Non-Coding RNA Search

Cow genome map


           Conread name:
           rcbl0_019670.y1
        

               Conread position:
               1-95
               

               Cow position:
               chr11:19577464-19577559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr11:43914040-43914197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               9, 133
               

               Conread position:
               1-162
               

               Cow position:
               chr11:49105884-49106045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               43, 118
               

               Conread position:
               1-170
               

               Cow position:
               chr11:21830522-21830352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               126, 41
               

               Conread position:
               1-173
               

               Cow position:
               chr11:47586518-47586351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr11:62045227-62045395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               1-177
               

               Cow position:
               chr11:30110794-30110965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               1-199
               

               Cow position:
               chr11:70459401-70459588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr11:21428162-21427961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-216
               

               Cow position:
               chr11:36981394-36981605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 96
               

               Conread position:
               1-218
               

               Cow position:
               chr11:9463661-9463879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 111
               

               Conread position:
               1-218
               

               Cow position:
               chr11:64077676-64077458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 124
               

               Conread position:
               1-220
               

               Cow position:
               chr11:3726115-3726335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               7, 131
               

               Conread position:
               1-220
               

               Cow position:
               chr11:74380024-74380236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 75
               

               Conread position:
               1-221
               

               Cow position:
               chr11:31525696-31525925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr11:59862042-59862254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 72
               

               Conread position:
               1-221
               

               Cow position:
               chr11:80788083-80787860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               7, 133
               

               Conread position:
               1-223
               

               Cow position:
               chr11:30120835-30120613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               126, 41
               

               Conread position:
               1-223
               

               Cow position:
               chr11:45872490-45872262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               1-254
               

               Cow position:
               chr11:48383357-48383596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 111
               

               Conread position:
               1-262
               

               Cow position:
               chr11:23128713-23128456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               1-264
               

               Cow position:
               chr11:38638947-38639197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 46
               

               Conread position:
               1-270
               

               Cow position:
               chr11:36799472-36799215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               215, 115
               

               Conread position:
               1-271
               

               Cow position:
               chr11:64638705-64638432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               211
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               9, 117
               

               Conread position:
               1-273
               

               Cow position:
               chr11:40258581-40258314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 112
               

               Conread position:
               1-276
               

               Cow position:
               chr11:18572632-18572899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               259, 41
               

               Conread position:
               1-290
               

               Cow position:
               chr11:19247372-19247087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               9, 102
               

               Conread position:
               1-290
               

               Cow position:
               chr11:20238500-20238791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               9, 43
               

               Conread position:
               1-290
               

               Cow position:
               chr11:48544269-48544553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               158, 11
               

               Conread position:
               1-290
               

               Cow position:
               chr11:83230560-83230288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               263, 41
               

               Conread position:
               1-292
               

               Cow position:
               chr11:13043320-13043031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               1-295
               

               Cow position:
               chr11:46746457-46746756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               1-295
               

               Cow position:
               chr11:83687604-83687316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               1-296
               

               Cow position:
               chr11:41215570-41215851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 123
               

               Conread position:
               1-298
               

               Cow position:
               chr11:63847678-63847965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               1-298
               

               Cow position:
               chr11:68905245-68904957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               13, 45
               

               Conread position:
               1-298
               

               Cow position:
               chr11:83066325-83066607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               133, 42
               

               Conread position:
               1-303
               

               Cow position:
               chr11:2083966-2084269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 133
               

               Conread position:
               1-308
               

               Cow position:
               chr11:21894323-21894032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               37, 97
               

               Conread position:
               1-308
               

               Cow position:
               chr11:36286525-36286825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 120
               

               Conread position:
               1-308
               

               Cow position:
               chr11:73512601-73512317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-312
               

               Cow position:
               chr11:71501305-71500998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 120
               

               Conread position:
               1-318
               

               Cow position:
               chr11:77128490-77128801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 35
               

               Conread position:
               1-321
               

               Cow position:
               chr11:38577945-38577637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               9, 87
               

               Conread position:
               1-329
               

               Cow position:
               chr11:65843265-65842925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 43
               

               Conread position:
               2-114
               

               Cow position:
               chr11:29266372-29266484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-121
               

               Cow position:
               chr11:29786776-29786655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               2-129
               

               Cow position:
               chr11:33364176-33364302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               2-179
               

               Cow position:
               chr11:47165310-47165136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               2-183
               

               Cow position:
               chr11:53130642-53130822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               2-188
               

               Cow position:
               chr11:37068478-37068303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               2-205
               

               Cow position:
               chr11:60302127-60301930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               2-207
               

               Cow position:
               chr11:18210514-18210315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               149, 40
               

               Conread position:
               2-209
               

               Cow position:
               chr11:18591601-18591399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               9, 41
               

               Conread position:
               2-209
               

               Cow position:
               chr11:61246628-61246424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               2-212
               

               Cow position:
               chr11:67207570-67207767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 112
               

               Conread position:
               2-213
               

               Cow position:
               chr11:48042208-48041994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               41, 133
               

               Conread position:
               2-218
               

               Cow position:
               chr11:5197244-5197031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               2-220
               

               Cow position:
               chr11:16910537-16910313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               15, 113
               

               Conread position:
               2-221
               

               Cow position:
               chr11:6400238-6400017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               155, 15
               

               Conread position:
               2-221
               

               Cow position:
               chr11:77682997-77683221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               2-225
               

               Cow position:
               chr11:30596818-30597044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               2-229
               

               Cow position:
               chr11:21728438-21728221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               2-246
               

               Cow position:
               chr11:62880796-62880564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               41, 80
               

               Conread position:
               2-265
               

               Cow position:
               chr11:74316544-74316796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               2-282
               

               Cow position:
               chr11:29960137-29960402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               262, 40
               

               Conread position:
               2-283
               

               Cow position:
               chr11:42083309-42083573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               262, 62
               

               Conread position:
               2-283
               

               Cow position:
               chr11:49152782-49153054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               2-284
               

               Cow position:
               chr11:9270897-9270622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 117
               

               Conread position:
               2-284
               

               Cow position:
               chr11:44636927-44636648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 41
               

               Conread position:
               2-285
               

               Cow position:
               chr11:20602059-20602334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 88
               

               Conread position:
               2-286
               

               Cow position:
               chr11:24601805-24602077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               224, 42
               

               Conread position:
               2-287
               

               Cow position:
               chr11:30354900-30355168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 61
               

               Conread position:
               2-288
               

               Cow position:
               chr11:2917754-2917476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               256, 40
               

               Conread position:
               2-290
               

               Cow position:
               chr11:34829949-34829673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               7, 27
               

               Conread position:
               2-290
               

               Cow position:
               chr11:53778446-53778727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 120
               

               Conread position:
               2-292
               

               Cow position:
               chr11:23232686-23232405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               2-294
               

               Cow position:
               chr11:35684664-35684383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               2-294
               

               Cow position:
               chr11:62620214-62620493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               2-294
               

               Cow position:
               chr11:85723531-85723811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               2-295
               

               Cow position:
               chr11:47639201-47638908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 131
               

               Conread position:
               2-296
               

               Cow position:
               chr11:65826914-65826632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               2-296
               

               Cow position:
               chr11:81406327-81406050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               207, 34
               

               Conread position:
               2-303
               

               Cow position:
               chr11:30475833-30476125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               12, 87
               

               Conread position:
               2-313
               

               Cow position:
               chr11:16907211-16906915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 40
               

               Conread position:
               2-314
               

               Cow position:
               chr11:4436156-4436452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               11, 107
               

               Conread position:
               2-323
               

               Cow position:
               chr11:33310801-33311123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 101
               

               Conread position:
               2-330
               

               Cow position:
               chr11:9837270-9836933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               41, 131
               

               Conread position:
               2-357
               

               Cow position:
               chr11:33348354-33348012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               3-275
               

               Cow position:
               chr11:42358952-42359217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               214, 38
               

               Conread position:
               3-299
               

               Cow position:
               chr11:39499191-39499479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               138, 41
               

               Conread position:
               4-220
               

               Cow position:
               chr11:29916363-29916588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               12, 61
               

               Conread position:
               4-221
               

               Cow position:
               chr11:4732170-4732389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 110
               

               Conread position:
               4-270
               

               Cow position:
               chr11:52983510-52983767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               4-276
               

               Cow position:
               chr11:44222724-44222984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               260, 39
               

               Conread position:
               5-295
               

               Cow position:
               chr11:70978893-70978618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               281, 73
               

               Conread position:
               5-296
               

               Cow position:
               chr11:17493313-17493601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 37
               

               Conread position:
               6-216
               

               Cow position:
               chr11:20684741-20684530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               30, 116
               

               Conread position:
               6-221
               

               Cow position:
               chr11:33287117-33286910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 70
               

               Conread position:
               6-262
               

               Cow position:
               chr11:47544966-47545215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               124, 36
               

               Conread position:
               6-285
               

               Cow position:
               chr11:4663210-4662940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               6-304
               

               Cow position:
               chr11:6594414-6594112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               119, 104
               

               Conread position:
               6-306
               

               Cow position:
               chr11:61454696-61454388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               38, 90
               

               Conread position:
               7-135
               

               Cow position:
               chr11:25165279-25165405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-159
               

               Cow position:
               chr11:75748270-75748419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               7-173
               

               Cow position:
               chr11:8105618-8105784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               120, 94
               

               Conread position:
               7-173
               

               Cow position:
               chr11:15525790-15525966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               7-173
               

               Cow position:
               chr11:62808813-62808653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               7-173
               

               Cow position:
               chr11:63516663-63516826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-179
               

               Cow position:
               chr11:36301241-36301073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 116
               

               Conread position:
               7-182
               

               Cow position:
               chr11:32609839-32610006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-182
               

               Cow position:
               chr11:36672211-36672036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 118
               

               Conread position:
               7-190
               

               Cow position:
               chr11:38193991-38194173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 41
               

               Conread position:
               7-191
               

               Cow position:
               chr11:33468548-33468727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               7-194
               

               Cow position:
               chr11:83196335-83196517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-199
               

               Cow position:
               chr11:17112795-17112608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               29, 60
               

               Conread position:
               7-201
               

               Cow position:
               chr11:38071193-38071388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 118
               

               Conread position:
               7-203
               

               Cow position:
               chr11:42793136-42792944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-203
               

               Cow position:
               chr11:81174726-81174913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               7-209
               

               Cow position:
               chr11:10076602-10076803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               40, 116
               

               Conread position:
               7-212
               

               Cow position:
               chr11:67136603-67136393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               34, 62
               

               Conread position:
               7-216
               

               Cow position:
               chr11:68770197-68770403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 123
               

               Conread position:
               7-217
               

               Cow position:
               chr11:18341199-18340998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               7-218
               

               Cow position:
               chr11:18244102-18243898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               7-219
               

               Cow position:
               chr11:37347313-37347516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 111
               

               Conread position:
               7-221
               

               Cow position:
               chr11:81611606-81611815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 6
               

               Conread position:
               7-223
               

               Cow position:
               chr11:33293951-33293730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 121
               

               Conread position:
               7-223
               

               Cow position:
               chr11:53773512-53773730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               7-223
               

               Cow position:
               chr11:77766763-77766546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               7-231
               

               Cow position:
               chr11:57724989-57724767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 107
               

               Conread position:
               7-240
               

               Cow position:
               chr11:61859060-61858841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               31, 54
               

               Conread position:
               7-261
               

               Cow position:
               chr11:77546254-77546498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               7-262
               

               Cow position:
               chr11:21438052-21438292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               7-262
               

               Cow position:
               chr11:47899116-47899352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-265
               

               Cow position:
               chr11:75874915-75874668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               127, 35
               

               Conread position:
               7-266
               

               Cow position:
               chr11:1157481-1157732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               83, 110
               

               Conread position:
               7-267
               

               Cow position:
               chr11:71008972-71009213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               7-268
               

               Cow position:
               chr11:35874155-35873912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               107, 27
               

               Conread position:
               7-268
               

               Cow position:
               chr11:69810743-69810994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               137, 35
               

               Conread position:
               7-269
               

               Cow position:
               chr11:36986801-36987041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               29, 57
               

               Conread position:
               7-269
               

               Cow position:
               chr11:82940785-82940534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 57
               

               Conread position:
               7-270
               

               Cow position:
               chr11:1362641-1362375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 219
               

               Conread position:
               7-270
               

               Cow position:
               chr11:38874567-38874313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               254, 125
               

               Conread position:
               7-270
               

               Cow position:
               chr11:73354218-73353967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 105
               

               Conread position:
               7-273
               

               Cow position:
               chr11:7394978-7395224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               7-275
               

               Cow position:
               chr11:26483550-26483803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               175, 113
               

               Conread position:
               7-282
               

               Cow position:
               chr11:71493021-71492757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 115
               

               Conread position:
               7-283
               

               Cow position:
               chr11:43897977-43898244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-286
               

               Cow position:
               chr11:80923487-80923214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               112, 35
               

               Conread position:
               7-287
               

               Cow position:
               chr11:41809638-41809383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               257, 62
               

               Conread position:
               7-287
               

               Cow position:
               chr11:63482590-63482321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 122
               

               Conread position:
               7-288
               

               Cow position:
               chr11:11232618-11232348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               118, 35
               

               Conread position:
               7-288
               

               Cow position:
               chr11:25620560-25620280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               186, 58
               

               Conread position:
               7-288
               

               Cow position:
               chr11:40818803-40818515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 141
               

               Conread position:
               7-288
               

               Cow position:
               chr11:65607854-65607578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 35
               

               Conread position:
               7-289
               

               Cow position:
               chr11:44031839-44032123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               110, 28
               

               Conread position:
               7-289
               

               Cow position:
               chr11:62155461-62155750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 226
               

               Conread position:
               7-290
               

               Cow position:
               chr11:41020-41292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               113, 35
               

               Conread position:
               7-290
               

               Cow position:
               chr11:11125499-11125775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-290
               

               Cow position:
               chr11:30924986-30925267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               115, 58
               

               Conread position:
               7-290
               

               Cow position:
               chr11:34113102-34113379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 34
               

               Conread position:
               7-290
               

               Cow position:
               chr11:70086161-70086445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               7-291
               

               Cow position:
               chr11:8988391-8988118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 35
               

               Conread position:
               7-291
               

               Cow position:
               chr11:45898216-45897941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               152, 35
               

               Conread position:
               7-291
               

               Cow position:
               chr11:87155354-87155633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               37, 95
               

               Conread position:
               7-292
               

               Cow position:
               chr11:2907682-2907414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-292
               

               Cow position:
               chr11:7590030-7590303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-292
               

               Cow position:
               chr11:10095183-10095460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               256, 53
               

               Conread position:
               7-292
               

               Cow position:
               chr11:11558004-11558286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               116, 35
               

               Conread position:
               7-292
               

               Cow position:
               chr11:30639109-30638835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               29, 97
               

               Conread position:
               7-292
               

               Cow position:
               chr11:48295869-48296145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-292
               

               Cow position:
               chr11:52297384-52297106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               152, 35
               

               Conread position:
               7-292
               

               Cow position:
               chr11:67747121-67747394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               116, 39
               

               Conread position:
               7-293
               

               Cow position:
               chr11:80530202-80530474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               31, 111
               

               Conread position:
               7-294
               

               Cow position:
               chr11:15772883-15772596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 118
               

               Conread position:
               7-294
               

               Cow position:
               chr11:30192009-30192296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               55, 35
               

               Conread position:
               7-294
               

               Cow position:
               chr11:35153988-35153704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               259, 35
               

               Conread position:
               7-294
               

               Cow position:
               chr11:36112258-36112535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               7-294
               

               Cow position:
               chr11:67804588-67804859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 92
               

               Conread position:
               7-295
               

               Cow position:
               chr11:17227809-17227527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               117, 35
               

               Conread position:
               7-295
               

               Cow position:
               chr11:38670519-38670806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               215, 103
               

               Conread position:
               7-295
               

               Cow position:
               chr11:60470342-60470081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               81, 49
               

               Conread position:
               7-296
               

               Cow position:
               chr11:8545176-8544899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 50
               

               Conread position:
               7-296
               

               Cow position:
               chr11:18509182-18508912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               53, 132
               

               Conread position:
               7-296
               

               Cow position:
               chr11:26144262-26143977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 91
               

               Conread position:
               7-296
               

               Cow position:
               chr11:30209984-30209704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               257, 26
               

               Conread position:
               7-296
               

               Cow position:
               chr11:59463800-59463524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               231, 63
               

               Conread position:
               7-296
               

               Cow position:
               chr11:64029421-64029150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               257, 68
               

               Conread position:
               7-296
               

               Cow position:
               chr11:71868772-71868484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               37, 75
               

               Conread position:
               7-296
               

               Cow position:
               chr11:76889885-76890164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               255, 94
               

               Conread position:
               7-297
               

               Cow position:
               chr11:67600619-67600902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 35
               

               Conread position:
               7-298
               

               Cow position:
               chr11:13592573-13592856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 74
               

               Conread position:
               7-298
               

               Cow position:
               chr11:45277317-45277031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 110
               

               Conread position:
               7-298
               

               Cow position:
               chr11:58102935-58102642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               165, 63
               

               Conread position:
               7-298
               

               Cow position:
               chr11:65762763-65762467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               107, 35
               

               Conread position:
               7-298
               

               Cow position:
               chr11:70609622-70609917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 132
               

               Conread position:
               7-298
               

               Cow position:
               chr11:79728833-79728548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 103
               

               Conread position:
               7-299
               

               Cow position:
               chr11:1380518-1380797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               7-299
               

               Cow position:
               chr11:8525274-8524994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-299
               

               Cow position:
               chr11:41176113-41175827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               242, 35
               

               Conread position:
               7-300
               

               Cow position:
               chr11:32436168-32436455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 67
               

               Conread position:
               7-301
               

               Cow position:
               chr11:30954835-30955124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 28
               

               Conread position:
               7-302
               

               Cow position:
               chr11:6245158-6245438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               257, 105
               

               Conread position:
               7-302
               

               Cow position:
               chr11:42044151-42043872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 43
               

               Conread position:
               7-302
               

               Cow position:
               chr11:48272034-48272325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 37
               

               Conread position:
               7-303
               

               Cow position:
               chr11:4207149-4207434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               116, 35
               

               Conread position:
               7-303
               

               Cow position:
               chr11:7924750-7924468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               29, 71
               

               Conread position:
               7-303
               

               Cow position:
               chr11:34145077-34144799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               257, 34
               

               Conread position:
               7-306
               

               Cow position:
               chr11:63909821-63909538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 63
               

               Conread position:
               7-307
               

               Cow position:
               chr11:20761683-20761972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-307
               

               Cow position:
               chr11:44642450-44642164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               127, 35
               

               Conread position:
               7-309
               

               Cow position:
               chr11:9221887-9221602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               251, 35
               

               Conread position:
               7-311
               

               Cow position:
               chr11:377809-377509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 110
               

               Conread position:
               7-311
               

               Cow position:
               chr11:2092176-2092461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               7-311
               

               Cow position:
               chr11:35363334-35363614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               7-311
               

               Cow position:
               chr11:70484022-70483721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               109, 28
               

               Conread position:
               7-313
               

               Cow position:
               chr11:66425051-66424744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               41, 35
               

               Conread position:
               7-313
               

               Cow position:
               chr11:71455627-71455954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 302
               

               Conread position:
               7-315
               

               Cow position:
               chr11:13499849-13500155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               7-315
               

               Cow position:
               chr11:25386900-25387207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               7-316
               

               Cow position:
               chr11:62225823-62226124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-317
               

               Cow position:
               chr11:43430614-43430320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               7-317
               

               Cow position:
               chr11:77758921-77758622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               7-319
               

               Cow position:
               chr11:34032366-34032057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 122
               

               Conread position:
               7-320
               

               Cow position:
               chr11:69119139-69119435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               7-326
               

               Cow position:
               chr11:33341309-33340999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               7-330
               

               Cow position:
               chr11:3233920-3234228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               34, 72
               

               Conread position:
               7-331
               

               Cow position:
               chr11:76114491-76114797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               251, 35
               

               Conread position:
               7-332
               

               Cow position:
               chr11:30879519-30879823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               257, 73
               

               Conread position:
               7-336
               

               Cow position:
               chr11:34962897-34963229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               7-338
               

               Cow position:
               chr11:23138225-23137894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 100
               

               Conread position:
               7-339
               

               Cow position:
               chr11:61958910-61958582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 100
               

               Conread position:
               7-340
               

               Cow position:
               chr11:73924723-73924399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               218, 36
               

               Conread position:
               8-161
               

               Cow position:
               chr11:35148998-35149148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               34, 104
               

               Conread position:
               8-173
               

               Cow position:
               chr11:62965716-62965549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 120
               

               Conread position:
               8-209
               

               Cow position:
               chr11:27386508-27386304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               8-212
               

               Cow position:
               chr11:56349178-56348985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               8-217
               

               Cow position:
               chr11:9088466-9088255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               153, 102
               

               Conread position:
               8-218
               

               Cow position:
               chr11:2788216-2788437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 117
               

               Conread position:
               8-218
               

               Cow position:
               chr11:15503941-15504156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               33, 106
               

               Conread position:
               8-218
               

               Cow position:
               chr11:80756946-80756737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               35, 105
               

               Conread position:
               8-221
               

               Cow position:
               chr11:32378024-32378234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               8-258
               

               Cow position:
               chr11:51144555-51144793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 34
               

               Conread position:
               8-268
               

               Cow position:
               chr11:58588185-58588435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               255, 34
               

               Conread position:
               8-270
               

               Cow position:
               chr11:12111628-12111366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               8-270
               

               Cow position:
               chr11:76606521-76606765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               256, 35
               

               Conread position:
               8-284
               

               Cow position:
               chr11:5031937-5031670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               256, 108
               

               Conread position:
               8-284
               

               Cow position:
               chr11:18698715-18698985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 34
               

               Conread position:
               8-286
               

               Cow position:
               chr11:82108057-82107793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               8-288
               

               Cow position:
               chr11:22978027-22977764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-288
               

               Cow position:
               chr11:42296780-42296509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               256, 36
               

               Conread position:
               8-290
               

               Cow position:
               chr11:27913111-27913398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               38, 71
               

               Conread position:
               8-290
               

               Cow position:
               chr11:39462466-39462736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               114, 65
               

               Conread position:
               8-290
               

               Cow position:
               chr11:78381219-78380952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               11, 54
               

               Conread position:
               8-294
               

               Cow position:
               chr11:32693634-32693368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               258, 79
               

               Conread position:
               8-295
               

               Cow position:
               chr11:53147702-53147413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               8-296
               

               Cow position:
               chr11:30708336-30708622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               33, 130
               

               Conread position:
               8-296
               

               Cow position:
               chr11:69844206-69844485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               254, 102
               

               Conread position:
               8-296
               

               Cow position:
               chr11:84385800-84385520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 123
               

               Conread position:
               8-302
               

               Cow position:
               chr11:48474540-48474828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 102
               

               Conread position:
               8-312
               

               Cow position:
               chr11:17278828-17278540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               8-313
               

               Cow position:
               chr11:29947090-29946778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 18
               

               Conread position:
               8-317
               

               Cow position:
               chr11:40479017-40478714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 116
               

               Conread position:
               8-318
               

               Cow position:
               chr11:48649822-48650111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               256, 7
               

               Conread position:
               8-331
               

               Cow position:
               chr11:58990347-58990650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               253, 60
               

               Conread position:
               9-175
               

               Cow position:
               chr11:77207886-77208043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               9-190
               

               Cow position:
               chr11:62979319-62979506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 127
               

               Conread position:
               9-201
               

               Cow position:
               chr11:41134227-41134039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               9-215
               

               Cow position:
               chr11:22932136-22931930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               9-216
               

               Cow position:
               chr11:33349860-33349659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               9-220
               

               Cow position:
               chr11:8495878-8496079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               9-221
               

               Cow position:
               chr11:30764321-30764537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               9-251
               

               Cow position:
               chr11:49231715-49231946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               9-264
               

               Cow position:
               chr11:60143460-60143218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               132, 11
               

               Conread position:
               9-265
               

               Cow position:
               chr11:3833513-3833276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               107, 23
               

               Conread position:
               9-267
               

               Cow position:
               chr11:50951392-50951653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               9-270
               

               Cow position:
               chr11:18484326-18484096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               255, 34
               

               Conread position:
               9-285
               

               Cow position:
               chr11:55761718-55761973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               9-289
               

               Cow position:
               chr11:77705599-77705862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               255, 28
               

               Conread position:
               9-290
               

               Cow position:
               chr11:7873986-7874251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               253, 48
               

               Conread position:
               9-290
               

               Cow position:
               chr11:41986206-41985933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 56
               

               Conread position:
               9-292
               

               Cow position:
               chr11:36194132-36194411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               9-294
               

               Cow position:
               chr11:4674609-4674326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               76, 117
               

               Conread position:
               9-294
               

               Cow position:
               chr11:17889888-17889612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               33, 90
               

               Conread position:
               9-294
               

               Cow position:
               chr11:35580096-35580376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               107, 33
               

               Conread position:
               9-294
               

               Cow position:
               chr11:45646756-45646476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               108, 37
               

               Conread position:
               9-296
               

               Cow position:
               chr11:37804716-37804435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 61
               

               Conread position:
               9-296
               

               Cow position:
               chr11:42836122-42835832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 71
               

               Conread position:
               9-299
               

               Cow position:
               chr11:18086501-18086226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               34, 75
               

               Conread position:
               9-304
               

               Cow position:
               chr11:72375847-72375549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 35
               

               Conread position:
               9-327
               

               Cow position:
               chr11:64904835-64905158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               153, 101
               

               Conread position:
               9-352
               

               Cow position:
               chr11:56518471-56518138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               9-356
               

               Cow position:
               chr11:12950108-12949760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 37
               

               Conread position:
               10-260
               

               Cow position:
               chr11:13040320-13040090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               10-283
               

               Cow position:
               chr11:65409315-65409051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               171, 35
               

               Conread position:
               10-290
               

               Cow position:
               chr11:59872771-59873040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 32
               

               Conread position:
               10-292
               

               Cow position:
               chr11:49148876-49149163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               220
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               28, 88
               

               Conread position:
               10-293
               

               Cow position:
               chr11:45434926-45435197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               162, 32
               

               Conread position:
               10-294
               

               Cow position:
               chr11:52381034-52380755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               254, 32
               

               Conread position:
               10-296
               

               Cow position:
               chr11:38236083-38236370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               10-296
               

               Cow position:
               chr11:63435357-63435639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 32
               

               Conread position:
               10-296
               

               Cow position:
               chr11:68910011-68909736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               109, 79
               

               Conread position:
               10-296
               

               Cow position:
               chr11:75480189-75479905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               87, 183
               

               Conread position:
               10-310
               

               Cow position:
               chr11:17831379-17831090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               10-330
               

               Cow position:
               chr11:36658978-36658669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 30
               

               Conread position:
               11-269
               

               Cow position:
               chr11:46952790-46953039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               12-161
               

               Cow position:
               chr11:77241213-77241357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               12-267
               

               Cow position:
               chr11:49934896-49934641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 214
               

               Conread position:
               13-182
               

               Cow position:
               chr11:47109812-47109981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               110, 29
               

               Conread position:
               13-190
               

               Cow position:
               chr11:48932742-48932571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               13-213
               

               Cow position:
               chr11:14094580-14094381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               114, 28
               

               Conread position:
               13-217
               

               Cow position:
               chr11:35450674-35450469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               13, 104
               

               Conread position:
               13-221
               

               Cow position:
               chr11:46580198-46580404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               13-262
               

               Cow position:
               chr11:43360945-43360700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               26, 156
               

               Conread position:
               13-267
               

               Cow position:
               chr11:63434213-63433970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               249, 32
               

               Conread position:
               13-268
               

               Cow position:
               chr11:55494522-55494770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               251, 31
               

               Conread position:
               13-275
               

               Cow position:
               chr11:30934266-30934514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               251, 88
               

               Conread position:
               13-285
               

               Cow position:
               chr11:51729131-51729394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 29
               

               Conread position:
               13-286
               

               Cow position:
               chr11:28993889-28993631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               13-286
               

               Cow position:
               chr11:71390721-71390457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               123, 33
               

               Conread position:
               13-289
               

               Cow position:
               chr11:2576061-2575792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               251, 29
               

               Conread position:
               13-289
               

               Cow position:
               chr11:55744318-55744579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               30, 59
               

               Conread position:
               13-292
               

               Cow position:
               chr11:21844290-21844024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 29
               

               Conread position:
               13-294
               

               Cow position:
               chr11:40458952-40459225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               13-294
               

               Cow position:
               chr11:66188478-66188202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               120, 29
               

               Conread position:
               13-294
               

               Cow position:
               chr11:76369678-76369402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               225, 29
               

               Conread position:
               13-307
               

               Cow position:
               chr11:36238626-36238908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 30
               

               Conread position:
               13-308
               

               Cow position:
               chr11:6202289-6202573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 31
               

               Conread position:
               13-308
               

               Cow position:
               chr11:17321503-17321779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               13-311
               

               Cow position:
               chr11:50072793-50073071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 29
               

               Conread position:
               13-330
               

               Cow position:
               chr11:56654391-56654716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 97
               

               Conread position:
               13-345
               

               Cow position:
               chr11:39115336-39115664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               128, 29
               

               Conread position:
               14-199
               

               Cow position:
               chr11:2309716-2309898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               167, 29
               

               Conread position:
               14-213
               

               Cow position:
               chr11:57170986-57170791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               14-289
               

               Cow position:
               chr11:14470213-14470477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               247, 87
               

               Conread position:
               14-293
               

               Cow position:
               chr11:27764999-27765268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 29
               

               Conread position:
               14-296
               

               Cow position:
               chr11:35347911-35347634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               39, 109
               

               Conread position:
               15-281
               

               Cow position:
               chr11:45631917-45631662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               249, 27
               

               Conread position:
               15-290
               

               Cow position:
               chr11:77745413-77745138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               28, 116
               

               Conread position:
               15-308
               

               Cow position:
               chr11:63917622-63917346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 63
               

               Conread position:
               15-342
               

               Cow position:
               chr11:5201805-5201486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               16-264
               

               Cow position:
               chr11:48306498-48306261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               16-291
               

               Cow position:
               chr11:81143705-81143428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 104
               

               Conread position:
               17-265
               

               Cow position:
               chr11:71806297-71806064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               17-294
               

               Cow position:
               chr11:32254372-32254099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               18-221
               

               Cow position:
               chr11:5211896-5211690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               21, 158
               

               Conread position:
               18-316
               

               Cow position:
               chr11:69075756-69076048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 24
               

               Conread position:
               18-322
               

               Cow position:
               chr11:70278261-70277970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 104
               

               Conread position:
               18-328
               

               Cow position:
               chr11:80761533-80761228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               15, 96
               

               Conread position:
               19-221
               

               Cow position:
               chr11:3920457-3920258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               20, 105
               

               Conread position:
               19-221
               

               Cow position:
               chr11:7497797-7497600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               19-223
               

               Cow position:
               chr11:42884929-42884738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               19-283
               

               Cow position:
               chr11:85294095-85294347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               206, 23
               

               Conread position:
               19-293
               

               Cow position:
               chr11:83925895-83926158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 114
               

               Conread position:
               19-294
               

               Cow position:
               chr11:41549487-41549216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               81, 14
               

               Conread position:
               19-298
               

               Cow position:
               chr11:66572653-66572375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               115, 144
               

               Conread position:
               19-301
               

               Cow position:
               chr11:33754056-33753788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 83
               

               Conread position:
               20-173
               

               Cow position:
               chr11:70824945-70825091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 50
               

               Conread position:
               21-184
               

               Cow position:
               chr11:65435704-65435864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               21-190
               

               Cow position:
               chr11:51626813-51626980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 100
               

               Conread position:
               21-220
               

               Cow position:
               chr11:53462793-53462989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               196, 88
               

               Conread position:
               21-263
               

               Cow position:
               chr11:86720561-86720334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               21-294
               

               Cow position:
               chr11:32055334-32055068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 98
               

               Conread position:
               21-295
               

               Cow position:
               chr11:5485860-5486132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               150, 102
               

               Conread position:
               21-296
               

               Cow position:
               chr11:45742232-45742492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               241, 47
               

               Conread position:
               21-298
               

               Cow position:
               chr11:32126461-32126733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               107, 58
               

               Conread position:
               22-290
               

               Cow position:
               chr11:23407313-23407577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               119, 21
               

               Conread position:
               22-296
               

               Cow position:
               chr11:64009570-64009843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               152, 88
               

               Conread position:
               23-287
               

               Cow position:
               chr11:49057255-49057501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               241, 19
               

               Conread position:
               24-204
               

               Cow position:
               chr11:85703559-85703732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               24-218
               

               Cow position:
               chr11:7458433-7458238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               24-221
               

               Cow position:
               chr11:47755531-47755340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               24-221
               

               Cow position:
               chr11:61560772-61560585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               24-223
               

               Cow position:
               chr11:84724508-84724703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               24-270
               

               Cow position:
               chr11:67246646-67246878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               240, 22
               

               Conread position:
               24-290
               

               Cow position:
               chr11:70836517-70836264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               238, 18
               

               Conread position:
               24-293
               

               Cow position:
               chr11:68112409-68112143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 20
               

               Conread position:
               24-296
               

               Cow position:
               chr11:30165363-30165628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               17, 89
               

               Conread position:
               24-296
               

               Cow position:
               chr11:51687872-51687610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               239, 86
               

               Conread position:
               24-297
               

               Cow position:
               chr11:54334185-54334448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               25-174
               

               Cow position:
               chr11:85764797-85764935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               25-220
               

               Cow position:
               chr11:32749966-32750157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 86
               

               Conread position:
               25-290
               

               Cow position:
               chr11:7460763-7460501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               26-296
               

               Cow position:
               chr11:63999234-63998973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               238, 16
               

               Conread position:
               27-220
               

               Cow position:
               chr11:21422079-21421891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               29-221
               

               Cow position:
               chr11:81281806-81282004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               101, 15
               

               Conread position:
               29-223
               

               Cow position:
               chr11:30720953-30721147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               29-272
               

               Cow position:
               chr11:16540721-16540957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               233, 15
               

               Conread position:
               29-312
               

               Cow position:
               chr11:19606434-19606711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               29, 55
               

               Conread position:
               30-170
               

               Cow position:
               chr11:10837669-10837530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               104, 12
               

               Conread position:
               30-288
               

               Cow position:
               chr11:66041131-66041389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               95, 196
               

               Conread position:
               30-315
               

               Cow position:
               chr11:69307359-69307651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               32, 96
               

               Conread position:
               31-294
               

               Cow position:
               chr11:42066721-42066981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               163, 12
               

               Conread position:
               32-270
               

               Cow position:
               chr11:70206184-70206411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               226, 36
               

               Conread position:
               32-290
               

               Cow position:
               chr11:48659793-48660047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               90, 11
               

               Conread position:
               32-292
               

               Cow position:
               chr11:52690661-52690407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               34-174
               

               Cow position:
               chr11:18399464-18399328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               35-173
               

               Cow position:
               chr11:4391163-4391298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               35-186
               

               Cow position:
               chr11:31526604-31526455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               35-214
               

               Cow position:
               chr11:57873693-57873864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               35-221
               

               Cow position:
               chr11:42003081-42002901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 99
               

               Conread position:
               35-221
               

               Cow position:
               chr11:76652886-76653066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               110, 25
               

               Conread position:
               35-238
               

               Cow position:
               chr11:21398829-21399026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               101, 35
               

               Conread position:
               35-289
               

               Cow position:
               chr11:70838429-70838178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 88
               

               Conread position:
               35-291
               

               Cow position:
               chr11:23251728-23251480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 75
               

               Conread position:
               35-293
               

               Cow position:
               chr11:70756345-70756594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 69
               

               Conread position:
               35-295
               

               Cow position:
               chr11:38334390-38334642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               229, 55
               

               Conread position:
               35-299
               

               Cow position:
               chr11:68913006-68913263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               221, 77
               

               Conread position:
               35-302
               

               Cow position:
               chr11:59024490-59024236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               229, 75
               

               Conread position:
               36-290
               

               Cow position:
               chr11:62788993-62789244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               106, 76
               

               Conread position:
               37-290
               

               Cow position:
               chr11:39118618-39118870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               219, 181
               

               Conread position:
               38-285
               

               Cow position:
               chr11:71807704-71807459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               74, 95
               

               Conread position:
               38-292
               

               Cow position:
               chr11:62742766-62742531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               226, 25
               

               Conread position:
               39-216
               

               Cow position:
               chr11:485763-485587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               39-217
               

               Cow position:
               chr11:83000667-83000487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               87, 81
               

               Conread position:
               39-290
               

               Cow position:
               chr11:67615061-67614808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               75, 188
               

               Conread position:
               39-298
               

               Cow position:
               chr11:40608730-40608475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               6, 83
               

               Conread position:
               40-332
               

               Cow position:
               chr11:64868146-64867869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 79
               

               Conread position:
               41-308
               

               Cow position:
               chr11:47772522-47772260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               99, 28
               

               Conread position:
               44-302
               

               Cow position:
               chr11:47837186-47837444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               45-187
               

               Cow position:
               chr11:27719449-27719306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               45-283
               

               Cow position:
               chr11:33345317-33345551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               78, 88
               

               Conread position:
               48-290
               

               Cow position:
               chr11:7385306-7385551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               39, 90
               

               Conread position:
               48-300
               

               Cow position:
               chr11:372818-372588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               216, 31
               

               Conread position:
               48-317
               

               Cow position:
               chr11:41293942-41293680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               23, 73
               

               Conread position:
               49-270
               

               Cow position:
               chr11:31506722-31506942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               55, 179
               

               Conread position:
               49-331
               

               Cow position:
               chr11:14466610-14466338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               215, 6
               

               Conread position:
               50-292
               

               Cow position:
               chr11:35536462-35536701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               21, 66
               

               Conread position:
               50-294
               

               Cow position:
               chr11:47311106-47310867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               212, 60
               

               Conread position:
               50-306
               

               Cow position:
               chr11:63920170-63919925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               214, 51
               

               Conread position:
               51-292
               

               Cow position:
               chr11:26275078-26274848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               52-296
               

               Cow position:
               chr11:375335-375578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               53, 159
               

               Conread position:
               58-299
               

               Cow position:
               chr11:72333479-72333710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               206, 62
               

               Conread position:
               59-262
               

               Cow position:
               chr11:17036642-17036444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 65
               

               Conread position:
               60-309
               

               Cow position:
               chr11:18587719-18587463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               68, 175
               

               Conread position:
               61-283
               

               Cow position:
               chr11:84890833-84890612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 164
               

               Conread position:
               64-254
               

               Cow position:
               chr11:75965757-75965576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               64-284
               

               Cow position:
               chr11:30210799-30211011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               49, 57
               

               Conread position:
               64-285
               

               Cow position:
               chr11:6194300-6194504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               66-321
               

               Cow position:
               chr11:4653083-4652829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 159
               

               Conread position:
               66-323
               

               Cow position:
               chr11:71341571-71341319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               198, 66
               

               Conread position:
               71-224
               

               Cow position:
               chr11:12368596-12368750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               75-299
               

               Cow position:
               chr11:64406129-64406349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               213, 144
               

               Conread position:
               78-272
               

               Cow position:
               chr11:48512063-48512258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               80-292
               

               Cow position:
               chr11:62813041-62812835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               80-298
               

               Cow position:
               chr11:4199181-4199391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               184, 52
               

               Conread position:
               81-289
               

               Cow position:
               chr11:35803043-35803250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               40, 60
               

               Conread position:
               82-330
               

               Cow position:
               chr11:66518400-66518638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               182, 56
               

               Conread position:
               83-318
               

               Cow position:
               chr11:62778358-62778582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               181, 40
               

               Conread position:
               86-284
               

               Cow position:
               chr11:27565250-27565437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               184, 31
               

               Conread position:
               87-325
               

               Cow position:
               chr11:22747414-22747184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               83, 19
               

               Conread position:
               90-287
               

               Cow position:
               chr11:41313738-41313547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               174, 39
               

               Conread position:
               92-270
               

               Cow position:
               chr11:18785951-18785785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               92-296
               

               Cow position:
               chr11:56575845-56575642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               93-296
               

               Cow position:
               chr11:17721883-17721684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               95-294
               

               Cow position:
               chr11:36920656-36920459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               113-310
               

               Cow position:
               chr11:67312721-67312913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               151, 27
               

               Conread position:
               120-330
               

               Cow position:
               chr11:62609550-62609757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               141, 103
               

               Conread position:
               120-340
               

               Cow position:
               chr11:83579231-83579014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               123-291
               

               Cow position:
               chr11:39855067-39854904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               123-331
               

               Cow position:
               chr11:34692802-34693007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               141, 103
               

               Conread position:
               128-316
               

               Cow position:
               chr11:4430179-4429998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               133-283
               

               Cow position:
               chr11:7307590-7307738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               129, 81
               

               Conread position:
               133-290
               

               Cow position:
               chr11:35669993-35669840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               131, 90
               

               Conread position:
               133-320
               

               Cow position:
               chr11:56290470-56290654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               152
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               131, 90
               

               Conread position:
               133-322
               

               Cow position:
               chr11:30888324-30888135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               92, 54
               

               Conread position:
               134-300
               

               Cow position:
               chr11:29786539-29786376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               126, 89
               

               Conread position:
               137-298
               

               Cow position:
               chr11:46427445-46427287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               127, 89
               

               Conread position:
               138-270
               

               Cow position:
               chr11:61130701-61130574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               126, 10
               

               Conread position:
               138-298
               

               Cow position:
               chr11:30272967-30272819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               126, 51
               

               Conread position:
               138-320
               

               Cow position:
               chr11:71345360-71345181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               126, 88
               

               Conread position:
               138-323
               

               Cow position:
               chr11:58173589-58173770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               152
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               126, 63
               

               Conread position:
               138-330
               

               Cow position:
               chr11:79019095-79018906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               126, 88
               

               Conread position:
               140-290
               

               Cow position:
               chr11:897639-897785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 83
               

               Conread position:
               142-295
               

               Cow position:
               chr11:62168363-62168214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               122, 83
               

               Conread position:
               146-296
               

               Cow position:
               chr11:43914263-43914410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 77
               

               Conread position:
               149-307
               

               Cow position:
               chr11:32782909-32782754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 77
               

               Conread position:
               150-301
               

               Cow position:
               chr11:47784750-47784898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               113, 73
               

               Conread position:
               154-283
               

               Cow position:
               chr11:15683000-15682874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               110, 69
               

               Conread position:
               154-296
               

               Cow position:
               chr11:49207691-49207826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               110, 8
               

               Conread position:
               154-316
               

               Cow position:
               chr11:84775054-84775211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               108, 69
               

               Conread position:
               156-299
               

               Cow position:
               chr11:66099881-66099741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               108, 67
               

               Conread position:
               156-337
               

               Cow position:
               chr11:30805149-30804976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               157-300
               

               Cow position:
               chr11:18792085-18791946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               159-305
               

               Cow position:
               chr11:30320787-30320933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 71
               

               Conread position:
               161-300
               

               Cow position:
               chr11:16796211-16796346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 65
               

               Conread position:
               163-302
               

               Cow position:
               chr11:47110241-47110373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 24
               

               Conread position:
               164-286
               

               Cow position:
               chr11:81728659-81728540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               164-291
               

               Cow position:
               chr11:47164929-47164808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               164-295
               

               Cow position:
               chr11:46452127-46452253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               100, 7
               

               Conread position:
               164-302
               

               Cow position:
               chr11:41983177-41983041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               97, 59
               

               Conread position:
               164-302
               

               Cow position:
               chr11:74720714-74720848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               164-303
               

               Cow position:
               chr11:70639835-70639970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               100, 54
               

               Conread position:
               166-321
               

               Cow position:
               chr11:74378866-74379017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 61
               

               Conread position:
               168-316
               

               Cow position:
               chr11:59916140-59916286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 5
               

               Conread position:
               170-296
               

               Cow position:
               chr11:29482440-29482317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 53
               

               Conread position:
               177-306
               

               Cow position:
               chr11:79466214-79466339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 45
               

               Conread position:
               177-315
               

               Cow position:
               chr11:4436750-4436885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               87, 50
               

               Conread position:
               177-318
               

               Cow position:
               chr11:35860585-35860720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               87, 21
               

               Conread position:
               177-353
               

               Cow position:
               chr11:36066006-36065831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 42
               

               Conread position:
               180-337
               

               Cow position:
               chr11:56895969-56895816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               84, 43
               

               Conread position:
               182-328
               

               Cow position:
               chr11:64951834-64951972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               77, 16
               

               Conread position:
               182-340
               

               Cow position:
               chr11:47904126-47904292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               226-330
               

               Cow position:
               chr11:35476628-35476524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               38, 47
               
Show alignments to all cow chromosomes.
Conread position:	1-95
Cow position:	chr11:19577464-19577559 (view UCSC Genome Browser custom track)
Alignm length:	96
Alignm identity:	81
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	35, 0
Conread position:	1-156
Cow position:	chr11:43914040-43914197 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	123
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	9, 133
Conread position:	1-162
Cow position:	chr11:49105884-49106045 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	121
Alignm E-value:	5e-23
Alignm gaps (pig, cow):	43, 118
Conread position:	1-170
Cow position:	chr11:21830522-21830352 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	126
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	126, 41
Conread position:	1-173
Cow position:	chr11:47586518-47586351 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	129
Alignm E-value:	8e-27
Alignm gaps (pig, cow):	91, 0
Conread position:	1-177
Cow position:	chr11:30110794-30110965 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	132
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	20, 12
Conread position:	1-199
Cow position:	chr11:70459401-70459588 (view UCSC Genome Browser custom track)
Alignm length:	199
Alignm identity:	140
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	40, 0
Conread position:	1-206
Cow position:	chr11:21428162-21427961 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	165
Alignm E-value:	0
Alignm gaps (pig, cow):	12, 0
Conread position:	1-216
Cow position:	chr11:36981394-36981605 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	152
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	8, 96
Conread position:	1-218
Cow position:	chr11:9463661-9463879 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	157
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	7, 111
Conread position:	1-220
Cow position:	chr11:3726115-3726335 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	161
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	7, 131
Conread position:	1-221
Cow position:	chr11:31525696-31525925 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	160
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	7, 0
Conread position:	1-223
Cow position:	chr11:30120835-30120613 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	166
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	126, 41
Conread position:	1-254
Cow position:	chr11:48383357-48383596 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	178
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	40, 111
Conread position:	1-262
Cow position:	chr11:23128713-23128456 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	192
Alignm E-value:	3e-40
Alignm gaps (pig, cow):	13, 42
Conread position:	1-264
Cow position:	chr11:38638947-38639197 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	190
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	12, 46
Conread position:	1-270
Cow position:	chr11:36799472-36799215 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	198
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	215, 115
Conread position:	1-271
Cow position:	chr11:64638705-64638432 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	211
Alignm E-value:	5.04467e-44
Alignm gaps (pig, cow):	9, 117
Conread position:	1-273
Cow position:	chr11:40258581-40258314 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	195
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	41, 112
Conread position:	1-276
Cow position:	chr11:18572632-18572899 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	200
Alignm E-value:	3.99931e-42
Alignm gaps (pig, cow):	259, 41