Cow genome map
| Conread name: | rcbl0_018126.y1 |
| Conread position: | 1-93 |
| Cow position: | chr5:56433682-56433774 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 78 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-182 |
| Cow position: | chr5:55750374-55750192 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 31, 138 |
| Conread position: | 1-216 |
| Cow position: | chr5:12761238-12761012 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 1-217 |
| Cow position: | chr5:52126653-52126877 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 110 |
| Conread position: | 1-218 |
| Cow position: | chr5:48829036-48829262 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 113 |
| Conread position: | 1-218 |
| Cow position: | chr5:59631363-59631582 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 1-223 |
| Cow position: | chr5:1396494-1396713 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 97, 29 |
| Conread position: | 1-223 |
| Cow position: | chr5:34528439-34528655 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 1-228 |
| Cow position: | chr5:45273623-45273383 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 1-229 |
| Cow position: | chr5:61840064-61840309 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-230 |
| Cow position: | chr5:67212260-67212481 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 95, 36 |
| Conread position: | 1-233 |
| Cow position: | chr5:16938131-16937906 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 1-234 |
| Cow position: | chr5:41129639-41129866 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 1-234 |
| Cow position: | chr5:47547840-47547603 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 203 |
| Conread position: | 1-235 |
| Cow position: | chr5:18574048-18574297 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 45, 67 |
| Conread position: | 1-239 |
| Cow position: | chr5:50533509-50533259 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 94, 180 |
| Conread position: | 1-239 |
| Cow position: | chr5:51935064-51935318 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 31, 205 |
| Conread position: | 1-240 |
| Cow position: | chr5:39875001-39875254 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-240 |
| Cow position: | chr5:42744666-42744909 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 91, 196 |
| Conread position: | 1-240 |
| Cow position: | chr5:53855572-53855836 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-240 |
| Cow position: | chr5:57327674-57327930 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 240 |
| Conread position: | 1-240 |
| Cow position: | chr5:57736988-57737229 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 99, 83 |
| Conread position: | 1-241 |
| Cow position: | chr5:458360-458619 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 34, 210 |
| Conread position: | 1-241 |
| Cow position: | chr5:6528560-6528816 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-241 |
| Cow position: | chr5:7723548-7723796 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 29, 108 |
| Conread position: | 1-241 |
| Cow position: | chr5:20779508-20779267 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 80, 151 |
| Conread position: | 1-241 |
| Cow position: | chr5:27179540-27179787 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 1-241 |
| Cow position: | chr5:29771396-29771659 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-241 |
| Cow position: | chr5:35247232-35246979 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 63 |
| Conread position: | 1-241 |
| Cow position: | chr5:36855082-36855337 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-241 |
| Cow position: | chr5:37377749-37377984 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 150, 8 |
| Conread position: | 1-241 |
| Cow position: | chr5:44028423-44028176 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 59, 181 |
| Conread position: | 1-241 |
| Cow position: | chr5:44752433-44752176 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-241 |
| Cow position: | chr5:51053770-51053518 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 1-241 |
| Cow position: | chr5:52000100-52000349 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 94, 123 |
| Conread position: | 1-241 |
| Cow position: | chr5:54060154-54060407 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 37, 165 |
| Conread position: | 1-241 |
| Cow position: | chr5:54311210-54311467 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-241 |
| Cow position: | chr5:54768032-54767778 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 32, 149 |
| Conread position: | 1-241 |
| Cow position: | chr5:55176768-55177017 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 96, 155 |
| Conread position: | 1-241 |
| Cow position: | chr5:57419915-57419663 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 1-241 |
| Cow position: | chr5:62142548-62142807 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 41, 64 |
| Conread position: | 1-241 |
| Cow position: | chr5:65933052-65932812 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 1-241 |
| Cow position: | chr5:66972305-66972560 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-242 |
| Cow position: | chr5:32339086-32338834 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 102, 244 |
| Conread position: | 1-242 |
| Cow position: | chr5:34300794-34301048 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 97, 181 |
| Conread position: | 1-243 |
| Cow position: | chr5:4710267-4710019 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 177 |
| Conread position: | 1-243 |
| Cow position: | chr5:9894249-9893990 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 1-243 |
| Cow position: | chr5:16025579-16025335 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 161 |
| Conread position: | 1-243 |
| Cow position: | chr5:29903644-29903390 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-243 |
| Cow position: | chr5:39447653-39447399 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1-243 |
| Cow position: | chr5:44054156-44053922 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-243 |
| Cow position: | chr5:45397456-45397702 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 81, 180 |
| Conread position: | 1-243 |
| Cow position: | chr5:50599934-50600181 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 87, 127 |
| Conread position: | 1-243 |
| Cow position: | chr5:52165301-52165046 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 37, 124 |
| Conread position: | 1-243 |
| Cow position: | chr5:55068588-55068839 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 1-243 |
| Cow position: | chr5:63992285-63992039 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-243 |
| Cow position: | chr5:64027130-64026886 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1-244 |
| Cow position: | chr5:35826481-35826735 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 94, 244 |
| Conread position: | 1-245 |
| Cow position: | chr5:72951717-72951979 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-247 |
| Cow position: | chr5:65588581-65588836 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 90, 154 |
| Conread position: | 1-248 |
| Cow position: | chr5:48009971-48009721 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 87, 143 |
| Conread position: | 1-254 |
| Cow position: | chr5:5257414-5257145 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 97, 28 |
| Conread position: | 1-254 |
| Cow position: | chr5:66257517-66257780 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 1-260 |
| Cow position: | chr5:13537030-13537283 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 65 |
| Conread position: | 1-260 |
| Cow position: | chr5:45225947-45225670 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 204 |
| Conread position: | 1-263 |
| Cow position: | chr5:24348985-24349258 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 33, 242 |
| Conread position: | 1-265 |
| Cow position: | chr5:66581841-66582112 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 41, 132 |
| Conread position: | 2-241 |
| Cow position: | chr5:63987572-63987315 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 36, 195 |
| Conread position: | 2-243 |
| Cow position: | chr5:44994159-44993916 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 73, 114 |
| Conread position: | 2-243 |
| Cow position: | chr5:64592213-64591962 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 16 |
| Conread position: | 3-153 |
| Cow position: | chr5:7921520-7921361 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 116 |
| Conread position: | 3-183 |
| Cow position: | chr5:12566848-12566668 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 3-186 |
| Cow position: | chr5:35449133-35449312 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 3-210 |
| Cow position: | chr5:69520773-69520991 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 3-222 |
| Cow position: | chr5:41010113-41009892 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 3-227 |
| Cow position: | chr5:59717628-59717853 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 3-227 |
| Cow position: | chr5:66366398-66366626 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 3-228 |
| Cow position: | chr5:20407787-20407560 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 83, 100 |
| Conread position: | 3-228 |
| Cow position: | chr5:55966999-55966762 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 3-229 |
| Cow position: | chr5:32696940-32696704 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 3-230 |
| Cow position: | chr5:2309680-2309436 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-232 |
| Cow position: | chr5:57101896-57101659 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 22, 177 |
| Conread position: | 3-233 |
| Cow position: | chr5:3582455-3582683 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 103, 20 |
| Conread position: | 3-233 |
| Cow position: | chr5:30844993-30845233 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 81, 180 |
| Conread position: | 3-240 |
| Cow position: | chr5:19813335-19813090 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 3-240 |
| Cow position: | chr5:28927709-28927464 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 91, 163 |
| Conread position: | 3-240 |
| Cow position: | chr5:34624852-34625090 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 60, 35 |
| Conread position: | 3-240 |
| Cow position: | chr5:57935229-57934978 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 3-240 |
| Cow position: | chr5:65776502-65776254 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 3-241 |
| Cow position: | chr5:4218755-4218988 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 3-241 |
| Cow position: | chr5:4220864-4221109 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 94, 150 |
| Conread position: | 3-241 |
| Cow position: | chr5:9090140-9089897 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 91, 221 |
| Conread position: | 3-241 |
| Cow position: | chr5:14550702-14550453 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 3-241 |
| Cow position: | chr5:18289009-18289253 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 35, 157 |
| Conread position: | 3-241 |
| Cow position: | chr5:27154903-27155136 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 55, 31 |
| Conread position: | 3-241 |
| Cow position: | chr5:29827929-29828177 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 228 |
| Conread position: | 3-241 |
| Cow position: | chr5:30276577-30276821 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 3-242 |
| Cow position: | chr5:5111193-5110937 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 3-242 |
| Cow position: | chr5:43457636-43457399 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 3-243 |
| Cow position: | chr5:6286544-6286300 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 3-243 |
| Cow position: | chr5:11229789-11229540 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 92, 159 |
| Conread position: | 3-243 |
| Cow position: | chr5:12557409-12557154 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 95, 15 |
| Conread position: | 3-243 |
| Cow position: | chr5:15363774-15364015 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 70, 111 |
| Conread position: | 3-243 |
| Cow position: | chr5:20783504-20783755 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 82, 157 |
| Conread position: | 3-243 |
| Cow position: | chr5:21617338-21617591 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 3-243 |
| Cow position: | chr5:23168945-23168693 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 65, 122 |
| Conread position: | 3-243 |
| Cow position: | chr5:25035363-25035125 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 144 |
| Conread position: | 3-243 |
| Cow position: | chr5:30950036-30949782 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 3-243 |
| Cow position: | chr5:41452783-41452539 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 5 |
| Conread position: | 3-243 |
| Cow position: | chr5:41546009-41545760 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 3-243 |
| Cow position: | chr5:43929856-43929603 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 92, 23 |
| Conread position: | 3-243 |
| Cow position: | chr5:44726446-44726201 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 3-243 |
| Cow position: | chr5:50943270-50943023 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 79, 53 |
| Conread position: | 3-243 |
| Cow position: | chr5:56014614-56014864 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 3-243 |
| Cow position: | chr5:56028647-56028408 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 150 |
| Conread position: | 3-243 |
| Cow position: | chr5:56317178-56317422 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 92, 54 |
| Conread position: | 3-243 |
| Cow position: | chr5:65967848-65967598 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 3-243 |
| Cow position: | chr5:69461214-69461468 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 73, 216 |
| Conread position: | 3-243 |
| Cow position: | chr5:72045766-72045544 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-243 |
| Cow position: | chr5:74643791-74643545 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 92, 148 |
| Conread position: | 3-244 |
| Cow position: | chr5:21828746-21829001 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 90, 212 |
| Conread position: | 3-244 |
| Cow position: | chr5:25231124-25230885 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 69, 135 |
| Conread position: | 3-244 |
| Cow position: | chr5:56070736-56070993 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 3-244 |
| Cow position: | chr5:58855983-58856236 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 46, 193 |
| Conread position: | 3-250 |
| Cow position: | chr5:8024315-8024061 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 92, 175 |
| Conread position: | 3-252 |
| Cow position: | chr5:37814504-37814768 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 75, 6 |
| Conread position: | 3-252 |
| Cow position: | chr5:64176237-64175984 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 3-255 |
| Cow position: | chr5:17087145-17086876 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 201 |
| Conread position: | 3-255 |
| Cow position: | chr5:46509986-46509718 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 92, 41 |
| Conread position: | 3-255 |
| Cow position: | chr5:57626686-57626933 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 76, 153 |
| Conread position: | 3-256 |
| Cow position: | chr5:33537770-33538021 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 3-256 |
| Cow position: | chr5:56518330-56518074 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 94, 109 |
| Conread position: | 3-257 |
| Cow position: | chr5:24996343-24996078 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 92, 200 |
| Conread position: | 3-258 |
| Cow position: | chr5:42050431-42050699 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 79, 148 |
| Conread position: | 3-258 |
| Cow position: | chr5:58519525-58519272 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 3-260 |
| Cow position: | chr5:50821662-50821932 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 135 |
| Conread position: | 3-261 |
| Cow position: | chr5:6683475-6683217 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 3-268 |
| Cow position: | chr5:57575649-57575933 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 90, 119 |
| Conread position: | 3-283 |
| Cow position: | chr5:40109379-40109666 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 79, 189 |
| Conread position: | 3-291 |
| Cow position: | chr5:46425971-46425676 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 78, 237 |
| Conread position: | 4-173 |
| Cow position: | chr5:32378740-32378909 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 91, 34 |
| Conread position: | 4-204 |
| Cow position: | chr5:33552532-33552329 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 4-209 |
| Cow position: | chr5:23140697-23140490 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 122 |
| Conread position: | 4-218 |
| Cow position: | chr5:31918532-31918750 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 4-221 |
| Cow position: | chr5:31481027-31481259 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 4-221 |
| Cow position: | chr5:47317090-47316863 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 4-225 |
| Cow position: | chr5:43738072-43737848 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 91, 22 |
| Conread position: | 4-231 |
| Cow position: | chr5:35145230-35145449 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 164, 88 |
| Conread position: | 4-233 |
| Cow position: | chr5:71454714-71454489 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 52 |
| Conread position: | 4-241 |
| Cow position: | chr5:3771722-3771977 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 156 |
| Conread position: | 4-241 |
| Cow position: | chr5:4280342-4280579 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 38, 44 |
| Conread position: | 4-241 |
| Cow position: | chr5:26477131-26476887 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 74, 145 |
| Conread position: | 4-241 |
| Cow position: | chr5:35969423-35969663 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 53 |
| Conread position: | 4-241 |
| Cow position: | chr5:41713183-41713430 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 52, 154 |
| Conread position: | 4-241 |
| Cow position: | chr5:41981277-41981499 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 4-241 |
| Cow position: | chr5:44796849-44796602 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 4-241 |
| Cow position: | chr5:47696561-47696319 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 95, 154 |
| Conread position: | 4-241 |
| Cow position: | chr5:60715479-60715237 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 139 |
| Conread position: | 4-241 |
| Cow position: | chr5:72006973-72006734 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 91, 177 |
| Conread position: | 4-243 |
| Cow position: | chr5:6045172-6045429 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 4-243 |
| Cow position: | chr5:7193312-7193549 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 82, 36 |
| Conread position: | 4-243 |
| Cow position: | chr5:38833004-38833254 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 74, 160 |
| Conread position: | 4-243 |
| Cow position: | chr5:41164969-41165221 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 16 |
| Conread position: | 4-243 |
| Cow position: | chr5:44848145-44847888 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 4-243 |
| Cow position: | chr5:47601700-47601945 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 4-243 |
| Cow position: | chr5:67932583-67932339 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 4-244 |
| Cow position: | chr5:20127937-20128186 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 4-252 |
| Cow position: | chr5:53835595-53835857 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 78, 31 |
| Conread position: | 4-257 |
| Cow position: | chr5:35684819-35685080 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 55, 184 |
| Conread position: | 4-260 |
| Cow position: | chr5:14314406-14314678 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 4-265 |
| Cow position: | chr5:7057525-7057253 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 28, 206 |
| Conread position: | 4-266 |
| Cow position: | chr5:72564641-72564916 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 34, 254 |
| Conread position: | 5-208 |
| Cow position: | chr5:16508977-16509204 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 5-211 |
| Cow position: | chr5:65601342-65601558 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 5-219 |
| Cow position: | chr5:21525050-21525269 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 117 |
| Conread position: | 5-223 |
| Cow position: | chr5:63964287-63964052 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 5-228 |
| Cow position: | chr5:52645197-52644962 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 5-233 |
| Cow position: | chr5:27419840-27419606 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 94, 46 |
| Conread position: | 5-233 |
| Cow position: | chr5:62172298-62172535 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 90, 63 |
| Conread position: | 5-240 |
| Cow position: | chr5:12322919-12322677 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 174 |
| Conread position: | 5-240 |
| Cow position: | chr5:16893890-16893642 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 52 |
| Conread position: | 5-241 |
| Cow position: | chr5:37808794-37808532 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 5-243 |
| Cow position: | chr5:16206273-16206022 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 93, 157 |
| Conread position: | 5-243 |
| Cow position: | chr5:19278818-19278574 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 90, 137 |
| Conread position: | 5-243 |
| Cow position: | chr5:44446986-44446732 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 5-243 |
| Cow position: | chr5:46512881-46512636 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 90, 196 |
| Conread position: | 5-243 |
| Cow position: | chr5:65941368-65941118 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 88, 241 |
| Conread position: | 5-243 |
| Cow position: | chr5:70951994-70951756 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 88, 174 |
| Conread position: | 5-252 |
| Cow position: | chr5:64139448-64139702 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 5-263 |
| Cow position: | chr5:56524057-56524326 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 77, 250 |
| Conread position: | 6-169 |
| Cow position: | chr5:23866280-23866112 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 71 |
| Conread position: | 6-221 |
| Cow position: | chr5:33560851-33560623 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 6-242 |
| Cow position: | chr5:12673579-12673346 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 76, 147 |
| Conread position: | 6-243 |
| Cow position: | chr5:69337712-69337953 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 6-244 |
| Cow position: | chr5:12351905-12351675 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 6-244 |
| Cow position: | chr5:22666976-22667205 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 6-294 |
| Cow position: | chr5:67243812-67244104 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 79, 60 |
| Conread position: | 7-195 |
| Cow position: | chr5:46122466-46122268 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 88, 125 |
| Conread position: | 7-239 |
| Cow position: | chr5:55955793-55956042 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 88, 23 |
| Conread position: | 7-243 |
| Cow position: | chr5:57074450-57074198 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 8-242 |
| Cow position: | chr5:27172095-27171861 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 88, 22 |
| Conread position: | 8-263 |
| Cow position: | chr5:15722181-15721922 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 88, 241 |
| Conread position: | 9-213 |
| Cow position: | chr5:40039884-40039663 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 9-223 |
| Cow position: | chr5:35763161-35763375 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 87, 151 |
| Conread position: | 9-231 |
| Cow position: | chr5:11668300-11668064 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 9-241 |
| Cow position: | chr5:21040090-21039852 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 171 |
| Conread position: | 9-241 |
| Cow position: | chr5:26262786-26262548 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 9-241 |
| Cow position: | chr5:29353242-29352996 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 75, 232 |
| Conread position: | 9-243 |
| Cow position: | chr5:25495465-25495225 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 9-253 |
| Cow position: | chr5:56467583-56467832 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 29, 198 |
| Conread position: | 9-255 |
| Cow position: | chr5:49474659-49474402 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 240 |
| Conread position: | 9-260 |
| Cow position: | chr5:15598347-15598087 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 201 |
| Conread position: | 10-254 |
| Cow position: | chr5:47681115-47680877 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 35 |
| Conread position: | 10-257 |
| Cow position: | chr5:60599298-60599060 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 11-242 |
| Cow position: | chr5:42670968-42670732 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 11-243 |
| Cow position: | chr5:7697893-7698133 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 84, 199 |
| Conread position: | 11-244 |
| Cow position: | chr5:60016055-60016299 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 173 |
| Conread position: | 13-231 |
| Cow position: | chr5:58793724-58793486 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 13-241 |
| Cow position: | chr5:23678814-23678572 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 25, 175 |
| Conread position: | 13-243 |
| Cow position: | chr5:60183691-60183938 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 16-258 |
| Cow position: | chr5:36868632-36868879 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 19-243 |
| Cow position: | chr5:36039108-36038868 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 53 |
| Conread position: | 19-254 |
| Cow position: | chr5:27411498-27411260 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 20-241 |
| Cow position: | chr5:35785079-35784858 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 20-244 |
| Cow position: | chr5:35229232-35229010 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 18 |
| Conread position: | 20-258 |
| Cow position: | chr5:14921033-14920783 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 68, 124 |
| Conread position: | 21-235 |
| Cow position: | chr5:64523969-64523739 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 72, 226 |
| Conread position: | 23-243 |
| Cow position: | chr5:69731407-69731633 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 59, 128 |
| Conread position: | 24-241 |
| Cow position: | chr5:55019194-55019423 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 25-243 |
| Cow position: | chr5:62378693-62378913 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 31-243 |
| Cow position: | chr5:35976429-35976643 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 66, 153 |
| Conread position: | 33-241 |
| Cow position: | chr5:45420228-45420006 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 33-244 |
| Cow position: | chr5:16939676-16939460 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 13, 111 |
| Conread position: | 37-255 |
| Cow position: | chr5:14904152-14903923 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 38-258 |
| Cow position: | chr5:47323380-47323606 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 119 |
| Conread position: | 45-243 |
| Cow position: | chr5:69636157-69636357 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 50-241 |
| Cow position: | chr5:30805095-30805295 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 55-221 |
| Cow position: | chr5:57561466-57561634 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 59-244 |
| Cow position: | chr5:58555090-58555271 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 62-240 |
| Cow position: | chr5:15479077-15479255 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 11, 158 |
| Conread position: | 64-242 |
| Cow position: | chr5:63627584-63627403 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 74-246 |
| Cow position: | chr5:1461053-1461225 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 75-237 |
| Cow position: | chr5:49685303-49685148 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 75-241 |
| Cow position: | chr5:33273657-33273824 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 107 |
| Conread position: | 75-241 |
| Cow position: | chr5:42064170-42064336 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 75-241 |
| Cow position: | chr5:49501858-49501693 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 75-241 |
| Cow position: | chr5:50575752-50575914 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 75-241 |
| Cow position: | chr5:63234859-63234698 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 75-241 |
| Cow position: | chr5:64758804-64758636 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 75-242 |
| Cow position: | chr5:40237180-40237343 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 76-243 |
| Cow position: | chr5:50824561-50824725 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 76-244 |
| Cow position: | chr5:46541088-46540922 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 82-223 |
| Cow position: | chr5:46672179-46672318 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 82-246 |
| Cow position: | chr5:50101404-50101241 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 94, 143 |
| Conread position: | 89-241 |
| Cow position: | chr5:55795985-55795835 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 86, 15 |
| Conread position: | 90-229 |
| Cow position: | chr5:62415982-62415842 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 90-235 |
| Cow position: | chr5:11769251-11769393 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 90-240 |
| Cow position: | chr5:45574383-45574235 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 130 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 90-241 |
| Cow position: | chr5:19752287-19752433 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 90-241 |
| Cow position: | chr5:42845615-42845460 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 134 |
| Conread position: | 90-241 |
| Cow position: | chr5:57230358-57230207 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 90-242 |
| Cow position: | chr5:26549160-26549008 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 90-242 |
| Cow position: | chr5:61875524-61875669 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 90-243 |
| Cow position: | chr5:45187138-45186987 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 121 |
| Conread position: | 90-243 |
| Cow position: | chr5:49342069-49341916 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 90-243 |
| Cow position: | chr5:56334526-56334379 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 90-243 |
| Cow position: | chr5:56517084-56517237 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 70, 88 |
| Conread position: | 90-243 |
| Cow position: | chr5:57686759-57686604 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 90-243 |
| Cow position: | chr5:66551917-66551763 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 90-243 |
| Cow position: | chr5:67118400-67118553 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 90-244 |
| Cow position: | chr5:59626992-59626838 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 134 |
| Conread position: | 90-254 |
| Cow position: | chr5:72006511-72006346 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 90-255 |
| Cow position: | chr5:56211882-56212052 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 79 |
| Conread position: | 91-240 |
| Cow position: | chr5:61455829-61455974 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 91-241 |
| Cow position: | chr5:54350380-54350230 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-243 |
| Cow position: | chr5:68537685-68537535 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 12, 79 |
| Conread position: | 91-244 |
| Cow position: | chr5:60188973-60189127 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 92-243 |
| Cow position: | chr5:17602218-17602072 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 92-247 |
| Cow position: | chr5:63150185-63150032 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 93-243 |
| Cow position: | chr5:76366311-76366162 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 94-241 |
| Cow position: | chr5:48867478-48867333 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 96-243 |
| Cow position: | chr5:17104839-17104983 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 97-200 |
| Cow position: | chr5:32961528-32961424 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 97-243 |
| Cow position: | chr5:69383243-69383387 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 97-256 |
| Cow position: | chr5:52108283-52108123 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 119 |
| Conread position: | 98-241 |
| Cow position: | chr5:2827360-2827504 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 80 |
| Conread position: | 99-233 |
| Cow position: | chr5:24069380-24069513 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 101-241 |
| Cow position: | chr5:9369279-9369140 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 101-258 |
| Cow position: | chr5:43402896-43403051 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 104-243 |
| Cow position: | chr5:35982744-35982604 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 105-242 |
| Cow position: | chr5:15426534-15426670 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 106-223 |
| Cow position: | chr5:57062533-57062416 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-229 |
| Cow position: | chr5:24946236-24946360 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 106-245 |
| Cow position: | chr5:60515032-60514894 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 106-257 |
| Cow position: | chr5:30561928-30562075 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 107-240 |
| Cow position: | chr5:26253176-26253043 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-233 |
| Cow position: | chr5:23527632-23527507 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 109-233 |
| Cow position: | chr5:56613565-56613441 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-234 |
| Cow position: | chr5:55350913-55350786 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 109-240 |
| Cow position: | chr5:6520010-6520142 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 115 |
| Conread position: | 109-241 |
| Cow position: | chr5:2469208-2469081 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 109-241 |
| Cow position: | chr5:39937115-39937246 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 109-243 |
| Cow position: | chr5:12434541-12434676 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 109-243 |
| Cow position: | chr5:27293885-27293751 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-243 |
| Cow position: | chr5:34915054-34914920 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-249 |
| Cow position: | chr5:20595464-20595602 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 110-211 |
| Cow position: | chr5:14742214-14742315 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-241 |
| Cow position: | chr5:44163369-44163237 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 50, 130 |
| Conread position: | 111-233 |
| Cow position: | chr5:9170580-9170460 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 111-254 |
| Cow position: | chr5:45126652-45126795 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 118, 133 |
| Conread position: | 111-256 |
| Cow position: | chr5:5760312-5760172 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 112-232 |
| Cow position: | chr5:22445912-22446033 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 89, 55 |
| Conread position: | 112-241 |
| Cow position: | chr5:59627102-59627231 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-252 |
| Cow position: | chr5:11562721-11562583 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 114-240 |
| Cow position: | chr5:51490241-51490118 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 117-243 |
| Cow position: | chr5:60948140-60948265 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 119-241 |
| Cow position: | chr5:2240980-2240860 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 119-241 |
| Cow position: | chr5:24136724-24136845 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 119-243 |
| Cow position: | chr5:33155826-33155947 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 120-255 |
| Cow position: | chr5:75228189-75228053 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 123-238 |
| Cow position: | chr5:12169755-12169641 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 123-243 |
| Cow position: | chr5:35647356-35647476 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 123-243 |
| Cow position: | chr5:55942366-55942246 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-243 |
| Cow position: | chr5:5847829-5847713 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 126-243 |
| Cow position: | chr5:26167437-26167554 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-245 |
| Cow position: | chr5:26147607-26147726 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 130-267 |
| Cow position: | chr5:54375482-54375344 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 136-241 |
| Cow position: | chr5:34288224-34288122 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 138-235 |
| Cow position: | chr5:38382771-38382674 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-252 |
| Cow position: | chr5:6086315-6086200 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 140-242 |
| Cow position: | chr5:54099251-54099353 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 143-257 |
| Cow position: | chr5:46421619-46421731 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 148-257 |
| Cow position: | chr5:8736241-8736132 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 96, 38 |
| Conread position: | 149-243 |
| Cow position: | chr5:1946870-1946964 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 83 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 152-243 |
| Cow position: | chr5:35394391-35394300 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 162-240 |
| Cow position: | chr5:37253481-37253559 (view UCSC Genome Browser custom track) |
| Alignm length: | 79 |
| Alignm identity: | 71 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 162-243 |
| Cow position: | chr5:34918398-34918479 (view UCSC Genome Browser custom track) |
| Alignm length: | 82 |
| Alignm identity: | 73 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-243 |
| Cow position: | chr5:49207272-49207194 (view UCSC Genome Browser custom track) |
| Alignm length: | 79 |
| Alignm identity: | 71 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.