
96-243
               

               
Cow position:
               
chr4:54541686-54541538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
96-244
               

               
Cow position:
               
chr4:60506229-60506373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
97-230
               

               
Cow position:
               
chr4:46136705-46136837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
99-240
               

               
Cow position:
               
chr4:69290789-69290646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
100-221
               

               
Cow position:
               
chr4:21173802-21173923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
100-233
               

               
Cow position:
               
chr4:33433299-33433166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
100-243
               

               
Cow position:
               
chr4:12441852-12441994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
100-243
               

               
Cow position:
               
chr4:13241582-13241724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
101-222
               

               
Cow position:
               
chr4:5577252-5577132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
101-242
               

               
Cow position:
               
chr4:38350243-38350100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
101-243
               

               
Cow position:
               
chr4:49800651-49800790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
5, 75
               

               
Conread position:
               
102-242
               

               
Cow position:
               
chr4:43740493-43740633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
102-256
               

               
Cow position:
               
chr4:5964032-5963877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
60, 133
               

               
Conread position:
               
105-232
               

               
Cow position:
               
chr4:61235240-61235116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
105-243
               

               
Cow position:
               
chr4:19323936-19324074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
106-227
               

               
Cow position:
               
chr4:16543555-16543436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
106-241
               

               
Cow position:
               
chr4:22138259-22138123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
106-243
               

               
Cow position:
               
chr4:59002176-59002040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
106-258
               

               
Cow position:
               
chr4:43542508-43542363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
107-241
               

               
Cow position:
               
chr4:45862381-45862510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
108-243
               

               
Cow position:
               
chr4:16221912-16221777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-229
               

               
Cow position:
               
chr4:34653903-34653783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-235
               

               
Cow position:
               
chr4:48902659-48902534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
109-241
               

               
Cow position:
               
chr4:33181510-33181642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-242
               

               
Cow position:
               
chr4:60141551-60141423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
109-243
               

               
Cow position:
               
chr4:386426-386296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
109-243
               

               
Cow position:
               
chr4:36517513-36517383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
109-243
               

               
Cow position:
               
chr4:44854324-44854191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
109-247
               

               
Cow position:
               
chr4:19118983-19119121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-243
               

               
Cow position:
               
chr4:11194154-11194285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
110-248
               

               
Cow position:
               
chr4:13990988-13990853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
110-257
               

               
Cow position:
               
chr4:18951940-18952087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-258
               

               
Cow position:
               
chr4:15236603-15236743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
111-212
               

               
Cow position:
               
chr4:50687893-50687790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
111-240
               

               
Cow position:
               
chr4:42176506-42176377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
111-241
               

               
Cow position:
               
chr4:10958705-10958839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
111-241
               

               
Cow position:
               
chr4:19542106-19542230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
111-243
               

               
Cow position:
               
chr4:36744548-36744678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
111-245
               

               
Cow position:
               
chr4:47305045-47305179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-241
               

               
Cow position:
               
chr4:45874497-45874368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
124, 111
               

               
Conread position:
               
114-257
               

               
Cow position:
               
chr4:29318105-29317962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
116-238
               

               
Cow position:
               
chr4:46560153-46560277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
119-235
               

               
Cow position:
               
chr4:44786018-44786133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
119-243
               

               
Cow position:
               
chr4:4295562-4295685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
123-243
               

               
Cow position:
               
chr4:26901307-26901427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
126-243
               

               
Cow position:
               
chr4:18099079-18098962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
127-241
               

               
Cow position:
               
chr4:61268175-61268289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
127-243
               

               
Cow position:
               
chr4:60527164-60527280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
129-243
               

               
Cow position:
               
chr4:41907596-41907482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-243
               

               
Cow position:
               
chr4:3519408-3519521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
133-243
               

               
Cow position:
               
chr4:39007497-39007604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
139-243
               

               
Cow position:
               
chr4:33360099-33360204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
143-242
               

               
Cow position:
               
chr4:42374156-42374057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
143-243
               

               
Cow position:
               
chr4:47048118-47048217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
144-235
               

               
Cow position:
               
chr4:23807950-23808040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
145-243
               

               
Cow position:
               
chr4:51083336-51083239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
147-229
               

               
Cow position:
               
chr4:54937084-54937167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
152-252
               

               
Cow position:
               
chr4:50494780-50494880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
154-243
               

               
Cow position:
               
chr4:479781-479692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
164-243
               

               
Cow position:
               
chr4:19580734-19580656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
80
               

               
Alignm identity:
               
73
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               
Show alignments to all cow chromosomes.