Non-Coding RNA Search

Cow genome map


           Conread name:
           rcbl0_019670.y1
        

               Conread position:
               1-135
               

               Cow position:
               chr1:73536589-73536725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 133
               

               Conread position:
               1-170
               

               Cow position:
               chr1:85826198-85826366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               124, 41
               

               Conread position:
               1-173
               

               Cow position:
               chr1:50679432-50679257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 111
               

               Conread position:
               1-176
               

               Cow position:
               chr1:11873505-11873336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr1:51684655-51684838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1-191
               

               Cow position:
               chr1:77502934-77502745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               8, 129
               

               Conread position:
               1-209
               

               Cow position:
               chr1:83082856-83083066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 131
               

               Conread position:
               1-212
               

               Cow position:
               chr1:26729579-26729779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1-214
               

               Cow position:
               chr1:57639669-57639452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               42, 139
               

               Conread position:
               1-216
               

               Cow position:
               chr1:65905153-65904933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               1-216
               

               Cow position:
               chr1:79590958-79591163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               7, 122
               

               Conread position:
               1-220
               

               Cow position:
               chr1:31765539-31765303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               1-220
               

               Cow position:
               chr1:52753312-52753090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               7, 89
               

               Conread position:
               1-221
               

               Cow position:
               chr1:63138692-63138911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 120
               

               Conread position:
               1-221
               

               Cow position:
               chr1:63596202-63595984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               1-221
               

               Cow position:
               chr1:90864442-90864223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               7, 114
               

               Conread position:
               1-221
               

               Cow position:
               chr1:91816916-91816701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               7, 61
               

               Conread position:
               1-224
               

               Cow position:
               chr1:44769260-44769036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               9, 43
               

               Conread position:
               1-224
               

               Cow position:
               chr1:102647419-102647200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               7, 110
               

               Conread position:
               1-244
               

               Cow position:
               chr1:85596791-85597027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               9, 136
               

               Conread position:
               1-258
               

               Cow position:
               chr1:24542727-24542467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               115, 43
               

               Conread position:
               1-262
               

               Cow position:
               chr1:101867207-101867456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               116, 42
               

               Conread position:
               1-263
               

               Cow position:
               chr1:64251197-64250945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               111, 35
               

               Conread position:
               1-264
               

               Cow position:
               chr1:81228485-81228225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 79
               

               Conread position:
               1-269
               

               Cow position:
               chr1:37309663-37309404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               1-270
               

               Cow position:
               chr1:30047739-30047487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               263, 44
               

               Conread position:
               1-282
               

               Cow position:
               chr1:56229106-56229367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               255, 41
               

               Conread position:
               1-283
               

               Cow position:
               chr1:94261397-94261664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-284
               

               Cow position:
               chr1:56477440-56477722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               1-285
               

               Cow position:
               chr1:94226696-94226424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               257, 42
               

               Conread position:
               1-287
               

               Cow position:
               chr1:91875054-91874784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               1-288
               

               Cow position:
               chr1:7739812-7740081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               1-288
               

               Cow position:
               chr1:42887411-42887143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               1-288
               

               Cow position:
               chr1:64302392-64302110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               263, 10
               

               Conread position:
               1-288
               

               Cow position:
               chr1:102349900-102349618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               116, 192
               

               Conread position:
               1-290
               

               Cow position:
               chr1:10942240-10941959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               35, 66
               

               Conread position:
               1-290
               

               Cow position:
               chr1:10964146-10964427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               35, 66
               

               Conread position:
               1-290
               

               Cow position:
               chr1:31934366-31934643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               262, 115
               

               Conread position:
               1-291
               

               Cow position:
               chr1:10778419-10778700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               12, 36
               

               Conread position:
               1-291
               

               Cow position:
               chr1:66898643-66898360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               98, 87
               

               Conread position:
               1-292
               

               Cow position:
               chr1:43389200-43388914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               1-292
               

               Cow position:
               chr1:89448752-89449039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               126, 35
               

               Conread position:
               1-292
               

               Cow position:
               chr1:102756574-102756295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               255, 13
               

               Conread position:
               1-293
               

               Cow position:
               chr1:81290362-81290644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               145, 42
               

               Conread position:
               1-294
               

               Cow position:
               chr1:51394276-51394557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               1-294
               

               Cow position:
               chr1:53622814-53623092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1-295
               

               Cow position:
               chr1:76019843-76019557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               1-296
               

               Cow position:
               chr1:484614-484324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               1-296
               

               Cow position:
               chr1:1877883-1878162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               52, 70
               

               Conread position:
               1-296
               

               Cow position:
               chr1:22836250-22836543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               1-296
               

               Cow position:
               chr1:34856782-34856486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               33, 135
               

               Conread position:
               1-296
               

               Cow position:
               chr1:48444339-48444052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 33
               

               Conread position:
               1-296
               

               Cow position:
               chr1:53369061-53369344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               259, 12
               

               Conread position:
               1-298
               

               Cow position:
               chr1:7442836-7443121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               1-304
               

               Cow position:
               chr1:5579907-5580205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               1-304
               

               Cow position:
               chr1:31608042-31607739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 159
               

               Conread position:
               1-304
               

               Cow position:
               chr1:89076785-89076482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 121
               

               Conread position:
               1-306
               

               Cow position:
               chr1:79844320-79844617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               1-328
               

               Cow position:
               chr1:21460719-21461043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               49, 160
               

               Conread position:
               1-330
               

               Cow position:
               chr1:77880883-77880559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               1-341
               

               Cow position:
               chr1:42545932-42545587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 226
               

               Conread position:
               2-158
               

               Cow position:
               chr1:4293911-4294064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               2-171
               

               Cow position:
               chr1:29901118-29900945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               2-174
               

               Cow position:
               chr1:71818603-71818439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               2-179
               

               Cow position:
               chr1:5873117-5872939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 111
               

               Conread position:
               2-190
               

               Cow position:
               chr1:22448731-22448542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               120, 40
               

               Conread position:
               2-200
               

               Cow position:
               chr1:70028437-70028629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               2-213
               

               Cow position:
               chr1:57396078-57395874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               8, 111
               

               Conread position:
               2-220
               

               Cow position:
               chr1:63390918-63390697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               39, 109
               

               Conread position:
               2-246
               

               Cow position:
               chr1:70026489-70026254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               2-262
               

               Cow position:
               chr1:6166097-6166347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               2-264
               

               Cow position:
               chr1:74956166-74955912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               2-268
               

               Cow position:
               chr1:42555120-42555377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               112, 7
               

               Conread position:
               2-270
               

               Cow position:
               chr1:72286205-72285952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               2-270
               

               Cow position:
               chr1:96472299-96472546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               11, 42
               

               Conread position:
               2-276
               

               Cow position:
               chr1:53425028-53425300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 131
               

               Conread position:
               2-279
               

               Cow position:
               chr1:20000896-20000623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               209
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               2-281
               

               Cow position:
               chr1:95176795-95177064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               262, 40
               

               Conread position:
               2-283
               

               Cow position:
               chr1:99609223-99609497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               102, 131
               

               Conread position:
               2-285
               

               Cow position:
               chr1:82936730-82936466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               260, 40
               

               Conread position:
               2-288
               

               Cow position:
               chr1:98030773-98031056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               2-290
               

               Cow position:
               chr1:22525734-22526013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 27
               

               Conread position:
               2-290
               

               Cow position:
               chr1:29935523-29935252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 39
               

               Conread position:
               2-290
               

               Cow position:
               chr1:84812077-84811802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               124, 34
               

               Conread position:
               2-290
               

               Cow position:
               chr1:93499482-93499756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               186, 41
               

               Conread position:
               2-293
               

               Cow position:
               chr1:88913174-88913458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 42
               

               Conread position:
               2-294
               

               Cow position:
               chr1:17196773-17196486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               138, 23
               

               Conread position:
               2-294
               

               Cow position:
               chr1:51417627-51417909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               2-295
               

               Cow position:
               chr1:100800214-100800493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               181, 14
               

               Conread position:
               2-296
               

               Cow position:
               chr1:3323717-3324013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               33, 82
               

               Conread position:
               2-296
               

               Cow position:
               chr1:48580984-48581269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               11, 112
               

               Conread position:
               2-296
               

               Cow position:
               chr1:49433406-49433122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               2-296
               

               Cow position:
               chr1:87072553-87072837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               2-298
               

               Cow position:
               chr1:92997043-92996747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 92
               

               Conread position:
               2-311
               

               Cow position:
               chr1:24778129-24777838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 28
               

               Conread position:
               2-314
               

               Cow position:
               chr1:53671883-53671590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               126, 38
               

               Conread position:
               2-329
               

               Cow position:
               chr1:67305385-67305067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 41
               

               Conread position:
               2-334
               

               Cow position:
               chr1:20950577-20950892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               254, 43
               

               Conread position:
               3-210
               

               Cow position:
               chr1:93228382-93228584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               3-330
               

               Cow position:
               chr1:3790209-3789893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               294, 43
               

               Conread position:
               4-211
               

               Cow position:
               chr1:70428571-70428797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               4-221
               

               Cow position:
               chr1:20002383-20002162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               86, 188
               

               Conread position:
               4-260
               

               Cow position:
               chr1:86279267-86279518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               4-261
               

               Cow position:
               chr1:89485429-89485686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               15, 133
               

               Conread position:
               6-180
               

               Cow position:
               chr1:6961767-6961937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 105
               

               Conread position:
               6-194
               

               Cow position:
               chr1:57635320-57635505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               6-221
               

               Cow position:
               chr1:71257617-71257396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               111, 9
               

               Conread position:
               6-264
               

               Cow position:
               chr1:89230368-89230122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               136, 36
               

               Conread position:
               6-270
               

               Cow position:
               chr1:100705989-100706242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               30, 117
               

               Conread position:
               6-291
               

               Cow position:
               chr1:4701813-4701536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               157, 116
               

               Conread position:
               6-292
               

               Cow position:
               chr1:16767221-16766949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               250, 35
               

               Conread position:
               6-317
               

               Cow position:
               chr1:57297333-57297654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               7-121
               

               Cow position:
               chr1:52506692-52506581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               7-130
               

               Cow position:
               chr1:49839368-49839488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               7-169
               

               Cow position:
               chr1:1802000-1802159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               7-171
               

               Cow position:
               chr1:24655822-24655978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 92
               

               Conread position:
               7-171
               

               Cow position:
               chr1:56674266-56674106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               7-173
               

               Cow position:
               chr1:12988906-12989074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               7-173
               

               Cow position:
               chr1:33811790-33811952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-173
               

               Cow position:
               chr1:38544600-38544442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               7-173
               

               Cow position:
               chr1:78794875-78794714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               7-173
               

               Cow position:
               chr1:81638263-81638427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 74
               

               Conread position:
               7-175
               

               Cow position:
               chr1:83593944-83593784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               33, 104
               

               Conread position:
               7-177
               

               Cow position:
               chr1:78783407-78783574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               7-180
               

               Cow position:
               chr1:11770430-11770263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               7-182
               

               Cow position:
               chr1:82504834-82505007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               83, 125
               

               Conread position:
               7-191
               

               Cow position:
               chr1:73561789-73561607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               7-194
               

               Cow position:
               chr1:31235067-31234888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               7-194
               

               Cow position:
               chr1:48696904-48696728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               7-200
               

               Cow position:
               chr1:45535566-45535756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               7-200
               

               Cow position:
               chr1:80631561-80631748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               39, 72
               

               Conread position:
               7-207
               

               Cow position:
               chr1:82443596-82443399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               96, 89
               

               Conread position:
               7-207
               

               Cow position:
               chr1:99136570-99136374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               123, 35
               

               Conread position:
               7-209
               

               Cow position:
               chr1:60032738-60032541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               7-209
               

               Cow position:
               chr1:61564657-61564851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               7-210
               

               Cow position:
               chr1:43340758-43340558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               7-213
               

               Cow position:
               chr1:24235656-24235457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-214
               

               Cow position:
               chr1:54199523-54199316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 127
               

               Conread position:
               7-218
               

               Cow position:
               chr1:55135694-55135903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               177, 35
               

               Conread position:
               7-218
               

               Cow position:
               chr1:83410304-83410512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               7-220
               

               Cow position:
               chr1:57880928-57880714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 124
               

               Conread position:
               7-220
               

               Cow position:
               chr1:72103707-72103920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               34, 104
               

               Conread position:
               7-220
               

               Cow position:
               chr1:87440329-87440537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               7-221
               

               Cow position:
               chr1:70094202-70094410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               7-221
               

               Cow position:
               chr1:101551322-101551533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               7-224
               

               Cow position:
               chr1:51654271-51654497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               7-240
               

               Cow position:
               chr1:98310926-98311157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               24, 100
               

               Conread position:
               7-252
               

               Cow position:
               chr1:90640889-90641125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 184
               

               Conread position:
               7-259
               

               Cow position:
               chr1:49317636-49317392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               7-262
               

               Cow position:
               chr1:88652491-88652743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               152, 29
               

               Conread position:
               7-263
               

               Cow position:
               chr1:4414347-4414101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               133, 36
               

               Conread position:
               7-264
               

               Cow position:
               chr1:68845625-68845380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               7-265
               

               Cow position:
               chr1:19482214-19481971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-265
               

               Cow position:
               chr1:40599904-40600151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               116, 39
               

               Conread position:
               7-265
               

               Cow position:
               chr1:64678562-64678805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               7-266
               

               Cow position:
               chr1:20204888-20205138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               127, 91
               

               Conread position:
               7-268
               

               Cow position:
               chr1:41056544-41056792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               257, 28
               

               Conread position:
               7-269
               

               Cow position:
               chr1:95215321-95215075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               257, 108
               

               Conread position:
               7-270
               

               Cow position:
               chr1:53495328-53495577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               230, 96
               

               Conread position:
               7-270
               

               Cow position:
               chr1:69539558-69539807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-275
               

               Cow position:
               chr1:61391928-61391670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               108, 36
               

               Conread position:
               7-279
               

               Cow position:
               chr1:41252537-41252285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               163, 32
               

               Conread position:
               7-280
               

               Cow position:
               chr1:92963259-92963516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               127, 42
               

               Conread position:
               7-281
               

               Cow position:
               chr1:14206295-14206027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 63
               

               Conread position:
               7-282
               

               Cow position:
               chr1:39418261-39417987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 222
               

               Conread position:
               7-283
               

               Cow position:
               chr1:5135833-5135580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-283
               

               Cow position:
               chr1:85647921-85647653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-285
               

               Cow position:
               chr1:3923934-3923669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-285
               

               Cow position:
               chr1:4291019-4291295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 188
               

               Conread position:
               7-285
               

               Cow position:
               chr1:28176864-28177135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               37, 130
               

               Conread position:
               7-285
               

               Cow position:
               chr1:73960566-73960831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-285
               

               Cow position:
               chr1:97696601-97696875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 186
               

               Conread position:
               7-285
               

               Cow position:
               chr1:101632478-101632207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-286
               

               Cow position:
               chr1:8129106-8128839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               133, 37
               

               Conread position:
               7-286
               

               Cow position:
               chr1:38753778-38754056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               29, 126
               

               Conread position:
               7-286
               

               Cow position:
               chr1:93528555-93528833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 106
               

               Conread position:
               7-287
               

               Cow position:
               chr1:6305004-6304740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               30, 126
               

               Conread position:
               7-287
               

               Cow position:
               chr1:25281815-25281524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               7-287
               

               Cow position:
               chr1:37322141-37321869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               112, 37
               

               Conread position:
               7-287
               

               Cow position:
               chr1:68619073-68618800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               40, 35
               

               Conread position:
               7-288
               

               Cow position:
               chr1:3137788-3138047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               34, 110
               

               Conread position:
               7-288
               

               Cow position:
               chr1:35162268-35162545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 117
               

               Conread position:
               7-288
               

               Cow position:
               chr1:36998053-36998319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 85
               

               Conread position:
               7-288
               

               Cow position:
               chr1:52039497-52039770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               133, 36
               

               Conread position:
               7-288
               

               Cow position:
               chr1:71227941-71228228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               31, 197
               

               Conread position:
               7-288
               

               Cow position:
               chr1:91066292-91066018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-289
               

               Cow position:
               chr1:84255619-84255902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 106
               

               Conread position:
               7-290
               

               Cow position:
               chr1:24534393-24534122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-290
               

               Cow position:
               chr1:53520768-53521051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 125
               

               Conread position:
               7-290
               

               Cow position:
               chr1:59518781-59519050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-290
               

               Cow position:
               chr1:74927741-74928020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               7-291
               

               Cow position:
               chr1:34159695-34159974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 98
               

               Conread position:
               7-292
               

               Cow position:
               chr1:12464805-12464527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               257, 37
               

               Conread position:
               7-292
               

               Cow position:
               chr1:15333742-15334027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               7-292
               

               Cow position:
               chr1:22192624-22192908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               96, 214
               

               Conread position:
               7-292
               

               Cow position:
               chr1:41696919-41697192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               257, 39
               

               Conread position:
               7-292
               

               Cow position:
               chr1:50931115-50930841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-292
               

               Cow position:
               chr1:55705389-55705105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               133, 39
               

               Conread position:
               7-292
               

               Cow position:
               chr1:81569170-81568890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               138, 35
               

               Conread position:
               7-292
               

               Cow position:
               chr1:101866636-101866360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               257, 45
               

               Conread position:
               7-293
               

               Cow position:
               chr1:51445740-51446025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 82
               

               Conread position:
               7-293
               

               Cow position:
               chr1:98461155-98461421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               7-294
               

               Cow position:
               chr1:874507-874794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               7-294
               

               Cow position:
               chr1:4032486-4032772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 213
               

               Conread position:
               7-294
               

               Cow position:
               chr1:25383523-25383808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               7-294
               

               Cow position:
               chr1:47886628-47886341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               33, 128
               

               Conread position:
               7-294
               

               Cow position:
               chr1:54156877-54156595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               7-294
               

               Cow position:
               chr1:75744721-75745002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               110, 36
               

               Conread position:
               7-294
               

               Cow position:
               chr1:77683218-77683487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               7-294
               

               Cow position:
               chr1:93554704-93554976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 63
               

               Conread position:
               7-295
               

               Cow position:
               chr1:20667881-20667602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-295
               

               Cow position:
               chr1:53374292-53374568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 15
               

               Conread position:
               7-295
               

               Cow position:
               chr1:71119373-71119659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 59
               

               Conread position:
               7-295
               

               Cow position:
               chr1:96964181-96964457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               255, 23
               

               Conread position:
               7-296
               

               Cow position:
               chr1:197143-196867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-296
               

               Cow position:
               chr1:2976134-2975850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               7-296
               

               Cow position:
               chr1:11853825-11853546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               255, 109
               

               Conread position:
               7-296
               

               Cow position:
               chr1:11914017-11913735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               127, 72
               

               Conread position:
               7-296
               

               Cow position:
               chr1:18936969-18936696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               7-296
               

               Cow position:
               chr1:21955512-21955233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               7-296
               

               Cow position:
               chr1:25734719-25735010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               29, 112
               

               Conread position:
               7-296
               

               Cow position:
               chr1:31348580-31348296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               255, 103
               

               Conread position:
               7-296
               

               Cow position:
               chr1:43352796-43352514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               7-296
               

               Cow position:
               chr1:55429095-55428814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 42
               

               Conread position:
               7-296
               

               Cow position:
               chr1:65318436-65318716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 65
               

               Conread position:
               7-296
               

               Cow position:
               chr1:74084336-74084049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               36, 41
               

               Conread position:
               7-296
               

               Cow position:
               chr1:86110870-86110603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               251, 35
               

               Conread position:
               7-296
               

               Cow position:
               chr1:86113550-86113257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               31, 44
               

               Conread position:
               7-296
               

               Cow position:
               chr1:87095370-87095072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 228
               

               Conread position:
               7-297
               

               Cow position:
               chr1:53308528-53308251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               7-297
               

               Cow position:
               chr1:79165225-79164940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 124
               

               Conread position:
               7-298
               

               Cow position:
               chr1:33207010-33206735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 27
               

               Conread position:
               7-298
               

               Cow position:
               chr1:53458557-53458839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-298
               

               Cow position:
               chr1:61742107-61741824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               198, 29
               

               Conread position:
               7-298
               

               Cow position:
               chr1:64804243-64803958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               36, 90
               

               Conread position:
               7-299
               

               Cow position:
               chr1:12222744-12222462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               256, 103
               

               Conread position:
               7-300
               

               Cow position:
               chr1:28563708-28563422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 73
               

               Conread position:
               7-300
               

               Cow position:
               chr1:44506828-44507107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 217
               

               Conread position:
               7-300
               

               Cow position:
               chr1:63434945-63434661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               7-304
               

               Cow position:
               chr1:43872470-43872170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 35
               

               Conread position:
               7-304
               

               Cow position:
               chr1:90976226-90975937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 110
               

               Conread position:
               7-304
               

               Cow position:
               chr1:101822643-101822365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               30, 85
               

               Conread position:
               7-305
               

               Cow position:
               chr1:74822316-74822600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-307
               

               Cow position:
               chr1:34771643-34771350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 35
               

               Conread position:
               7-308
               

               Cow position:
               chr1:16962149-16961855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               74, 70
               

               Conread position:
               7-308
               

               Cow position:
               chr1:81913287-81913001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-312
               

               Cow position:
               chr1:55229845-55230133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               257, 63
               

               Conread position:
               7-312
               

               Cow position:
               chr1:98551577-98551877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               116, 36
               

               Conread position:
               7-314
               

               Cow position:
               chr1:76470513-76470804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 115
               

               Conread position:
               7-315
               

               Cow position:
               chr1:98360544-98360245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               32, 103
               

               Conread position:
               7-318
               

               Cow position:
               chr1:21835806-21836095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               250, 38
               

               Conread position:
               7-321
               

               Cow position:
               chr1:82884529-82884230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               203, 35
               

               Conread position:
               7-322
               

               Cow position:
               chr1:52994888-52995194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 35
               

               Conread position:
               7-327
               

               Cow position:
               chr1:65909387-65909683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               7-330
               

               Cow position:
               chr1:47233618-47233301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 36
               

               Conread position:
               7-332
               

               Cow position:
               chr1:23512794-23512478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 35
               

               Conread position:
               7-332
               

               Cow position:
               chr1:36874875-36875205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 35
               

               Conread position:
               7-334
               

               Cow position:
               chr1:24445766-24445442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               8-157
               

               Cow position:
               chr1:20287980-20288127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-170
               

               Cow position:
               chr1:64962807-64962648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               39, 82
               

               Conread position:
               8-174
               

               Cow position:
               chr1:63905609-63905451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               8-175
               

               Cow position:
               chr1:666226-666390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               8-180
               

               Cow position:
               chr1:99095223-99095393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               166, 124
               

               Conread position:
               8-182
               

               Cow position:
               chr1:3243799-3243967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               8-186
               

               Cow position:
               chr1:57264134-57263957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-187
               

               Cow position:
               chr1:47008893-47009069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-213
               

               Cow position:
               chr1:55260568-55260373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               8-216
               

               Cow position:
               chr1:100400340-100400127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               35, 129
               

               Conread position:
               8-218
               

               Cow position:
               chr1:1165467-1165666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               8-224
               

               Cow position:
               chr1:9470536-9470325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               8-236
               

               Cow position:
               chr1:50045661-50045888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               53, 28
               

               Conread position:
               8-252
               

               Cow position:
               chr1:55146667-55146895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               8-254
               

               Cow position:
               chr1:43703269-43703508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-254
               

               Cow position:
               chr1:95178814-95179053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 113
               

               Conread position:
               8-260
               

               Cow position:
               chr1:62291829-62291596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-263
               

               Cow position:
               chr1:75141864-75142105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               8-264
               

               Cow position:
               chr1:46218443-46218682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-265
               

               Cow position:
               chr1:46030495-46030256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               8-270
               

               Cow position:
               chr1:24407025-24406781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               256, 35
               

               Conread position:
               8-282
               

               Cow position:
               chr1:39225063-39224800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               254, 34
               

               Conread position:
               8-284
               

               Cow position:
               chr1:21787192-21787466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 34
               

               Conread position:
               8-284
               

               Cow position:
               chr1:57575897-57575633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               252, 34
               

               Conread position:
               8-284
               

               Cow position:
               chr1:72011948-72011683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 104
               

               Conread position:
               8-286
               

               Cow position:
               chr1:89510060-89509789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               106, 34
               

               Conread position:
               8-286
               

               Cow position:
               chr1:90595693-90595438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               27, 122
               

               Conread position:
               8-288
               

               Cow position:
               chr1:15547330-15547604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               29, 92
               

               Conread position:
               8-289
               

               Cow position:
               chr1:31272579-31272308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-290
               

               Cow position:
               chr1:6941327-6941605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               171, 37
               

               Conread position:
               8-290
               

               Cow position:
               chr1:6958740-6959018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               164, 37
               

               Conread position:
               8-291
               

               Cow position:
               chr1:8483-8752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               256, 67
               

               Conread position:
               8-291
               

               Cow position:
               chr1:57420866-57420599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               256, 115
               

               Conread position:
               8-292
               

               Cow position:
               chr1:43311913-43311633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 5
               

               Conread position:
               8-292
               

               Cow position:
               chr1:95100824-95101090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               8-294
               

               Cow position:
               chr1:96081346-96081618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               8-296
               

               Cow position:
               chr1:53369940-53370225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               31, 76
               

               Conread position:
               8-296
               

               Cow position:
               chr1:72068977-72068692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 34
               

               Conread position:
               8-296
               

               Cow position:
               chr1:76613270-76612993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               30, 74
               

               Conread position:
               8-297
               

               Cow position:
               chr1:29451780-29452061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               33, 71
               

               Conread position:
               8-297
               

               Cow position:
               chr1:76740822-76740534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               35, 106
               

               Conread position:
               8-300
               

               Cow position:
               chr1:61742599-61742312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               219, 114
               

               Conread position:
               8-301
               

               Cow position:
               chr1:41115853-41115573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               151, 37
               

               Conread position:
               8-302
               

               Cow position:
               chr1:68763820-68763541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-303
               

               Cow position:
               chr1:13413892-13414173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               250, 17
               

               Conread position:
               8-307
               

               Cow position:
               chr1:85550216-85549928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 34
               

               Conread position:
               8-309
               

               Cow position:
               chr1:39069093-39068802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 34
               

               Conread position:
               8-309
               

               Cow position:
               chr1:69264677-69264964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 58
               

               Conread position:
               8-314
               

               Cow position:
               chr1:11226380-11226090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               248, 55
               

               Conread position:
               8-323
               

               Cow position:
               chr1:36932019-36932324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               256, 34
               

               Conread position:
               8-337
               

               Cow position:
               chr1:97938828-97939140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 110
               

               Conread position:
               9-151
               

               Cow position:
               chr1:45673571-45673715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               9-174
               

               Cow position:
               chr1:56748456-56748624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               9-217
               

               Cow position:
               chr1:7609478-7609686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               9-218
               

               Cow position:
               chr1:6228722-6228517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               9-220
               

               Cow position:
               chr1:19568715-19568920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               9-221
               

               Cow position:
               chr1:60707269-60707473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               25, 63
               

               Conread position:
               9-221
               

               Cow position:
               chr1:83659411-83659208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 67
               

               Conread position:
               9-259
               

               Cow position:
               chr1:64189362-64189604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               9-259
               

               Cow position:
               chr1:69415851-69415607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               9-260
               

               Cow position:
               chr1:45289009-45288766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               9-262
               

               Cow position:
               chr1:12978543-12978789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               9-268
               

               Cow position:
               chr1:70434866-70435111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               9-278
               

               Cow position:
               chr1:8349454-8349200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               34, 81
               

               Conread position:
               9-278
               

               Cow position:
               chr1:95056918-95057169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               255, 33
               

               Conread position:
               9-279
               

               Cow position:
               chr1:75933135-75933391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               253, 33
               

               Conread position:
               9-286
               

               Cow position:
               chr1:99642503-99642238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 33
               

               Conread position:
               9-288
               

               Cow position:
               chr1:43505387-43505663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               132, 35
               

               Conread position:
               9-290
               

               Cow position:
               chr1:23186934-23186663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               9-290
               

               Cow position:
               chr1:34686057-34686310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               9-291
               

               Cow position:
               chr1:56711757-56711466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               225
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               107, 194
               

               Conread position:
               9-291
               

               Cow position:
               chr1:71045617-71045881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               255, 33
               

               Conread position:
               9-291
               

               Cow position:
               chr1:71643797-71643523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               198, 87
               

               Conread position:
               9-292
               

               Cow position:
               chr1:42256641-42256364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               93, 102
               

               Conread position:
               9-292
               

               Cow position:
               chr1:64572376-64572651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 33
               

               Conread position:
               9-294
               

               Cow position:
               chr1:72035063-72034787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               81, 114
               

               Conread position:
               9-296
               

               Cow position:
               chr1:4243480-4243191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               165, 101
               

               Conread position:
               9-298
               

               Cow position:
               chr1:7971284-7971556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               161, 34
               

               Conread position:
               9-304
               

               Cow position:
               chr1:101836908-101837192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               253, 119
               

               Conread position:
               9-315
               

               Cow position:
               chr1:36613412-36613102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               9-317
               

               Cow position:
               chr1:89742134-89741833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               195, 94
               

               Conread position:
               9-322
               

               Cow position:
               chr1:86578813-86579130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 34
               

               Conread position:
               9-324
               

               Cow position:
               chr1:83747809-83748107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               132, 33
               

               Conread position:
               9-326
               

               Cow position:
               chr1:45007332-45007642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               164, 56
               

               Conread position:
               9-332
               

               Cow position:
               chr1:101834687-101834994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               253, 33
               

               Conread position:
               9-334
               

               Cow position:
               chr1:90868576-90868267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               10-198
               

               Cow position:
               chr1:20544159-20544344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               161, 31
               

               Conread position:
               10-224
               

               Cow position:
               chr1:79278583-79278374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               10-262
               

               Cow position:
               chr1:81355842-81355596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               172, 30
               

               Conread position:
               10-282
               

               Cow position:
               chr1:54478188-54478455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               124, 32
               

               Conread position:
               10-286
               

               Cow position:
               chr1:68862897-68863158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               10-288
               

               Cow position:
               chr1:16061157-16060871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               10-289
               

               Cow position:
               chr1:100770887-100770599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               15, 107
               

               Conread position:
               10-290
               

               Cow position:
               chr1:13637809-13637526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               10-292
               

               Cow position:
               chr1:41047436-41047164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               10-292
               

               Cow position:
               chr1:71079092-71078823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               10-296
               

               Cow position:
               chr1:62519221-62519505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               104, 154
               

               Conread position:
               10-299
               

               Cow position:
               chr1:82337917-82337635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 32
               

               Conread position:
               10-304
               

               Cow position:
               chr1:88618459-88618747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               254, 74
               

               Conread position:
               10-318
               

               Cow position:
               chr1:48730960-48730669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 14
               

               Conread position:
               10-322
               

               Cow position:
               chr1:18780470-18780161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               179, 36
               

               Conread position:
               10-345
               

               Cow position:
               chr1:81613253-81613580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 33
               

               Conread position:
               10-353
               

               Cow position:
               chr1:3962828-3962486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               144, 33
               

               Conread position:
               11-310
               

               Cow position:
               chr1:71253688-71253400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               252, 31
               

               Conread position:
               12-254
               

               Cow position:
               chr1:41181711-41181944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               12-262
               

               Cow position:
               chr1:89349828-89350072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               12-287
               

               Cow position:
               chr1:100817421-100817675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               13-123
               

               Cow position:
               chr1:604056-604166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-123
               

               Cow position:
               chr1:97806655-97806765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               105, 29
               

               Conread position:
               13-161
               

               Cow position:
               chr1:32013822-32013964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               13-184
               

               Cow position:
               chr1:81470999-81471166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               13-221
               

               Cow position:
               chr1:648190-648395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               13-221
               

               Cow position:
               chr1:42398330-42398121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               28, 121
               

               Conread position:
               13-230
               

               Cow position:
               chr1:101946843-101946635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               13-261
               

               Cow position:
               chr1:81868859-81868623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               13-262
               

               Cow position:
               chr1:94212100-94212333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               154, 85
               

               Conread position:
               13-264
               

               Cow position:
               chr1:44125780-44125529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               101, 29
               

               Conread position:
               13-266
               

               Cow position:
               chr1:9534038-9534273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               13-267
               

               Cow position:
               chr1:26702341-26702095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               13-267
               

               Cow position:
               chr1:60281237-60281486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               107, 29
               

               Conread position:
               13-270
               

               Cow position:
               chr1:66430167-66430407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               251, 38
               

               Conread position:
               13-290
               

               Cow position:
               chr1:11729048-11729311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 29
               

               Conread position:
               13-290
               

               Cow position:
               chr1:19885255-19885517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               251, 30
               

               Conread position:
               13-290
               

               Cow position:
               chr1:86073461-86073732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               251, 88
               

               Conread position:
               13-292
               

               Cow position:
               chr1:78810906-78811177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               251, 29
               

               Conread position:
               13-295
               

               Cow position:
               chr1:26201087-26201373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               99, 21
               

               Conread position:
               13-296
               

               Cow position:
               chr1:54258430-54258708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 66
               

               Conread position:
               13-296
               

               Cow position:
               chr1:79660533-79660260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               243, 21
               

               Conread position:
               13-301
               

               Cow position:
               chr1:40531250-40530955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               27, 162
               

               Conread position:
               13-305
               

               Cow position:
               chr1:84239246-84238972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               251, 29
               

               Conread position:
               13-311
               

               Cow position:
               chr1:48105567-48105279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               127, 29
               

               Conread position:
               13-315
               

               Cow position:
               chr1:61724164-61723853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               29, 117
               

               Conread position:
               13-324
               

               Cow position:
               chr1:5023889-5023597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               13-330
               

               Cow position:
               chr1:52956120-52956426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               153, 29
               

               Conread position:
               13-353
               

               Cow position:
               chr1:100741154-100741472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               251, 30
               

               Conread position:
               14-184
               

               Cow position:
               chr1:100512463-100512642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 116
               

               Conread position:
               14-248
               

               Cow position:
               chr1:29975733-29975500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               210, 46
               

               Conread position:
               14-267
               

               Cow position:
               chr1:75347488-75347737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               14-296
               

               Cow position:
               chr1:724606-724880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               250, 11
               

               Conread position:
               15-243
               

               Cow position:
               chr1:68951496-68951713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               15-288
               

               Cow position:
               chr1:54206950-54206684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               115, 28
               

               Conread position:
               15-290
               

               Cow position:
               chr1:72105282-72105542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 12
               

               Conread position:
               15-298
               

               Cow position:
               chr1:55357417-55357150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               246, 95
               

               Conread position:
               16-290
               

               Cow position:
               chr1:42869066-42868806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               17-263
               

               Cow position:
               chr1:92433871-92434107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               17-308
               

               Cow position:
               chr1:98511799-98512080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               247, 10
               

               Conread position:
               18-221
               

               Cow position:
               chr1:95654840-95654642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               201, 27
               

               Conread position:
               18-262
               

               Cow position:
               chr1:100324871-100324644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               18-270
               

               Cow position:
               chr1:93810301-93810545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               72, 24
               

               Conread position:
               18-294
               

               Cow position:
               chr1:89785781-89786049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               18-295
               

               Cow position:
               chr1:45555236-45555506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               246, 24
               

               Conread position:
               19-209
               

               Cow position:
               chr1:10655354-10655539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               19-215
               

               Cow position:
               chr1:25386923-25387114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               19-220
               

               Cow position:
               chr1:5539404-5539206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               19-221
               

               Cow position:
               chr1:101916043-101916236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               19-262
               

               Cow position:
               chr1:100450311-100450069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               23, 178
               

               Conread position:
               19-270
               

               Cow position:
               chr1:73761484-73761245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               111, 16
               

               Conread position:
               19-294
               

               Cow position:
               chr1:101280843-101280598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               245, 24
               

               Conread position:
               19-295
               

               Cow position:
               chr1:26616198-26615938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               142, 34
               

               Conread position:
               19-295
               

               Cow position:
               chr1:43358142-43357868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               22, 92
               

               Conread position:
               19-295
               

               Cow position:
               chr1:78091905-78092178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 115
               

               Conread position:
               19-300
               

               Cow position:
               chr1:70343914-70344186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               241, 92
               

               Conread position:
               20-218
               

               Cow position:
               chr1:101715213-101715016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               20-284
               

               Cow position:
               chr1:100551842-100552105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               172, 103
               

               Conread position:
               20-292
               

               Cow position:
               chr1:78697898-78697635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 46
               

               Conread position:
               20-310
               

               Cow position:
               chr1:92369606-92369890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               102, 23
               

               Conread position:
               21-214
               

               Cow position:
               chr1:8984810-8984619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               117, 21
               

               Conread position:
               21-221
               

               Cow position:
               chr1:65025137-65025345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 121
               

               Conread position:
               21-221
               

               Cow position:
               chr1:95687227-95687025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               150, 58
               

               Conread position:
               21-223
               

               Cow position:
               chr1:7597118-7597325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 117
               

               Conread position:
               21-268
               

               Cow position:
               chr1:20099246-20099479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               241, 21
               

               Conread position:
               21-289
               

               Cow position:
               chr1:98453460-98453733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               150, 89
               

               Conread position:
               21-294
               

               Cow position:
               chr1:85593649-85593914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               148, 102
               

               Conread position:
               21-296
               

               Cow position:
               chr1:70422179-70422446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               93, 103
               

               Conread position:
               22-290
               

               Cow position:
               chr1:20104144-20104403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               242, 20
               

               Conread position:
               23-279
               

               Cow position:
               chr1:81581997-81582240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               24-282
               

               Cow position:
               chr1:3607688-3607932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               240, 19
               

               Conread position:
               24-289
               

               Cow position:
               chr1:80422154-80422407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               12, 99
               

               Conread position:
               24-290
               

               Cow position:
               chr1:84282951-84283209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               192, 95
               

               Conread position:
               24-296
               

               Cow position:
               chr1:38278160-38277887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               22, 91
               

               Conread position:
               25-296
               

               Cow position:
               chr1:88926510-88926240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               11, 99
               

               Conread position:
               26-194
               

               Cow position:
               chr1:22394674-22394846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               26-296
               

               Cow position:
               chr1:72813492-72813758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 107
               

               Conread position:
               27-267
               

               Cow position:
               chr1:31499508-31499738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               174, 42
               

               Conread position:
               27-289
               

               Cow position:
               chr1:7023000-7023256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               237, 67
               

               Conread position:
               27-294
               

               Cow position:
               chr1:91811668-91811919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               233, 15
               

               Conread position:
               27-296
               

               Cow position:
               chr1:84104173-84103919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               49, 86
               

               Conread position:
               27-302
               

               Cow position:
               chr1:9437428-9437142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               87, 15
               

               Conread position:
               29-262
               

               Cow position:
               chr1:80900000-80900226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               29-286
               

               Cow position:
               chr1:42541478-42541729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               48, 93
               

               Conread position:
               30-269
               

               Cow position:
               chr1:6826405-6826184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               234, 12
               

               Conread position:
               30-293
               

               Cow position:
               chr1:14309154-14308891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               30-318
               

               Cow position:
               chr1:98594460-98594730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               30-323
               

               Cow position:
               chr1:81580057-81580346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               31-209
               

               Cow position:
               chr1:27980797-27980625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               10, 60
               

               Conread position:
               31-296
               

               Cow position:
               chr1:42482087-42482338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               233, 76
               

               Conread position:
               32-290
               

               Cow position:
               chr1:55818945-55819177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 58
               

               Conread position:
               33-288
               

               Cow position:
               chr1:78794339-78794097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               229, 79
               

               Conread position:
               34-115
               

               Cow position:
               chr1:27821469-27821389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               74
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               34-195
               

               Cow position:
               chr1:71716397-71716553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 69
               

               Conread position:
               34-268
               

               Cow position:
               chr1:61543031-61542805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 96
               

               Conread position:
               34-294
               

               Cow position:
               chr1:79135166-79135418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 41
               

               Conread position:
               35-208
               

               Cow position:
               chr1:92926621-92926784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               35-255
               

               Cow position:
               chr1:40482515-40482313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               35-263
               

               Cow position:
               chr1:89835136-89835358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               35-268
               

               Cow position:
               chr1:87936787-87937009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               35-280
               

               Cow position:
               chr1:30418150-30417922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               225, 69
               

               Conread position:
               35-284
               

               Cow position:
               chr1:9013427-9013664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               229, 72
               

               Conread position:
               35-286
               

               Cow position:
               chr1:68827016-68826782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               249, 10
               

               Conread position:
               35-286
               

               Cow position:
               chr1:69695104-69694862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 87
               

               Conread position:
               35-289
               

               Cow position:
               chr1:47790774-47790531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               221, 21
               

               Conread position:
               35-292
               

               Cow position:
               chr1:32001433-32001183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               80, 156
               

               Conread position:
               35-308
               

               Cow position:
               chr1:77424990-77425257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               221, 63
               

               Conread position:
               36-263
               

               Cow position:
               chr1:22944137-22943921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               36-295
               

               Cow position:
               chr1:56225682-56225925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 34
               

               Conread position:
               36-295
               

               Cow position:
               chr1:56618762-56618514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               228, 73
               

               Conread position:
               37-173
               

               Cow position:
               chr1:80942437-80942570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               37-268
               

               Cow position:
               chr1:52052831-52052603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               227, 185
               

               Conread position:
               37-270
               

               Cow position:
               chr1:43822290-43822515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               227, 92
               

               Conread position:
               37-281
               

               Cow position:
               chr1:43855191-43855421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               85, 96
               

               Conread position:
               37-284
               

               Cow position:
               chr1:42360172-42360418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               78, 43
               

               Conread position:
               37-294
               

               Cow position:
               chr1:67114790-67115036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               38-272
               

               Cow position:
               chr1:30189038-30189270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               138, 9
               

               Conread position:
               39-217
               

               Cow position:
               chr1:1964634-1964807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 82
               

               Conread position:
               39-295
               

               Cow position:
               chr1:67919039-67919274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               39-322
               

               Cow position:
               chr1:48769694-48769969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               23, 93
               

               Conread position:
               40-296
               

               Cow position:
               chr1:22823799-22824048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 6
               

               Conread position:
               41-279
               

               Cow position:
               chr1:82880538-82880769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               223, 76
               

               Conread position:
               41-301
               

               Cow position:
               chr1:37886916-37886665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               223, 121
               

               Conread position:
               41-330
               

               Cow position:
               chr1:6972423-6972704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 81
               

               Conread position:
               44-314
               

               Cow position:
               chr1:33997021-33996764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               212, 61
               

               Conread position:
               45-282
               

               Cow position:
               chr1:68676260-68676490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               219, 13
               

               Conread position:
               45-310
               

               Cow position:
               chr1:86062088-86061833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               45-366
               

               Cow position:
               chr1:59147440-59147129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               123, 14
               

               Conread position:
               46-314
               

               Cow position:
               chr1:78068168-78067910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               47-262
               

               Cow position:
               chr1:99793446-99793654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               48-262
               

               Cow position:
               chr1:19227154-19226950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               48-294
               

               Cow position:
               chr1:22730646-22730872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               48-296
               

               Cow position:
               chr1:49082641-49082885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               216, 62
               

               Conread position:
               50-290
               

               Cow position:
               chr1:82513453-82513218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               228, 89
               

               Conread position:
               51-309
               

               Cow position:
               chr1:45670542-45670787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               213, 28
               

               Conread position:
               53-328
               

               Cow position:
               chr1:58186651-58186925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               118, 63
               

               Conread position:
               54-292
               

               Cow position:
               chr1:90904847-90904618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               101, 53
               

               Conread position:
               54-298
               

               Cow position:
               chr1:46030866-46031102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               55-221
               

               Cow position:
               chr1:55089145-55088985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               55-287
               

               Cow position:
               chr1:49825162-49824931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               86, 68
               

               Conread position:
               56-241
               

               Cow position:
               chr1:72684605-72684778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               56-311
               

               Cow position:
               chr1:17317456-17317203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               35, 143
               

               Conread position:
               57-270
               

               Cow position:
               chr1:100576130-100575922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 135
               

               Conread position:
               57-320
               

               Cow position:
               chr1:50991844-50992098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 47
               

               Conread position:
               61-270
               

               Cow position:
               chr1:30504412-30504617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               61-290
               

               Cow position:
               chr1:21954318-21954088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               62, 157
               

               Conread position:
               62-316
               

               Cow position:
               chr1:95153134-95153384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               62-324
               

               Cow position:
               chr1:77892055-77892306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               201, 41
               

               Conread position:
               67-224
               

               Cow position:
               chr1:61560807-61560650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 42
               

               Conread position:
               68-306
               

               Cow position:
               chr1:48214241-48214006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               69, 131
               

               Conread position:
               69-303
               

               Cow position:
               chr1:186355-186132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               195, 54
               

               Conread position:
               70-326
               

               Cow position:
               chr1:68672677-68672430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 53
               

               Conread position:
               71-302
               

               Cow position:
               chr1:37707050-37706827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 68
               

               Conread position:
               71-308
               

               Cow position:
               chr1:27881536-27881761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               193, 49
               

               Conread position:
               80-287
               

               Cow position:
               chr1:45223512-45223714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               184, 57
               

               Conread position:
               80-292
               

               Cow position:
               chr1:73936219-73936008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 146
               

               Conread position:
               80-321
               

               Cow position:
               chr1:40207188-40206945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               127, 50
               

               Conread position:
               82-324
               

               Cow position:
               chr1:98575980-98576217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 49
               

               Conread position:
               83-289
               

               Cow position:
               chr1:102753788-102753993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 46
               

               Conread position:
               85-296
               

               Cow position:
               chr1:3815757-3815543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 98
               

               Conread position:
               86-284
               

               Cow position:
               chr1:101507296-101507489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               87-270
               

               Cow position:
               chr1:62235508-62235331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               177, 45
               

               Conread position:
               90-331
               

               Cow position:
               chr1:99221412-99221178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               229, 85
               

               Conread position:
               92-284
               

               Cow position:
               chr1:6854359-6854178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               172, 14
               

               Conread position:
               92-290
               

               Cow position:
               chr1:81481440-81481246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               172, 37
               

               Conread position:
               93-292
               

               Cow position:
               chr1:84768934-84768741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               171, 36
               

               Conread position:
               99-286
               

               Cow position:
               chr1:95974346-95974531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 31
               

               Conread position:
               99-301
               

               Cow position:
               chr1:500124-500322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               100-294
               

               Cow position:
               chr1:84203465-84203651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               103-287
               

               Cow position:
               chr1:69481996-69481817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               103-294
               

               Cow position:
               chr1:2462335-2462515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               161, 84
               

               Conread position:
               106-296
               

               Cow position:
               chr1:77739675-77739863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               16, 119
               

               Conread position:
               112-296
               

               Cow position:
               chr1:73721321-73721503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               139, 111
               

               Conread position:
               117-270
               

               Cow position:
               chr1:5006125-5006277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 92
               

               Conread position:
               117-288
               

               Cow position:
               chr1:31256260-31256092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               119-283
               

               Cow position:
               chr1:102648249-102648407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               138, 13
               

               Conread position:
               120-315
               

               Cow position:
               chr1:42537352-42537163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 20
               

               Conread position:
               121-285
               

               Cow position:
               chr1:63078980-63079138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               143, 82
               

               Conread position:
               121-304
               

               Cow position:
               chr1:73719431-73719610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               123-316
               

               Cow position:
               chr1:98708607-98708787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               124-281
               

               Cow position:
               chr1:74082007-74081855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               140, 8
               

               Conread position:
               124-300
               

               Cow position:
               chr1:88359847-88360024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               23, 106
               

               Conread position:
               125-267
               

               Cow position:
               chr1:97144489-97144353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               84, 5
               

               Conread position:
               126-294
               

               Cow position:
               chr1:102768156-102768317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               22, 6
               

               Conread position:
               127-317
               

               Cow position:
               chr1:45478884-45478700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               129-320
               

               Cow position:
               chr1:40935791-40935603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               133-289
               

               Cow position:
               chr1:54157276-54157431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 92
               

               Conread position:
               133-296
               

               Cow position:
               chr1:67529037-67529197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               131, 90
               

               Conread position:
               133-329
               

               Cow position:
               chr1:95676307-95676113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               145, 20
               

               Conread position:
               133-341
               

               Cow position:
               chr1:98897712-98897508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               129, 90
               

               Conread position:
               135-270
               

               Cow position:
               chr1:85712424-85712555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               137-300
               

               Cow position:
               chr1:73551523-73551363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               127, 9
               

               Conread position:
               138-283
               

               Cow position:
               chr1:61011168-61011310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               126, 85
               

               Conread position:
               138-288
               

               Cow position:
               chr1:242544-242691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               122, 89
               

               Conread position:
               138-292
               

               Cow position:
               chr1:3914931-3914781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               126, 49
               

               Conread position:
               138-310
               

               Cow position:
               chr1:68127203-68127035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               126, 85
               

               Conread position:
               138-314
               

               Cow position:
               chr1:98683861-98684033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               126, 67
               

               Conread position:
               138-316
               

               Cow position:
               chr1:3417335-3417517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 95
               

               Conread position:
               138-332
               

               Cow position:
               chr1:59659547-59659361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 38
               

               Conread position:
               138-339
               

               Cow position:
               chr1:45874091-45873884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               52, 93
               

               Conread position:
               139-320
               

               Cow position:
               chr1:8670761-8670938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               125, 84
               

               Conread position:
               140-283
               

               Cow position:
               chr1:45315647-45315507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               124, 83
               

               Conread position:
               140-298
               

               Cow position:
               chr1:759429-759274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               124, 83
               

               Conread position:
               143-287
               

               Cow position:
               chr1:49839477-49839617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               121, 65
               

               Conread position:
               143-295
               

               Cow position:
               chr1:69445321-69445473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               112, 80
               

               Conread position:
               145-292
               

               Cow position:
               chr1:101525931-101525787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               119, 78
               

               Conread position:
               146-275
               

               Cow position:
               chr1:64706488-64706613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 76
               

               Conread position:
               153-287
               

               Cow position:
               chr1:32014200-32014329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               111, 10
               

               Conread position:
               155-321
               

               Cow position:
               chr1:80306367-80306210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               109, 32
               

               Conread position:
               164-275
               

               Cow position:
               chr1:32787941-32787833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               100, 34
               

               Conread position:
               164-279
               

               Cow position:
               chr1:81179335-81179218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               164-285
               

               Cow position:
               chr1:19855170-19855283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               97, 23
               

               Conread position:
               164-294
               

               Cow position:
               chr1:70416747-70416621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               164-294
               

               Cow position:
               chr1:98557106-98556979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               164-296
               

               Cow position:
               chr1:83606437-83606308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               101, 59
               

               Conread position:
               164-332
               

               Cow position:
               chr1:78185855-78185689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               164-340
               

               Cow position:
               chr1:42822284-42822452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               165-285
               

               Cow position:
               chr1:84288417-84288535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               99, 58
               

               Conread position:
               165-306
               

               Cow position:
               chr1:55194232-55194095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               99, 58
               

               Conread position:
               165-307
               

               Cow position:
               chr1:53540589-53540727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               165-316
               

               Cow position:
               chr1:44269105-44269250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 27
               

               Conread position:
               165-327
               

               Cow position:
               chr1:23055061-23055221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               98, 58
               

               Conread position:
               166-288
               

               Cow position:
               chr1:81638563-81638681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               98, 57
               

               Conread position:
               166-290
               

               Cow position:
               chr1:63905244-63905125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               98, 57
               

               Conread position:
               166-292
               

               Cow position:
               chr1:63460893-63461017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               98, 57
               

               Conread position:
               168-319
               

               Cow position:
               chr1:99024214-99024066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               96, 55
               

               Conread position:
               171-314
               

               Cow position:
               chr1:86383786-86383646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               93, 47
               

               Conread position:
               173-306
               

               Cow position:
               chr1:23180116-23180246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               89, 50
               

               Conread position:
               174-337
               

               Cow position:
               chr1:49358071-49358219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               90, 49
               

               Conread position:
               176-317
               

               Cow position:
               chr1:1875411-1875550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               177-330
               

               Cow position:
               chr1:52506146-52505994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               87, 50
               

               Conread position:
               178-292
               

               Cow position:
               chr1:100800742-100800632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               178-309
               

               Cow position:
               chr1:34318759-34318631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               86, 45
               

               Conread position:
               178-314
               

               Cow position:
               chr1:3431333-3431202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               178-329
               

               Cow position:
               chr1:76080834-76080977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               86, 41
               

               Conread position:
               178-333
               

               Cow position:
               chr1:70291814-70291964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               84, 45
               

               Conread position:
               179-296
               

               Cow position:
               chr1:3155006-3154888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               181-337
               

               Cow position:
               chr1:69179551-69179707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               83, 46
               

               Conread position:
               194-299
               

               Cow position:
               chr1:50843809-50843706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 29
               

               Conread position:
               197-334
               

               Cow position:
               chr1:70001791-70001656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               7, 27
               

               Conread position:
               205-336
               

               Cow position:
               chr1:15167885-15167755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               244-327
               

               Cow position:
               chr1:75189109-75189026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               84
               

               Alignm identity:
               75
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-135
Cow position:	chr1:73536589-73536725 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	111
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	9, 133
Conread position:	1-170
Cow position:	chr1:85826198-85826366 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	125
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	124, 41
Conread position:	1-173
Cow position:	chr1:50679432-50679257 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	130
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	7, 111
Conread position:	1-176
Cow position:	chr1:11873505-11873336 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	126
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	40, 0
Conread position:	1-182
Cow position:	chr1:51684655-51684838 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	146
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	127, 0
Conread position:	1-191
Cow position:	chr1:77502934-77502745 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	138
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	8, 129
Conread position:	1-209
Cow position:	chr1:83082856-83083066 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	152
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	7, 131
Conread position:	1-212
Cow position:	chr1:26729579-26729779 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	160
Alignm E-value:	7e-35
Alignm gaps (pig, cow):	34, 0
Conread position:	1-214
Cow position:	chr1:57639669-57639452 (view UCSC Genome Browser custom track)
Alignm length:	221
Alignm identity:	159
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	42, 139
Conread position:	1-216
Cow position:	chr1:65905153-65904933 (view UCSC Genome Browser custom track)
Alignm length:	221
Alignm identity:	155
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	7, 0
Conread position:	1-220
Cow position:	chr1:31765539-31765303 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	169
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	7, 0
Conread position:	1-221
Cow position:	chr1:63138692-63138911 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	158
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	7, 120
Conread position:	1-224
Cow position:	chr1:44769260-44769036 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	168
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	9, 43
Conread position:	1-244
Cow position:	chr1:85596791-85597027 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	190
Alignm E-value:	9.99967e-42
Alignm gaps (pig, cow):	9, 136
Conread position:	1-258
Cow position:	chr1:24542727-24542467 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	185
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	115, 43
Conread position:	1-262
Cow position:	chr1:101867207-101867456 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	185
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	116, 42
Conread position:	1-263
Cow position:	chr1:64251197-64250945 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	192
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	111, 35
Conread position:	1-264
Cow position:	chr1:81228485-81228225 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	206
Alignm E-value:	0
Alignm gaps (pig, cow):	41, 79
Conread position:	1-269
Cow position:	chr1:37309663-37309404 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	213
Alignm E-value:	0
Alignm gaps (pig, cow):	9, 92
Conread position:	1-270
Cow position:	chr1:30047739-30047487 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	198
Alignm E-value:	1e-37
Alignm gaps (pig, cow):	263, 44